Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2347_g08530
Locus habu1_scaffold2347 : 1333979 ... 1344426 : -
To GenomeBrowser habu1_scaffold2347:1333979..1344426
Genes list of scaffold habu1_scaffold2347

Annotation by Blast2GO
Annotation GO
dna damage-inducible transcript 3 protein GO:0005488 GO:0006355 GO:0006915 GO:0007165 GO:0007275 GO:0034976 GO:0048522 GO:0048523

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 9.8
Venom grand-1 36.2
Pit, infrared sensing 13.5
Nose 19.1
Brain-1 4.4
Eye 8.8
fetal fibroblast 13.7
venom gland-2 30.6
Brain-2 3.9
Spleen 5.2
Lung 9.6
Liver 4.0
Kidney 2.9
Pancreas 8.8
Small intestine 7.9
Large intestine 8.6
Stomach 7.1
heart 4.6
ovary 7.2
cheek muscle 5.0

Transcript
Transcript IDhabu1_s2347_g08530.t1
Definition-
>habu1_s2347_g08530.t1
ggcggaggctatctgtgttccgccaatggaaaggcgcgacgtcgccaattggccagatatggcgcaagggtttcgtcatg
ccgaggggcggggcgctcttttaaagatttctgtgaccatccggagcaggaggtgggaggaggcatttggaagccggcgg
gtgtcgagagcggaagacgatgagccgtgagaggagaatgagccgtagccagcaaattggagagaggatcgcgggcgaga
aggggccgcgtaggaagtttcgaacaaaaaatcgcacattaatacatcaccacacttgaaaaaaagaagcagtgtggcta
tttctgaaccatgatggcagaatccctgcccttttcactgggcacaccagtgcccacctgggaattggaagcctggtacg
aggacttgcaggaagtgctgtcctcggatgtatccaacaggacagacccctctgggggcggacaggagcagagggaattt
gatggctttgatggtgctgctctgttgtggaacttggagacttccaattccttggagcttgatggggatatagtggcagg
aaactacgagttggagcctgatcttacagcagaacttttggagcaactgggcaaggagcccccagggccagctgaatccg
attctagccatggttctcctacacagacaggtactgatgacgatgaagggatgtctactggccggaagaggcggcagagt
ggccagcctcacggtggcaagagacggcgcggcagagagcgggagcagcagaatgagcgcagagtggctgagctcacagc
acataatgagcacctccagcaagaaatacagcgcttgagcgctgaggtggaagctacacgagcagcgctcatccagcgga
tggtgagcctaaagacatgatgggttccgggaacactttctgcactgaaattatttctccttcctacggaccaaagtgtg
cagggcttcatcctttccggattgagtgactgtgccgcacgctgaaaggaggggcacttgttgacaccttaaaacacatc
ggtgccctgcaacactttgaacttgaaaaacttgttcctactctggacttcccttacagaactgtactatgtgtggccca
gttattttaggcaaagaggagatccctgactttcctagagactgactgtggcagtcgtgcaactgacttgttcttaatag
ttatctgttcttgtccttgcgtggagatgcagggagggatgtctgcgtgtatcgttccatataacagtgcttttgtactt
gtataaagaacaataaagtatttattttgtccggtgtaa
Transcript IDhabu1_s2347_g08530.t2
Definition-
>habu1_s2347_g08530.t2
ggcggaggctatctgtgttccgccaatggaaaggcgcgacgtcgccaattggccagatatggcgcaagggtttcgtcatg
ccgaggggcggggcgctcttttaaagatttctgtgaccatccggagcaggaggtgggaggaggcatttggaagccggcgg
gtgtcgagagcggaagacgatgagccgtgagaggagaatgagccgtagccagcaaattggagagaggatcgcgggcgaga
aggggccgcgtaggaagtttcgaacaaaaaatcgcacattaatacatcaccacacttgaaaaaaagaagcagtgtggcta
tttctgaaccatgatggcagaatccctgcccttttcactgggcacaccagtgcccacctgggaattggaagcctggtacg
aggacttgcaggaagtgctgtcctcggatgtatccaacaggacagacccctctgggggcggacaggagcagagggaattt
gatggctttgatggtgctgctctgttgtggaacttggagacttccaattccttggagcttgatggggatatagtggcagg
aaactacgagttggagcctgatcttacagcagaacttttggagcaactgggcaaggagcccccagggccagctgaatccg
attctagccatggttctcctacacagacaggtactgatgacgatgaagggatgtctactggccggaagaggcggcagagt
ggccagcctcacggtggcaagagacggcgcggcagagagcgggagcagcagaatgagcgcagagtggctgagctcacagc
acataatgagcacctccagcaagaaatacagcgcttgagcgctgaggtggaagctacacgagcagcgctcatccagcgga
tggtgagcctaaagacatgatgggttccgggaacactttctgcactgaaattatttctccttcctacggaccaaagtgtg
cagggcttcatcctttccggattgagtgactgtgccgcacgctgaaaggaggggcacttgttgacaccttaaaacacatc
ggtgccctgcaacactttgaacttgaaa

Protein
Protein IDhabu1_s2347_g08530.t1
Definition-
>habu1_s2347_g08530.t1
MMAESLPFSLGTPVPTWELEAWYEDLQEVLSSDVSNRTDPSGGGQEQREFDGFDGAALLWNLETSNSLELDGDIVAGNYE
LEPDLTAELLEQLGKEPPGPAESDSSHGSPTQTGTDDDEGMSTGRKRRQSGQPHGGKRRRGREREQQNERRVAELTAHNE
HLQQEIQRLSAEVEATRAALIQRMVSLKT
Protein IDhabu1_s2347_g08530.t2
Definition-
>habu1_s2347_g08530.t2
MMAESLPFSLGTPVPTWELEAWYEDLQEVLSSDVSNRTDPSGGGQEQREFDGFDGAALLWNLETSNSLELDGDIVAGNYE
LEPDLTAELLEQLGKEPPGPAESDSSHGSPTQTGTDDDEGMSTGRKRRQSGQPHGGKRRRGREREQQNERRVAELTAHNE
HLQQEIQRLSAEVEATRAALIQRMVSLKT

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Okinawa Institute of Science and Technology
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