Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2370_g08598
Locus habu1_scaffold2370 : 92356 ... 107031 : +
To GenomeBrowser habu1_scaffold2370:92356..107031
Genes list of scaffold habu1_scaffold2370

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s2370_g08598.t1 1 1 PWWP 7 58 2.0e-06 27.8 8.2e-10 6.1e-06 26.3
habu1_s2370_g08598.t1 1 1 Filament 454 757 3.6e-34 118.6 4.9e-38 3.6e-34 118.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s2370_g08598.t1 gi|602665734|ref|XP_007438449.1| PREDICTED: tanabin-like [Python bivittatus] 0.0
habu1_s2370_g08598.t1 gi|530648937|ref|XP_005311003.1| PREDICTED: nestin [Chrysemys picta bellii] 0.0
habu1_s2370_g08598.t1 gi|591380223|ref|XP_007064655.1| PREDICTED: tanabin-like [Chelonia mydas] 0.0
habu1_s2370_g08598.t1 gi|694831137|ref|XP_009462763.1| PREDICTED: nestin [Nipponia nippon] 0.0
habu1_s2370_g08598.t1 gi|729733142|ref|XP_010562492.1| PREDICTED: nestin [Haliaeetus leucocephalus] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 11.5
Venom grand-1 4.5
Pit, infrared sensing 6.0
Nose 2.3
Brain-1 1.5
Eye 2.7
fetal fibroblast 163.1
venom gland-2 4.4
Brain-2 1.7
Spleen 5.8
Lung 6.5
Liver 16.9
Kidney 6.4
Pancreas 11.7
Small intestine 6.2
Large intestine 4.4
Stomach 6.4
heart 6.0
ovary 2.8
cheek muscle 15.7

Transcript
Transcript IDhabu1_s2370_g08598.t1
Definition-
>habu1_s2370_g08598.t1
agcccctgcttttgctgctggaggggccctttctggacctggctgactggttgggcaaggaaacccaagccctggagggg
gtgggctggcttgggggctgggctggcctggtgactaagcagaagccaccaagccctgggtcaggagcaaccaggatcgg
cagccgggcctccaaattttgcagggctgggccagattgatgagatgccggaatccgctgtgaaatccacttccaacaaa
taccaggtctttttctttgggactcatgagacggcctttttgggtgccaaggatctctttccctacgaagagtgcaaggc
gaagtttggcaaaaccagcaaacggaaaggcttcagcgaaggcctgtgggagatcgaaaacgaccccaccatcaaggcct
cggggtaccagccggctcagaagaagcgccccctggaggaggggaaggcgaaggaggagcccgaggctggcaggaggggc
agccacgaggaggaagaggaggaggaggaagaggaagaggagggggacctggtgatcgacgagcaggtcagggagaagaa
ccagaaggctgcccacaagaggcgggcccgagaggccccggaggacccctcccccaagcgcatgaaagacggggaggacc
aggcggaggcggctggggagaagctgagccgtgaggacgccgggaatcggaagccggctctactggaaccagggggcgag
gggaagaacggtggtgggggtggcagcccccctaccgacgtgcccggagcagaagagaagaaggaaaaggctgcccaaga
ggaagacgaggaggaggaggaagaagaggaagaagaggaggaaagcagagatcatgagaagagcagcctccccgggaaga
gagaagagacagaagatgcgaggccgccgcctccttcgccgtcccctccgccttcgcctccgccggcctccagctcgggc
tccctcgacttcgcagccccgccgccttcggccagccagccccgggagcgggcgccgggccccgcgctcagcctggaggc
gctgcaagagcggctggaggcgctgaaggcgctgcagggccagtatctccgggggcagctgaggatccgacgcagctgcc
gggacttcccgcgcgccctgcgcgccctcagcctgcagatctgccgcagccgccggagactcatccgcgccgaggtccgc
ctgcagcgccgggaaacagaaggctctttcccgaggcgcccctcgccgcctccgtccgagctgctggccctggcctcctg
gcgccaggggctctcctcctccgccgccaccctctccggttgctccctgctgctgctccccgagcccccgccgccgcccg
