Gene
| Gene Model ID | habu1_s2370_g08593 |
|---|---|
| Locus | habu1_scaffold2370 : 13286 ... 26655 : - |
| To GenomeBrowser | habu1_scaffold2370:13286..26655 |
| Genes list of scaffold | habu1_scaffold2370 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2370_g08593.t1 | 2 | 1 | CTD_bind | 41 | 94 | 1.8e-16 | 60.1 | 5.5e-15 | 4.0e-11 | 42.9 |
| habu1_s2370_g08593.t1 | 2 | 2 | CTD_bind | 104 | 127 | 1.8e-16 | 60.1 | 8.7e-08 | 0.00064 | 19.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2370_g08593.t1 | gi|602663725|ref|XP_007437488.1| | PREDICTED: LOW QUALITY PROTEIN: regulation of nuclear pre-mRNA domain-containing protein 2 [Python bivittatus] | 0.0 |
| habu1_s2370_g08593.t1 | gi|637366608|ref|XP_008121242.1| | PREDICTED: LOW QUALITY PROTEIN: regulation of nuclear pre-mRNA domain-containing protein 2 [Anolis carolinensis] | 0.0 |
| habu1_s2370_g08593.t1 | gi|697437072|ref|XP_009687890.1| | PREDICTED: LOW QUALITY PROTEIN: regulation of nuclear pre-mRNA domain-containing protein 2, partial [Struthio camelus australis] | 0.0 |
| habu1_s2370_g08593.t1 | gi|729735669|ref|XP_010563869.1| | PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 2 [Haliaeetus leucocephalus] | 0.0 |
| habu1_s2370_g08593.t1 | gi|564269153|ref|XP_006273354.1| | PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 2 [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.4 |
| Venom grand-1 | 2.7 |
| Pit, infrared sensing | 2.4 |
| Nose | 2.3 |
| Brain-1 | 2.8 |
| Eye | 3.2 |
| fetal fibroblast | 2.8 |
| venom gland-2 | 2.6 |
| Brain-2 | 2.9 |
| Spleen | 2.1 |
| Lung | 4.5 |
| Liver | 4.6 |
| Kidney | 2.7 |
| Pancreas | 2.2 |
| Small intestine | 2.8 |
| Large intestine | 2.4 |
| Stomach | 1.4 |
| heart | 2.6 |
| ovary | 8.2 |
| cheek muscle | 3.2 |
Transcript
| Transcript ID | habu1_s2370_g08593.t1 |
|---|---|
| Definition | - |
>habu1_s2370_g08593.t1 tacgttgattgtgtcattgtttatttaaagattttcttcatcccaaaaaatgatccttgagtagtttgcaaaagagtgat tagatagttcctaccctcaaaagacgcaacacccaaagaaaatgggctgttgttttttgtttttaaatgctcttgaaaat cttcagcaccccgtccccacttggcgctcctcgtgccggctgggaacaatgggtgctgttatcccacagctccggcagcc ggaagagagctactggcttcgctcaccgactgaacctcttctacttggccaacgacgtcatacagaactgcaaaagaaaa aacgccatcatctttcgcgacacgtttgccgaagtgctgcctgaagccgctgcgttggtgaaagataaagttttaaaact tgtgtcagaaacagctcagaggctcttaacttggaaatacgacaaggatgctctgcgaagagatccctccgtctccaagt ctatagagaggattttcaaaatatgggaagacagaaatgtgtatccagaggaaaccgttaccgttctaaaagaagcttta aacaagaccggagggaagaagttctccaaggagtttgaggaggccagcgccaagctggaggagttcgtgaacagcctgga caagcaggtgaaggacggcccttcgctgacggaagtgctggagaacgcgggcatcttctacgaagcccagtacaaggagg tcaaggtggtggccaatgcttacaagacctttgccaaccgagtgagcaatctcaagaagaaactggatcagctgaaggcc accctccctgaccccgaggagtcgcccgtcccctcgccgagcatggacgccccctcccccacgggctccgagtccccgtt