Gene
| Gene Model ID | habu1_s2347_g08524 |
|---|---|
| Locus | habu1_scaffold2347 : 861111 ... 889668 : - |
| To GenomeBrowser | habu1_scaffold2347:861111..889668 |
| Genes list of scaffold | habu1_scaffold2347 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sh3 and cysteine-rich domain-containing protein 3 | GO:0003009 GO:0007274 GO:0035556 GO:0042802 GO:0046872 GO:0048741 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2347_g08524.t2 | 1 | 1 | C1_1 | 76 | 122 | 3.1e-08 | 33.2 | 2.1e-11 | 5.1e-08 | 32.5 |
| habu1_s2347_g08524.t2 | 1 | 1 | SH3_1 | 234 | 282 | 3.0e-14 | 52.1 | 9.4e-17 | 2.3e-13 | 49.2 |
| habu1_s2347_g08524.t2 | 1 | 1 | SH3_9 | 235 | 286 | 2.5e-13 | 49.3 | 9.9e-13 | 2.4e-09 | 36.6 |
| habu1_s2347_g08524.t2 | 2 | 1 | SH3_2 | 237 | 285 | 5.9e-15 | 54.4 | 2.8e-09 | 6.9e-06 | 25.4 |
| habu1_s2347_g08524.t2 | 2 | 2 | SH3_2 | 297 | 349 | 5.9e-15 | 54.4 | 5.5e-10 | 1.4e-06 | 27.7 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.5 |
| Venom grand-1 | 16.0 |
| Pit, infrared sensing | 3.2 |
| Nose | 0.2 |
| Brain-1 | 0.1 |
| Eye | 0.9 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 1.5 |
| Brain-2 | 0.0 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.1 |
| cheek muscle | 193.0 |
Transcript
| Transcript ID | habu1_s2347_g08524.t1 |
|---|---|
| Definition | - |
>habu1_s2347_g08524.t1 tttacatcttgagccccaaaaggaaaattgaatttatctttggcagatctgtaaaagatctgttggggagaagagaagag agcggagtttgggacagtttgggaaagataccattaacaggagtacctcctttcttttagaaatatgacagaaaaagaga ttcttgagccatcagcttcacccacgtctataagggggaaatctccagaagggttgcagaagctaaagcagtttttccaa cgcaagcccatggaggaggagcctaccacagaggagccacaagccaacggggagctggtcagctcttcagggggacccat ctactactatgaggaagtggaggaggaggaagaagagcctgagctgccacctgagccggaaagaccagttaacgataaac ctcacaagttcaaggatcactacttcaagaaacctaagttttgtgatgtctgtgcccgcatgattgtcctcaacaacaaa tatggcttgaaatgcaagaactgcaaaactcacatccatcatcactgccaaagttatgtggaatttcagcgctgttttgg caaaatacctccaggtttccgccgtgcttacagttctccgttgtacagtgcccaacaactctcaggtgctaaccgaaatg atcctgtcttcgataccctacggtcaggtgtcatcatggcaaacaaggagcgcaagaaagggcaggataacaaaaaaaat cctttggctgccatgatggaagaagaaacagaagcccccaaaccagaaagtgacaaaccagagggaggaaatccagaggg acagaaagcagagaagaataccccggatgacaagagtaagaagcagcaaactggattcccacagtctcactactttattg cactttatcgcttcaaagccttggagaaggatgacttggatttccaccctggggacaaaattgcaattgttgatgactcc aatgaagaatggtggcgggggaagaaaattggggagattggagaaaaaattggatactttccacccaacttcattatccg agtgcgtgcaggagaacgtgtgcataaggtcatgaggtccttcgtgggcaacaaagaaatcggtcagattacattaaaaa aggatcagattgtggtgcagaaaggagaggagctgaatgggtatgtcaaagtctacactggccgcaaagtggggctcttt cccgttgacttcttgcaggagatctgaggtccaaccctggcaattcacaagggtttcatacccaaggccagagtgttttt aagtgttcattgccagctgccaatgcctctctgcaaggaagctgcgttctgcaggtctgtggtccaagaactaagacatc acacgaagaaggcctgtgtcagtgagccaggattcaaggcaagaagcatacctatctgccaccggagaggactccgtgct tcacttgaactctgcaatttgctgctggcagattccagaacaggctcagccgttgtccctttatgatcttgccaaggagg gatgcggccaaagctgctctacttcttgtctgcaaagaaagtagcgattggacagattgattgacagaactgacaaagag ttactgttaggctgcactaacatgtgcatggatttacttcaggatatgactgtccctttgctggcagagggggagcctgg ctcctagtttacttggatggcttagattcaattatgttttgccaatatctgttacccttttctatccctcacttgtctat ctgtgctgatataaagcagcaagtttttggattaata |