ccccgccgccgccgctgccgccgcacctgcccgacctgcacgaggcgctggagaccttcctggagcgccaggagcgccac
ctccacgaccggcaaagagactaccggagctgccaggagtgcgtccgctccatcaaggcgctgcgcggccaactgcgccg
ggtgcggagccggctgtggcgggtggaggcggaactgggcatccagatgtgggacctcaacaagcgtctggaggcctacc
tggccagggtgaagttcctggaagaggagaacgagctgctgaaagccgagatcgaaggcctgaaggggggcttggtggag
accccctggagggccaagtacgaggcggaggtggccgcgctccgggtcgccctggaccgtgcctatcaggagaagtgcgt
ggcggagctggccagggactctctccacgaggaggcccagcgggtgaggagctgctgccagagggagagggcagcgcagg
aggaggccaagatgctcctgtccatcggcaagaaggagatggaggaggagaagcgggcccacatttggctgagggagaag
gccacccagctggagaaagaggtggaagacctggtggaggcccaccaagaggagctgctgaggctggaccaggagatgac
cagcttctcccagagcctggacggcttccgggcggtgcccgtctgcttccagccagtggaagtggaagactacgccaaga
ggctctccaacatctggaaaggagcggtggagacctacaagacggaggtctcacagctggaggcttccctctgcgaagcc
aaggagaacctctggaaggccaccgaacgcaaccggcagaaccagctgcagctgcaacagctggagaaggagctggccag
ccacaaggcccggaaggcggctttggaagagagcctctcccagcagtgggctcagcagcagggcgacgctgagaagctgc
agatggccatggaggcgctggaggaggagaagcagtcgctgcgcggccagatcgcccaggtgctggaggaccggcagcag
ctcatgcacctgaagatgtcgctcagcctcgaagtggccacctacaggaccctcttggaagccgagagcgccaggctgca
gctgccagccactgatctacagctggccagggggctccgagatgcgacaataaccgagtcaactcacggcaggctgccag
ggccgtcgatggacgggggccgctcggggagctgggatgtccgccccagccctgccgccttcccaaagcttcgggggttc
cacagcaaagtcgagtcggcctcctggggggtgaagagcccaagctccgcggccagggagttccaaaaggccaacgcctc
cctccggcactctcaggccagccgaagcgccgacgggctgctgctgctgcctccgccgccaaaggaggcctctgcctttc
agctggacgcctcccagcacagccagagggtgacggtcacccagctggagagcctggcccagtccatcttctgcacacag
ccccctctggctttccactccctggagctggaagaggcctcgggaaggtcccctgagagcctgggtcaaggagaggagag
caaaaagggagcggagagggaggccgaaggtagaggaggggaggaaggaaaaacctctggagaaaaggagctggaggaag
aagaagaggaggaggaggaagaagagacacggctccggcacgagccaccagccgagagggaagtcctgaatgggcctttt
ctgagccagatggtgaccgaagccgtagaaactgcgatccaggaagtgagccccaaagaaacccaccttgaatccagctt
gctcaaggcggtcaaaagccaagcagatgtttcttctgacagtgcttcatccctggaagaggagatgaaggacactcttc
ccctgagtcctaccgaggggctggaggaggcccgggaagatcacacaggggagagccagcccgccgatcccctggaggac
ctccagatctgtgaagactttgcagaggtcaatggtggccaggaagcctgggctgagctgcaagggccggaggaggcttg
ggaggccctggaggcagaggccccctgggccctgggagcaggaccgctgaggctagagagggcggaagaaggtggggcag
ttctggtccttggagaacaggagggggacgaagaaagggggtctccgggatggaaggagggcgaggtggatgaggagctg
ccggccttactggggatgacgctggggaatccgttgggagaagcacccaggaactcagaggcccttgcaaaggtgagcgg
caaccaggaaggctgggaccttgacagccccccctctgacgtccccgagggagccccagaagtgaagccagaggaggtcc
atggagggacagaagaagtggagatggtcagcccagaagatcttctctctgagggaagggaagagcctcagagtcccccc
agggaaggtgaaacttgcgatctgcaggccgggctgtttgagagggagcacctggaggtggaaggcaacccagccgagga
agacccgtcacccgctatccttacagcatcgtctgcaggtgaacaccaaacagctctcttcccggagggggagcaggaga
gcgtgaagagccacaaagagcttcttcacgaggccgattctgctccgccagaggaagagaaggagccgaagggtctggac
