Gene
| Gene Model ID | habu1_s2370_g08594 |
|---|---|
| Locus | habu1_scaffold2370 : 31126 ... 42687 : + |
| To GenomeBrowser | habu1_scaffold2370:31126..42687 |
| Genes list of scaffold | habu1_scaffold2370 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| high affinity nerve growth factor receptor | EC:2.7.10.0 GO:0000166 GO:0004713 GO:0005515 GO:0006468 GO:0007169 GO:0009653 GO:0016021 GO:0031175 GO:0031323 GO:0038023 GO:0038179 GO:0044464 GO:0048523 GO:0051094 GO:0051240 GO:1902533 GO:2000026 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2370_g08594.t1 | 1 | 1 | LRR_8 | 87 | 145 | 2.3e-11 | 43.2 | 3.4e-14 | 5.6e-11 | 42.0 |
| habu1_s2370_g08594.t1 | 1 | 1 | I-set | 194 | 282 | 7.0e-14 | 51.4 | 1.5e-11 | 2.4e-08 | 33.7 |
| habu1_s2370_g08594.t1 | 1 | 1 | Ig_2 | 201 | 275 | 4.2e-10 | 39.5 | 9.8e-09 | 1.6e-05 | 24.9 |
| habu1_s2370_g08594.t1 | 1 | 1 | Pkinase_Tyr | 415 | 577 | 0.0 | 227.6 | 0.0 | 0.0 | 227.1 |
| habu1_s2370_g08594.t1 | 1 | 1 | Pkinase | 416 | 573 | 3.0e-30 | 105.2 | 2.7e-33 | 4.5e-30 | 104.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2370_g08594.t1 | gi|602663723|ref|XP_007437487.1| | PREDICTED: high affinity nerve growth factor receptor [Python bivittatus] | 0.0 |
| habu1_s2370_g08594.t1 | gi|726996891|ref|XP_010388766.1| | PREDICTED: high affinity nerve growth factor receptor [Corvus cornix cornix] | 0.0 |
| habu1_s2370_g08594.t1 | gi|327287472|ref|XP_003228453.1| | PREDICTED: high affinity nerve growth factor receptor [Anolis carolinensis] | 0.0 |
| habu1_s2370_g08594.t1 | gi|699686832|ref|XP_009888123.1| | PREDICTED: high affinity nerve growth factor receptor-like, partial [Charadrius vociferus] | 0.0 |
| habu1_s2370_g08594.t1 | gi|527243293|ref|XP_005140001.1| | PREDICTED: high affinity nerve growth factor receptor-like, partial [Melopsittacus undulatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.1 |
| Nose | 0.1 |
| Brain-1 | 0.1 |
| Eye | 0.6 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.2 |
| Spleen | 0.1 |
| Lung | 0.2 |
| Liver | 119.3 |
| Kidney | 0.0 |
| Pancreas | 0.4 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.1 |
| heart | 0.0 |
| ovary | 0.1 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s2370_g08594.t1 |
|---|---|
| Definition | - |
