Gene
| Gene Model ID | habu1_s2347_g08532 |
|---|---|
| Locus | habu1_scaffold2347 : 1373862 ... 1428819 : - |
| To GenomeBrowser | habu1_scaffold2347:1373862..1428819 |
| Genes list of scaffold | habu1_scaffold2347 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dynactin subunit 2 isoform x3 | GO:0000776 GO:0005813 GO:0005869 GO:0007017 GO:0007067 GO:0008091 GO:0008283 GO:0030426 GO:0030507 GO:0032402 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2347_g08532.t1 | 1 | 1 | Dynamitin | 21 | 411 | 0.0 | 436.2 | 0.0 | 0.0 | 436.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2347_g08532.t1 | gi|602630411|ref|XP_007422121.1| | PREDICTED: dynactin subunit 2 isoform X3 [Python bivittatus] | 0.0 |
| habu1_s2347_g08532.t1 | gi|602630409|ref|XP_007422120.1| | PREDICTED: dynactin subunit 2 isoform X2 [Python bivittatus] | 0.0 |
| habu1_s2347_g08532.t1 | gi|602630407|ref|XP_007422119.1| | PREDICTED: dynactin subunit 2 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s2347_g08532.t1 | gi|327277878|ref|XP_003223690.1| | PREDICTED: dynactin subunit 2 isoform X3 [Anolis carolinensis] | 0.0 |
| habu1_s2347_g08532.t1 | gi|327277882|ref|XP_003223692.1| | PREDICTED: dynactin subunit 2 isoform X2 [Anolis carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 22.9 |
| Venom grand-1 | 47.7 |
| Pit, infrared sensing | 24.2 |
| Nose | 30.5 |
| Brain-1 | 32.7 |
| Eye | 32.2 |
| fetal fibroblast | 40.2 |
| venom gland-2 | 36.2 |
| Brain-2 | 42.7 |
| Spleen | 33.0 |
| Lung | 43.0 |
| Liver | 55.2 |
| Kidney | 60.4 |
| Pancreas | 92.5 |
| Small intestine | 50.7 |
| Large intestine | 42.3 |
| Stomach | 57.7 |
| heart | 31.6 |
| ovary | 33.6 |
| cheek muscle | 59.9 |
Transcript
| Transcript ID | habu1_s2347_g08532.t1 |
|---|---|
| Definition | - |
>habu1_s2347_g08532.t1 gtggcttcaacccatccctgcacctggctatggccgatcccaagtatgcggacctgcccggcattgccaggaatgagcct gatgtttatgaaacaagtgacctccctgaagatgatcaagcagaatttgatgcggaggagctaactagcaccagtgtgga acacatcatagtcaaccctaatgcagcttatgacaagtttaaggacaagagagtgggtactaaagggctagatttctctg atcgtattggcaaatccaaaagaactggctacgagtctggagattatgaaattttaggagaaggacttcatgcgaaagag acccctcagcagaaatatcagcgactactgcatgaagttcaggagctgactgctgaagtggagaagatcaagaacagcgt aaaggagtcctcagcagaggagaaactgacaccagtcgctcttgcaaaacaagtggctggcctgaaacagcagctggtct ccacccatctggagaaactgttgggaccagaggcggccatcaacttaacggaccctgatggtgctctggccaagcgtttg cttcttcaactggaagcaacaaaaactgctaaaagcgtttctgctggtgggaaaggtgcggccaaagtcccagcgggccc agaaaacaccgtgacatacgaactgcattctcgacctgagcaagacaagttctctcaagctgctaaaatagcagaattgg agaagcgtctggctgaattggaagtgtcggttcgttgtgaacaggatgtgcagaatcctctgtctgttggactgcagggc gctagcttaatggaaactgtggaactcttgcaggccaaagtcaactccttagatgtggcaactctggaccaggtggaggc aaggctacagagtgttttgggaaaggtgaatgagattgccaagcacaaagccacagtagaggacgcagacacccaaagca aggttcatcagctgtatgcacttgtgcaggagtggagtccactggctagcaccctccctgaggtggtgcagcgcctagtt gctgtgcggcagttgcatgaacaagccatgcaatttgggcagctcctgactcatttggacactacccagcaaatgattgc taattctctgaaggataacgtaaccctgctgacacaggtccagaaagctatgaaagagaatctagctgctgtggaagaca attttgccagcatcaactcacgggtacagaagctggccaaataaatctccttaacagaaaggcagggttggaagatttgc ccactctgtaaacacacactaattgctctgtcctttccctacctttgtcccttttcttgcacattcatagcaggagttga accttcctacaggccagaggactgagcgcttctatgttaaaaggcagctgtgcccctccctcctcccaatgtttttccat gtccctgaaggttgctggttgcagaggggaaagtggcacaccctagtggatggggaagctgtgtcctagtgagggagtca ctctttgcccatttcttgaggaaggtgcgctgcctctttggcccacaatgagggccttttacatggaaaggggtctttaa cgctctcagcatggagttgaattgtgttgtataattattttctgtcattaaactctgatgcttactgctttgtg |
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Protein
| Protein ID | habu1_s2347_g08532.t1 |
|---|---|
| Definition | - |
>habu1_s2347_g08532.t1 GFNPSLHLAMADPKYADLPGIARNEPDVYETSDLPEDDQAEFDAEELTSTSVEHIIVNPNAAYDKFKDKRVGTKGLDFSD RIGKSKRTGYESGDYEILGEGLHAKETPQQKYQRLLHEVQELTAEVEKIKNSVKESSAEEKLTPVALAKQVAGLKQQLVS THLEKLLGPEAAINLTDPDGALAKRLLLQLEATKTAKSVSAGGKGAAKVPAGPENTVTYELHSRPEQDKFSQAAKIAELE KRLAELEVSVRCEQDVQNPLSVGLQGASLMETVELLQAKVNSLDVATLDQVEARLQSVLGKVNEIAKHKATVEDADTQSK VHQLYALVQEWSPLASTLPEVVQRLVAVRQLHEQAMQFGQLLTHLDTTQQMIANSLKDNVTLLTQVQKAMKENLAAVEDN FASINSRVQKLAK |
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