tccgagctcttctgcaccgaaggtgcccagcccagaagctcaagttctgccctagatgaagatggcatctcggcagatga
gccagagagggtcgagagcagggaagccgcagaagaggaggaggaggaggaggaggaggagggagatgttgtcagatctc
ttcccacagaagatacgggagatgaaggaacaatggagacagaagggcccctggatggggaggcacccaaaagtacttgg
gaactgggggtggccttcccaggggaggacgcggcaagcctccaggtgcgggagatgctgcaagagaagcaaagaacaga
ggtgcctgaagagcagcccccggaggaacaggaggaaggaggaagaggaggaggaggagggttctcaggggccccatggc
aagctgaagggagcaacgtggaggaaagaggctcagggacaatctctggagtgtcggaaacagaagacatcatggatgcc
ctggagatggaagaagtccgtggggctgttgtggcaggaaagttgctgccgaaggaggaaaatggccccaagggctctga
agacagagaattggggctggaccctccccaggcaggagagccaccagcctccagggaagagaccacctgcgcagaagaag
tccaaggctcccccccagaggccgaggcgcctgcagaggactccgttgcccggggggagggttcagggtccgaggagact
cccaaacatttagaaaccgtcccagattcccagagggagagaggtggggctggagaggagaacatcctgctaggggagat
gttgccagcccccccggctttggacaatgggctgaccgtgcccgagactccaccccttccttccttggagagggaagaga
tgcctcctgtggccccaaagtctgaggcccccatttcaggagaagacgccgcaagcgtcgaggaggacagagtggaggaa
ggggctccgaagggagaaagcggccacagtccacagactctctctgaggaagtcgggccctgctcagaagagctgctggc
cgcagagggtccggcagaagcccgggtccaaagatcaccgctcacaggagagggggaggatcagggtcctggagagtcca
gggtccccagagaggatgagcaggaagaactggaaggggcccctggccgagatcccgaggaagacccctggcaggagacc
gaggtggccagagggccaggggtccccaaggaagaggtggggccaggagagcccggtgggttcccagcagatgggttggg
cgcccgctatagccagcacgaggaagaggaggaggaggaggaggaagatcaggggcccttggaatttagcgacccagagg
ctacagttgtggcccctgcaaaggtttcgcccctgaccagcgtggctcatttgggagaaatagtgctggaaggtgagagc
tctctgcctggcccaaggcgggctgtggagtctgacctgctggaatccggtgaggacgaaggtttccccgtcttggatcc
agaagatctgatccagcagaaaacggtgaccgtggaagatcccccaggaagcagcttccctgagacattcccagaggacg
tggtgggcctttctctagacagccagggagaccccaatattctggaaattgtggaacaagctctggagtttaaccaagag
ttgatgaaggcagcggaggaggagctgggaggcctgggctccccagaagagaggtccccctatgccccccctgcaggtca
ggaccaggggccgccccggctttccccagaggctccggaagggtcatcacccgtcccgagggaagcccacccgttgctgg
agagccaggctaacgggctccaggaggaagcaagcctggaagacctgccaagcgaacttctcaacggcctcaacgggcag
gaggagacagaccctcctggagatgatggcttcatcaagagggtgactatcaccccacagttctgcacggagggcccctt
ccccatggcagagaccctaaaccagagtcctcccccaatcccaggcggtgaagaagggcttagaagcggaggcatcagcc
ctgaaggtctcggaaaggtctccctgcatctggaaggccaggaggccctggaggagaacctcctggaggacccacggcag
aagagccgtgggaaaggaggcaaagaaaccaagctggagcccaggcccttcctgttcggggatgagattcggcaccaacc
cttggaattccggccggaaggggacctggacctccagccctcagaagaccactgaaaggtccccttccggccactcatcc
cagccagtgacaaccagtttgattcctgctaaaggcaccccctctgttccagttccacaaactttcctttttttcttcct
tccttccttccttccttccttccttccttccttccttccttccttccttccttccaaagcctgagagagacccacactga
caatcaaaagcttggttaggcaacatttgcagccctttaacattttcctgataggctttttaaaaaaaaaacaaaacaaa
aaaaaaccctcttttttaaaagaaagaaaggcactctcaactttctcatagcttttgtcttcaccttaactgtaaccagc
aatttggcaaaattgtttttttgtttttttttaaagaaaatgttatgtttcatctgcctctagttgtgcccagcaggaaa