cccggggatgggggaagaagacaccaccccctcgcccaaggcggcagtggcggcggcagcggcggcggtgaagtctccct ccccggagcttgccacagacaatcgggacgtggaggacatggagctctccgatgtggaagacgaggcccccaaaattatc gtggaagagagaaaagagaagccagcggcctcaagtccgaaccccgccaagatggctgagagcgtccccagggcttcccc gctgacggcggccgccccagcagctgctgctgccgccacctctggagcgcccccggcagctgcacccgtgctggcgcccc ctgccgtcactcctccggcccccaagccggcgagccaagcccctcttccttcgtcgccggctctggggttgccaaaccta gccaacgtggacctggccaagatcagctccatcctcagcagtctgacatccgtcatgaagaacacaggggtcagtcctgc ctccagaccttcccccagcaccccgactagccccaccggcctcatgggtggcttgaaggctccggccacgggacccctgg cggcctcgcccagccccctggccagcatcctctccaaagtggagatcaccccagagagcatcctgtccgcactctccaag agccaggcccaggccgccccgggcctgcaaggtttgtcctcgttccttcagagcgttgctggaaattcgggccagcccag cgagacggcgccccagagcagctccccggcccccacaaacaccccggcggcctccgggaaggggagggctgtgttgtcca ccacgcagcccttcatgccacacagcctcagctattctccgaactcctcctcttcggccgaggtttcttccacctcagtc cacaagatgccctctggacacggccccgggctcagcttcaagccccccatcaactccctgggctttgccagcgcccaggc ccccagcccctccctccggccggtggagaccccgacccctcagtcgtcggaggtctcggagaccaaggtggagccggagc caacttcgcccagcctggagatgaagatccacaacttcctgaaggggaatccggggttcagcggcctgaacctgaacatc cccatcctgagcggcttgggctcctccggcctgccgcccgagagccacccctcctcctccccggatttcggccgggggcc caccagcacttcgatggacagcatagacggcactccggtgcgtgacgagcggagcgggacacccacgcaggacgagatga tggacaagccgtcctccagcaacgtggacaccatgtcgctgctgtcgaagatcatcagccccggctcctccacgcccagc agcacccggtcgcccctccagagccgggacgacggctactcgcaggagctgcccaactccggctaccggcctttcgggct gagccgggactccccggccgggatgtacaagccgccctcggaggggctggagctgccctcctcgctgatggactcccccc aggagaagttctaccccgacacctccttccaggaggacgaagactaccgcgacttcgactaccccggccctccgccctcc gccctgatgaacctggagaaacagccggccaagtccatcctcaagtcgggaaagctgtgcgacccctcggaatacccagc ggggatgtccggctaccggcagaggccctcggggttcggcctgaaggcccctttcggccagcccgggcggcctctccacg accagagcgacggctgcgaccccctgccctcctcgggaatctacggcagctacggcctgcggggaaacgactccggctcg gacgcctcccccacgcccagcaagaacgacgccttcttcccgccggattccaaccacagcagcctgcctccgtccgggca gcagccgcactcggggctgctgcagaagccgtaccccgactccccccacgtggctccccagaggtcccttttctcgcccc agaatgccctcgtgagccccaccggccggctgcccccctcgaacgcggagaagtctgtcctctcggccatttcggccacc tccaccatggagttcaagaatatgcttaaaaacgcctcccggaagccctccgaggagggcaagcacttcggccaggggcc caaagggggcgccagtgacctccccggcctttctccgggagggggggacccgcagaagcagccggaggagcacttccgga tcgaaaccagggtctcctcctcctgcttagacctgcccgacagcaccgaggagaagggggcgcccatcgagacgttgggc taccacaacacggccgttcgggggatgtccggggagcccatccagacggtggaatccatccgcctgctggggaagggcgg ccgagggcacgggcgagaggcctcccgcgcaggctggttcgagatgagcggtgcaggcagctcctttgaccgcggcccct caggcgcgacggagatgccccccctggggtctggcgggggcgctgggggcgtgtcaagtttccagagccagtacaaggac cggctgggctcattccaggagagcgtgggcaacttccgagccgggggcttcgccgccccctttgaccgccacgtcccacc