Gene
| Gene Model ID | habu1_s2370_g08595 |
|---|---|
| Locus | habu1_scaffold2370 : 52126 ... 63810 : + |
| To GenomeBrowser | habu1_scaffold2370:52126..63810 |
| Genes list of scaffold | habu1_scaffold2370 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2370_g08595.t1 | 1 | 1 | Laminin_EGF | 182 | 226 | 4.0e-11 | 42.6 | 7.9e-06 | 0.012 | 15.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2370_g08595.t1 | gi|602663721|ref|XP_007437486.1| | PREDICTED: platelet endothelial aggregation receptor 1 [Python bivittatus] | 0.0 |
| habu1_s2370_g08595.t1 | gi|591380309|ref|XP_007064698.1| | PREDICTED: LOW QUALITY PROTEIN: platelet endothelial aggregation receptor 1 [Chelonia mydas] | 0.0 |
| habu1_s2370_g08595.t1 | gi|641791502|ref|XP_008177271.1| | PREDICTED: platelet endothelial aggregation receptor 1 [Chrysemys picta bellii] | 0.0 |
| habu1_s2370_g08595.t1 | gi|513223041|ref|XP_004948248.1| | PREDICTED: platelet endothelial aggregation receptor 1 isoform X8 [Gallus gallus] | 0.0 |
| habu1_s2370_g08595.t1 | gi|564238128|ref|XP_006275938.1| | PREDICTED: platelet endothelial aggregation receptor 1 [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.4 |
| Venom grand-1 | 2.0 |
| Pit, infrared sensing | 2.9 |
| Nose | 0.9 |
| Brain-1 | 0.5 |
| Eye | 1.1 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.8 |
| Brain-2 | 0.4 |
| Spleen | 5.4 |
| Lung | 13.3 |
| Liver | 3.6 |
| Kidney | 2.4 |
| Pancreas | 13.0 |
| Small intestine | 1.3 |
| Large intestine | 6.7 |
| Stomach | 1.9 |
| heart | 4.3 |
| ovary | 0.5 |
| cheek muscle | 1.5 |
Transcript
| Transcript ID | habu1_s2370_g08595.t1 |
|---|---|
| Definition | - |
>habu1_s2370_g08595.t1 ttgccaaggagagatcagctccatttcccacactctccatctgcagagcatcagggaggcttcctgtttgcagccaggca gatcagcagagatgatggcttaccgttactccctcctggtgctgtggctgcagctggatcgggccctcttgctcagctcc aacgatcccaatgtctgcagctactgggaaagctgcgagaccccttgctccaacagcacccatgggttccagtgtccagc ctactgcccctgccagaacgggggcgtctgccatccccccttctccagcaaatgtgcctgccctcctggatggacgggtg acatctgctccacccggtgccccattgggcgctttggctccagctgccaggaagaatgccgctgccacaacggaggccag tgcgatcctgattcgggccagtgccagtgtgccctgggctacctgggagaggaatgccgcgaaaagtgtcccatcggcaa atatgggcaggactgccacgagacctgtgactgcaccaacgggggccactgctttcacatcagcgggggctgcttgtgcg aagccggattctacggcagtcgctgtgaggagcgcaaatgtcttcctgggctgtacggcctcagttgtcagtttccttgt ctctgcgatcctcagcacacacagagctgccaccccatctctggagaatgctcctgcaaggcaggatgggccggcctcta ctgcaacgagacgtgtcctcgtggatcccacggcctcaggtgccaggatccctgcctgtgcctgaacgggggcacttgtg atggcgagacggggcactgcagctgcccacctggctatacagacaagcactgctccagcccctgcccggatgacactttt