>habu1_s2370_g08594.t1 gcgggaggggctgcttgggaaggaggagcctggaggcagccccgcccctcgaaggttgaaaaaacccctccaggaatgga gcagccgccgcgtccacacgtgctccgcagtcgggcagaggcggcgggcagaggcagatgccctgagcgtcccccgcgac ccgggactctccgagggaggcgccgatgagagcggctgctgctccgggtccgacatgcagcccggggggagaagccggct ccgcgcctcggccggactgctgctgtgcctgggctggctgtgcctgtcgcccggcgccgcctcgccctgcctggaggagt gccgctgctacctgagcgccctgctctgccaggagccccgcgccatccactccctggcgcagctgcgcagcctggagaac ttcaccgaaatagttgtcgaaaaccagcccgagctgatcaacctgacaggggaagatctgaaaaaccccagggagctgaa gaatctgaccatcgcgaggacccacctgaagttcattgctccagatgccttcaaggccagcccaaacctgacccacgtga atctggccttcaaccagctggaattcctttcctggagggtcttctaccatctccgccttcaggagttgatccttgtgggg aaccccctccggtgtgtttgtggactgctatggctacaatcctggcagcagaagaggcagcttgactgggcgggcaacca gtccctccagtgcctgcaggaggacaggaccctggtccccgtcttcaacctcaccctctctggctgtgatttccccaagg tccggatccgctatgatcccaccccgatggcagaaggccagagcgtcaacctgacgtgtcacatcacaggagagccgaag ccggtggcaggctgggatgtgccccaggtgggggccggacgccccctcagaaccaagaactcggagtcggaaattgtgct gcagatcacgaacgtctcgtccagcttcaacctgcaaaacatcacctgccgagcagagaacgaagcgggcatgggggaag ccgtggcccggctgaacgtgaccttcccagccgtgattcgcgcggtgggccaggccgtcatgtactaccgctggtgcatc cccttctccgtggacggcaaccccacgcccagcatccggtggcagttcgaccagcaggatctcctggagacgccgatcat ttacacccagctcttcccggaagacgtccccaccaccaccatcgtccacggctgcctgatcctcgacaagccctcgcact tcttcaatggcaactacaccctgcgggtggccaacgccctgggctcggcctcctgcaccacctaccagcacttcatggac ctcccggatccgaacttccaggaagaggagcccttccacgttcaggtgtcacacgggccggatgccaagatgctggacaa cgggatcggccagtcctttggccagctgaccctgagcgaaatgctgcagatcgccacgcagatcgcctctggcatggtct atctggcctcccagcacttcgtccaccgggacctggccacccgcaactgcctggtggggcacggcctggtggtgaaaatc ggggacttcggcatgtcgcgagacatttacagcaccgactactatcgggtggggggccgtaccatgctccccatccgctg gatgcccccggagagcatcctctaccgcaagttcaccaccgagagtgacatctggagctttggggtggtcctgtgggaga tcttcacctacgggaagcagccctggtaccagctctccaacacggaggccattgagtgcatcacccagggccggcagctg gagaggcctcggacctgcccctcggaggtctacgacatcatgcagagctgctggcagagggagccccagcaacggcagag cattaaacacatccacagctgcttgcagacgctggtcaaggcccctccggtgtacctggctattctcagctaagggggag ggggagagggggcagttgccccagcttcttcatccatccatccatccacccatccaaccaagcaagaaactcaacccatg caagacctctttcgtgaactgcctgccagggaaaacactggttccctctcggaacggcaaagcactttctcgccctgctt tgggcatttccccaccttgtgtatataaaggcttgtttaggggaagagacc |
|
Protein
| Protein ID | habu1_s2370_g08594.t1 |
|---|---|
| Definition | - |
>habu1_s2370_g08594.t1 MQPGGRSRLRASAGLLLCLGWLCLSPGAASPCLEECRCYLSALLCQEPRAIHSLAQLRSLENFTEIVVENQPELINLTGE DLKNPRELKNLTIARTHLKFIAPDAFKASPNLTHVNLAFNQLEFLSWRVFYHLRLQELILVGNPLRCVCGLLWLQSWQQK RQLDWAGNQSLQCLQEDRTLVPVFNLTLSGCDFPKVRIRYDPTPMAEGQSVNLTCHITGEPKPVAGWDVPQVGAGRPLRT KNSESEIVLQITNVSSSFNLQNITCRAENEAGMGEAVARLNVTFPAVIRAVGQAVMYYRWCIPFSVDGNPTPSIRWQFDQ QDLLETPIIYTQLFPEDVPTTTIVHGCLILDKPSHFFNGNYTLRVANALGSASCTTYQHFMDLPDPNFQEEEPFHVQVSH GPDAKMLDNGIGQSFGQLTLSEMLQIATQIASGMVYLASQHFVHRDLATRNCLVGHGLVVKIGDFGMSRDIYSTDYYRVG GRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRQLERPRTCPSEVYDIMQSCW QREPQQRQSIKHIHSCLQTLVKAPPVYLAILS |
|