gccccccttggagcacggggcttccttccccagagaccagctggggccgcccccctcgggccctcagccgcttccgccca aggagctcagcaccctcttcgcgagggaccactcggtgcccccgccacggatgccagcggtggatcgcgccagccccttc tcgaaggaggcctcctccccgctgaccttgcctcgcggggtgcctcctcccccgcccccgcctctcgaacggagtggggt gccgttcccctcccagccgccccctcctctcccggtggaacacgggggggtccgtccgttctctaaccctccgcccactc ccggagacctcggcctccccttcccggctccccccatggcctccgagcacggggccctgcaccaaggaacgatgaaggag cattttagcctgccgccaggagccccccgggatccgggggcccaacctcagtgcgatcacagcggtcagcccctcggccg ggctcgagacggcctgggcatagccgcccttgcccgagacggcctgggctccggcctctccgtgggctcctcggtgtccg ctcagcggaacggcacaaaccgaggtgggctggggctgaggaaccagcggccggattttaggccccgggaattcttctta aaccgagacccctttaacagcctgaaaaggccccggccccccttcgcccggggcccccccttcttcgtccccaaacgccc cttcttccctcccaggtactgagcgaagttaacgaacaggcagcaaatgtacgtccgtgtgcagagtagcaagacaaacc aagtttctttggaaggaggacccttcctggtctggcttgttttgcctttgcttcgctgttccctttgtatttcactcgag gtgtggccgggaaagatgtgtggggagggaagctggaggggcagagaaccgccggcgtctccgaggggcagggggttggg cccagcagcagcctttgagcccatcagagacaggagctttnnnnnnnnnnnnnnnnnnncaggctttgcctccctttgga aaacgctgtaaataccattgctgtgctttttatttttgtgcctgtttaaaaagctgggtattgtgttggcttgacttact ttccagtgttttcttgtgcgggggaggggggtttagaaatggggagggagacgcgagaggctttgtgggaaacagcagtc tctgcattgtacatgaatacatttaataaaatgactagtttgaaggttttga |
|
Protein
| Protein ID | habu1_s2370_g08593.t1 |
|---|---|
| Definition | - |
>habu1_s2370_g08593.t1 MLLKIFSTPSPLGAPRAGWEQWVLLSHSSGSRKRATGFAHRLNLFYLANDVIQNCKRKNAIIFRDTFAEVLPEAAALVKD KVLKLVSETAQRLLTWKYDKDALRRDPSVSKSIERIFKIWEDRNVYPEETVTVLKEALNKTGGKKFSKEFEEASAKLEEF VNSLDKQVKDGPSLTEVLENAGIFYEAQYKEVKVVANAYKTFANRVSNLKKKLDQLKATLPDPEESPVPSPSMDAPSPTG SESPFPGMGEEDTTPSPKAAVAAAAAAVKSPSPELATDNRDVEDMELSDVEDEAPKIIVEERKEKPAASSPNPAKMAESV PRASPLTAAAPAAAAAATSGAPPAAAPVLAPPAVTPPAPKPASQAPLPSSPALGLPNLANVDLAKISSILSSLTSVMKNT GVSPASRPSPSTPTSPTGLMGGLKAPATGPLAASPSPLASILSKVEITPESILSALSKSQAQAAPGLQGLSSFLQSVAGN SGQPSETAPQSSSPAPTNTPAASGKGRAVLSTTQPFMPHSLSYSPNSSSSAEVSSTSVHKMPSGHGPGLSFKPPINSLGF ASAQAPSPSLRPVETPTPQSSEVSETKVEPEPTSPSLEMKIHNFLKGNPGFSGLNLNIPILSGLGSSGLPPESHPSSSPD FGRGPTSTSMDSIDGTPVRDERSGTPTQDEMMDKPSSSNVDTMSLLSKIISPGSSTPSSTRSPLQSRDDGYSQELPNSGY RPFGLSRDSPAGMYKPPSEGLELPSSLMDSPQEKFYPDTSFQEDEDYRDFDYPGPPPSALMNLEKQPAKSILKSGKLCDP SEYPAGMSGYRQRPSGFGLKAPFGQPGRPLHDQSDGCDPLPSSGIYGSYGLRGNDSGSDASPTPSKNDAFFPPDSNHSSL PPSGQQPHSGLLQKPYPDSPHVAPQRSLFSPQNALVSPTGRLPPSNAEKSVLSAISATSTMEFKNMLKNASRKPSEEGKH FGQGPKGGASDLPGLSPGGGDPQKQPEEHFRIETRVSSSCLDLPDSTEEKGAPIETLGYHNTAVRGMSGEPIQTVESIRL LGKGGRGHGREASRAGWFEMSGAGSSFDRGPSGATEMPPLGSGGGAGGVSSFQSQYKDRLGSFQESVGNFRAGGFAAPFD RHVPPPPLEHGASFPRDQLGPPPSGPQPLPPKELSTLFARDHSVPPPRMPAVDRASPFSKEASSPLTLPRGVPPPPPPPL ERSGVPFPSQPPPPLPVEHGGVRPFSNPPPTPGDLGLPFPAPPMASEHGALHQGTMKEHFSLPPGAPRDPGAQPQCDHSG QPLGRARDGLGIAALARDGLGSGLSVGSSVSAQRNGTNRGGLGLRNQRPDFRPREFFLNRDPFNSLKRPRPPFARGPPFF VPKRPFFPPRY |
|