ggggtgaactgctctcaggagtgcagctgccaaaacgccttgggctgttctccagtggacgggacctgtttctgcaagga aggacctcgttgcagccagccatgtgcggagggcctgtggggggagcagtgccgccagctgtgctcctgcaagaatgggg ccagctgttcccccaaggatggcctctgcgaatgcaccccaggcttccgggggcccaactgccagcggtccgccaaccac tccttgggggctgtgattggcatcatcatcctggccgctttgctggcggcggttctggttcttttcttctgctaccggcg gtgtcagaaggagaaggagaagcggcacgtctccgtggcctacaccacagggaggacggacagttcggaatacgtcgtcc ctgatgtgtcgcccaattacacccattattattcaaaccccagctaccacaccctctcgccctgctcccccagcttcgcc atcccaagcagctccgatctgccgggcaagaatctggaacgggactgggcaggactgcaggcggccgactgcaacgccac cctgcccagcgactggaggcaccgcgggggaagcccggcccacgggggaggctacttagaccgcagctgcagctacacgg acggcctgggaaaatatcgctgccaagtgcacgccaaggaggcgtcctggggccgcagcgacagctccctcagcagcgag aacccctatgccaccatcaaggactgtcccggccctgccgggaaggcgcccgagggcagctacatggagatgaagtcccc cccttcctccaagcgggagaaatcctacgcggagatcagcctcttcgaagacccctcctgcagctccgagacccaggaag aggaaggtgcagccgtcctgcaggcgactgcagccgtgccccccagccactacgattctcccaagaacagccacatcccc agccactatgatgtgccccccatccggcactacccgccatcccctccactccgaagacaagcccggtgaggcttctgcct gctcgtcgctgcctctcccagacacgcctcatgggaaggactaagagccaaggatgaccggccattggaggctcctggcc gttttggccaagatgaacaatggaatggggggggggaaagagcctccatggagggagacagcggacgagacctgggcagg tatcaggtgtttggggggcttcaaagaggggcctccgtcctccccctctcctcaccgcccagaggaagcatttgtccctc caggaaaagctaccagcggcagagtggggaatcagggtggggtatcgcaggaagacctcccccctcccagtgagagacct gcagcttccgtctggaaaaggagacgggccggatctggtttgggaactttcctccaagacccttccagccatttgcattc agtaaaaggggacccagagatgtgacgactgggctgccccccagcacccctcagcctgggggcagagtgaagccaggagg ggtccctgccacttggctggccacagagagcatctggaggagggaagtcgccaaggagactcctgctctttggggtccct tgaacagctgaataaaaaactttggggtgtcggtattc |
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Protein
| Protein ID | habu1_s2370_g08595.t1 |
|---|---|
| Definition | - |
>habu1_s2370_g08595.t1 MAYRYSLLVLWLQLDRALLLSSNDPNVCSYWESCETPCSNSTHGFQCPAYCPCQNGGVCHPPFSSKCACPPGWTGDICST RCPIGRFGSSCQEECRCHNGGQCDPDSGQCQCALGYLGEECREKCPIGKYGQDCHETCDCTNGGHCFHISGGCLCEAGFY GSRCEERKCLPGLYGLSCQFPCLCDPQHTQSCHPISGECSCKAGWAGLYCNETCPRGSHGLRCQDPCLCLNGGTCDGETG HCSCPPGYTDKHCSSPCPDDTFGVNCSQECSCQNALGCSPVDGTCFCKEGPRCSQPCAEGLWGEQCRQLCSCKNGASCSP KDGLCECTPGFRGPNCQRSANHSLGAVIGIIILAALLAAVLVLFFCYRRCQKEKEKRHVSVAYTTGRTDSSEYVVPDVSP NYTHYYSNPSYHTLSPCSPSFAIPSSSDLPGKNLERDWAGLQAADCNATLPSDWRHRGGSPAHGGGYLDRSCSYTDGLGK YRCQVHAKEASWGRSDSSLSSENPYATIKDCPGPAGKAPEGSYMEMKSPPSSKREKSYAEISLFEDPSCSSETQEEEGAA VLQATAAVPPSHYDSPKNSHIPSHYDVPPIRHYPPSPPLRRQAR |
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