aataagttgattagtaagatccagtctcagaccctgtttttctaagtgaggcaccctgaagctgtccaggcaaactttta
cgacatcccctcctccccgccattgtctgggtcagaagggcttcacctatagtgcagagtttcccagcctctccattccc
agaattccccagcatgctggctgcagaactcccagaattctccagtagagcatgctggctgggaagttcttctgggagtt
ggagtccacctatcttacagttcctgaggctgagacacattgatctagagcaggggtagtcaaccttggctcttttatga
ctcgtggacttcaacttccagaattcctgagccagcatagctggctcaggaattctgggagttgaagtccacgagtcata
aaagagccaagattgactacccctgctagagggagatttttttcaaatagtgactcctgtaactttctagtgtgccttac
ttaaggaataggtggaacaaagctctggattttcagtataaatgtgatttgacgctgctccctt

Protein
Protein IDhabu1_s2370_g08598.t1
Definition-
>habu1_s2370_g08598.t1
MPESAVKSTSNKYQVFFFGTHETAFLGAKDLFPYEECKAKFGKTSKRKGFSEGLWEIENDPTIKASGYQPAQKKRPLEEG
KAKEEPEAGRRGSHEEEEEEEEEEEEGDLVIDEQVREKNQKAAHKRRAREAPEDPSPKRMKDGEDQAEAAGEKLSREDAG
NRKPALLEPGGEGKNGGGGGSPPTDVPGAEEKKEKAAQEEDEEEEEEEEEEEESRDHEKSSLPGKREETEDARPPPPSPS
PPPSPPPASSSGSLDFAAPPPSASQPRERAPGPALSLEALQERLEALKALQGQYLRGQLRIRRSCRDFPRALRALSLQIC
RSRRRLIRAEVRLQRRETEGSFPRRPSPPPSELLALASWRQGLSSSAATLSGCSLLLLPEPPPPPAPPPPLPPHLPDLHE
ALETFLERQERHLHDRQRDYRSCQECVRSIKALRGQLRRVRSRLWRVEAELGIQMWDLNKRLEAYLARVKFLEEENELLK
AEIEGLKGGLVETPWRAKYEAEVAALRVALDRAYQEKCVAELARDSLHEEAQRVRSCCQRERAAQEEAKMLLSIGKKEME
EEKRAHIWLREKATQLEKEVEDLVEAHQEELLRLDQEMTSFSQSLDGFRAVPVCFQPVEVEDYAKRLSNIWKGAVETYKT
EVSQLEASLCEAKENLWKATERNRQNQLQLQQLEKELASHKARKAALEESLSQQWAQQQGDAEKLQMAMEALEEEKQSLR
GQIAQVLEDRQQLMHLKMSLSLEVATYRTLLEAESARLQLPATDLQLARGLRDATITESTHGRLPGPSMDGGRSGSWDVR
PSPAAFPKLRGFHSKVESASWGVKSPSSAAREFQKANASLRHSQASRSADGLLLLPPPPKEASAFQLDASQHSQRVTVTQ
LESLAQSIFCTQPPLAFHSLELEEASGRSPESLGQGEESKKGAEREAEGRGGEEGKTSGEKELEEEEEEEEEEETRLRHE
PPAEREVLNGPFLSQMVTEAVETAIQEVSPKETHLESSLLKAVKSQADVSSDSASSLEEEMKDTLPLSPTEGLEEAREDH
TGESQPADPLEDLQICEDFAEVNGGQEAWAELQGPEEAWEALEAEAPWALGAGPLRLERAEEGGAVLVLGEQEGDEERGS
PGWKEGEVDEELPALLGMTLGNPLGEAPRNSEALAKVSGNQEGWDLDSPPSDVPEGAPEVKPEEVHGGTEEVEMVSPEDL
LSEGREEPQSPPREGETCDLQAGLFEREHLEVEGNPAEEDPSPAILTASSAGEHQTALFPEGEQESVKSHKELLHEADSA
PPEEEKEPKGLDSELFCTEGAQPRSSSSALDEDGISADEPERVESREAAEEEEEEEEEEGDVVRSLPTEDTGDEGTMETE
GPLDGEAPKSTWELGVAFPGEDAASLQVREMLQEKQRTEVPEEQPPEEQEEGGRGGGGGFSGAPWQAEGSNVEERGSGTI
SGVSETEDIMDALEMEEVRGAVVAGKLLPKEENGPKGSEDRELGLDPPQAGEPPASREETTCAEEVQGSPPEAEAPAEDS
VARGEGSGSEETPKHLETVPDSQRERGGAGEENILLGEMLPAPPALDNGLTVPETPPLPSLEREEMPPVAPKSEAPISGE
DAASVEEDRVEEGAPKGESGHSPQTLSEEVGPCSEELLAAEGPAEARVQRSPLTGEGEDQGPGESRVPREDEQEELEGAP
GRDPEEDPWQETEVARGPGVPKEEVGPGEPGGFPADGLGARYSQHEEEEEEEEEDQGPLEFSDPEATVVAPAKVSPLTSV
AHLGEIVLEGESSLPGPRRAVESDLLESGEDEGFPVLDPEDLIQQKTVTVEDPPGSSFPETFPEDVVGLSLDSQGDPNIL
EIVEQALEFNQELMKAAEEELGGLGSPEERSPYAPPAGQDQGPPRLSPEAPEGSSPVPREAHPLLESQANGLQEEASLED
LPSELLNGLNGQEETDPPGDDGFIKRVTITPQFCTEGPFPMAETLNQSPPPIPGGEEGLRSGGISPEGLGKVSLHLEGQE
ALEENLLEDPRQKSRGKGGKETKLEPRPFLFGDEIRHQPLEFRPEGDLDLQPSEDH

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