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| Transcript ID | habu1_s2347_g08524.t2 |
| Definition | - |
>habu1_s2347_g08524.t2 tttacatcttgagccccaaaaggaaaattgaatttatctttggcagatctgtaaaagatctgttggggagaagagaagag agcggagtttgggacagtttgggaaagataccattaacaggagtacctcctttcttttagaaatatgacagaaaaagaga ttcttgagccatcagcttcacccacgtctataagggggaaatctccagaagggcccatggaggaggagcctaccacagag gagccacaagccaacggggagctggtcagctcttcagggggacccatctactactatgaggaagtggaggaggaggaaga agagcctgagctgccacctgagccggaaagaccagttaacgataaacctcacaagttcaaggatcactacttcaagaaac ctaagttttgtgatgtctgtgcccgcatgattgtcctcaacaacaaatatggcttgaaatgcaagaactgcaaaactcac atccatcatcactgccaaagttatgtggaatttcagcgctgttttggcaaaatacctccaggtttccgccgtgcttacag ttctccgttgtacagtgcccaacaactctcaggtgctaaccgaaatgatcctgtcttcgataccctacggtcaggtgtca tcatggcaaacaaggagcgcaagaaagggcaggataacaaaaaaaatcctttggctgccatgatggaagaagaaacagaa gcccccaaaccagaaagtgacaaaccagagggaggaaatccagagggacagaaagcagagaagaataccccggatgacaa gagtaagaagcagcaaactggattcccacagtctcactactttattgcactttatcgcttcaaagccttggagaaggatg acttggatttccaccctggggacaaaattgcaattgttgatgactccaatgaagaatggtggcgggggaagaaaattggg gagattggagaaaaaattggatactttccacccaacttcattatccgagtgcgtgcaggagaacgtgtgcataaggtcat gaggtccttcgtgggcaacaaagaaatcggtcagattacattaaaaaaggatcagattgtggtgcagaaaggagaggagc tgaatgggtatgtcaaagtctacactggccgcaaagtggggctctttcccgttgacttcttgcaggagatctgaggtcca accctggcaattcacaagggtttcatacccaaggccagagtgtttttaagtgttcattgccagctgccaatgcctctctg caaggaagctgcgttctgcaggtctgtggtccaagaactaagacatcacacgaagaaggcctgtgtcagtgagccaggat tcaaggcaagaagcatacctatctgccaccggagaggactccgtgcttcacttgaactctgcaatttgctgctggcagat tccagaacaggctcagccgttgtccctttatgatcttgccaaggagggatgcggccaaagctgctctacttcttgtctgc aaagaaagtagcgattggacagattgattgacagaactgacaaagagttactgttaggctgcactaacatgtgcatggat ttacttcaggatatgactgtccctttgctggcagagggggagcctggctcctagtttacttggatggcttagattcaatt atgttttgccaatatctgttacccttttctatccctcacttgtctatctgtgctgatataaagcagcaagtttttggatt aata |
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Protein
| Protein ID | habu1_s2347_g08524.t1 |
|---|---|
| Definition | - |
>habu1_s2347_g08524.t1 MTEKEILEPSASPTSIRGKSPEGLQKLKQFFQRKPMEEEPTTEEPQANGELVSSSGGPIYYYEEVEEEEEEPELPPEPER PVNDKPHKFKDHYFKKPKFCDVCARMIVLNNKYGLKCKNCKTHIHHHCQSYVEFQRCFGKIPPGFRRAYSSPLYSAQQLS GANRNDPVFDTLRSGVIMANKERKKGQDNKKNPLAAMMEEETEAPKPESDKPEGGNPEGQKAEKNTPDDKSKKQQTGFPQ SHYFIALYRFKALEKDDLDFHPGDKIAIVDDSNEEWWRGKKIGEIGEKIGYFPPNFIIRVRAGERVHKVMRSFVGNKEIG QITLKKDQIVVQKGEELNGYVKVYTGRKVGLFPVDFLQEI |
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| Protein ID | habu1_s2347_g08524.t2 |
| Definition | - |
>habu1_s2347_g08524.t2 MTEKEILEPSASPTSIRGKSPEGPMEEEPTTEEPQANGELVSSSGGPIYYYEEVEEEEEEPELPPEPERPVNDKPHKFKD HYFKKPKFCDVCARMIVLNNKYGLKCKNCKTHIHHHCQSYVEFQRCFGKIPPGFRRAYSSPLYSAQQLSGANRNDPVFDT LRSGVIMANKERKKGQDNKKNPLAAMMEEETEAPKPESDKPEGGNPEGQKAEKNTPDDKSKKQQTGFPQSHYFIALYRFK ALEKDDLDFHPGDKIAIVDDSNEEWWRGKKIGEIGEKIGYFPPNFIIRVRAGERVHKVMRSFVGNKEIGQITLKKDQIVV QKGEELNGYVKVYTGRKVGLFPVDFLQEI |
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