Gene
| Gene Model ID | habu1_s2370_g08606 |
|---|---|
| Locus | habu1_scaffold2370 : 246316 ... 250348 : + |
| To GenomeBrowser | habu1_scaffold2370:246316..250348 |
| Genes list of scaffold | habu1_scaffold2370 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| immunoglobulin superfamily member 8 | GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2370_g08606.t1 | 3 | 1 | V-set | 30 | 67 | 5.5e-21 | 74.5 | 7.7e-06 | 0.016 | 15.0 |
| habu1_s2370_g08606.t1 | 3 | 2 | V-set | 99 | 200 | 5.5e-21 | 74.5 | 9.9e-08 | 0.00021 | 21.1 |
| habu1_s2370_g08606.t1 | 1 | 1 | I-set | 237 | 341 | 1.9e-14 | 53.2 | 4.3e-06 | 0.009 | 15.8 |
| habu1_s2370_g08606.t1 | 3 | 3 | V-set | 384 | 475 | 5.5e-21 | 74.5 | 5.8e-07 | 0.0012 | 18.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2370_g08606.t1 | gi|602645417|ref|XP_007429148.1| | PREDICTED: immunoglobulin superfamily member 8 [Python bivittatus] | 0.0 |
| habu1_s2370_g08606.t1 | gi|637370615|ref|XP_008121992.1| | PREDICTED: immunoglobulin superfamily member 8 [Anolis carolinensis] | 0.0 |
| habu1_s2370_g08606.t1 | gi|530604155|ref|XP_005293818.1| | PREDICTED: immunoglobulin superfamily member 8 [Chrysemys picta bellii] | 0.0 |
| habu1_s2370_g08606.t1 | gi|557319287|ref|XP_006032815.1| | PREDICTED: immunoglobulin superfamily member 8, partial [Alligator sinensis] | 0.0 |
| habu1_s2370_g08606.t1 | gi|558126162|ref|XP_006115285.1| | PREDICTED: immunoglobulin superfamily member 8 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.2 |
| Venom grand-1 | 1.3 |
| Pit, infrared sensing | 0.5 |
| Nose | 0.7 |
| Brain-1 | 8.6 |
| Eye | 3.8 |
| fetal fibroblast | 10.8 |
| venom gland-2 | 0.2 |
| Brain-2 | 9.2 |
| Spleen | 0.5 |
| Lung | 0.7 |
| Liver | 1.3 |
| Kidney | 1.5 |
| Pancreas | 0.3 |
| Small intestine | 1.7 |
| Large intestine | 2.6 |
| Stomach | 0.6 |
| heart | 1.3 |
| ovary | 15.2 |
| cheek muscle | 4.1 |
Transcript
| Transcript ID | habu1_s2370_g08606.t1 |
|---|---|
| Definition | - |
>habu1_s2370_g08606.t1 ttcgagggtccttctctgcagcagttcgagtggttcctgtatcggccgccggctcccgacatctccatcggcatggtcag cacgcgagaccccaacttcccttacgccgtttttggggcccgagtgcaggcgggcaacgtctccatcctgcgcgttcggg gtgacgctgtggaactgcgtgtgagggcgatccggatggaggacacgggggtctatgagtgctacacgcccaccacggat tccaaataccagggcacctacagcgccaaggtggaggtcagagttatccctgaccagctctctgtctccgctgcccctcc ctccagtgcaaagccccctttccagggccggggggccaaagctgctccccctccccagatggtgcttttggagagccagg acctgctgctcacctgctccgtggccagcgggacccagcagcacacccatctctcggtcgccttcacagtctccgcgccc ggaagcccccggctgcagcaggaggtgatcgggctgcagcgggactttgccctggaggccgccgggcgttttgccccacg gcgctcggcccgggagctctccctggtcaagctgggcgactggcggtaccagatggcactgggccgactcaggccagagg actccgggacctatcactgcaccgccggggagtggatccaggatcccgacggcagctggcagcagatcactgagaagcgg gtaacgctggctgatgtctcggttctaagcatagcgagccagctctcggtgtctgccggcccccccagagtcctgctcag cccccgagattccctggagctcttctgcaacgtctccggaggccccgccctcctcctgccccacgtcgcctgggcggtga gctgggagctgaggaaggaggctggcgggcaggggcatctcgttgcccggctggaggccagtggagggcttgtcctgggc cagaactacgccagccgcgacgtgggcacgaggcatgtctccctgcaaaagctggcctccccactgggcactttcctgct gcggatcgcgtcggcccagccggcagacgtgggctcataccgctgcgaggttcaggccttctcgcggtctccgaacgcag agctgcgcccgttggccaccctgagctccgaggcagtcagcgtggagatcaagtcccaagcggtggtgctgggggccgtt gcatggctgcccttccccatctaccgcggcggcacagccgacgtccggtgcaacatctcggtggaatcagctcaggacct ccacctggccctcagctggtgggcagagctaccacaaccgggctccgccccgcttggggtcatcttggcctctgtggacc gcgagggggtggcccagctggaggagcggccgtctggcggggccctgagcgtggataaagtgggtccgcagagccaccgg ctgcgcctacacgcggtccagccatccgacgaagggggctactactgcgctgtgaccgcctgggtgcactctcctgaccg cagctggtatcaggccgcttcggcaaagtccaacatggtcacggtgtacccgtatccgttggccatggacaccctcctca tccctctggcggtcggcatctccagcgccatcctcttgggggtctccatcctcgtctcggtcacctgctgcttcatggcg aggctgcgcaagaggtgaacatcggccgggcggacatagtcctgccagtcaccaagatggcgtcttctcaaccaaatctc tctgccctgtgcccattgtcaatttgctgg |
|
Protein
| Protein ID | habu1_s2370_g08606.t1 |
|---|---|
| Definition | - |
>habu1_s2370_g08606.t1 MVSTRDPNFPYAVFGARVQAGNVSILRVRGDAVELRVRAIRMEDTGVYECYTPTTDSKYQGTYSAKVEVRVIPDQLSVSA APPSSAKPPFQGRGAKAAPPPQMVLLESQDLLLTCSVASGTQQHTHLSVAFTVSAPGSPRLQQEVIGLQRDFALEAAGRF APRRSARELSLVKLGDWRYQMALGRLRPEDSGTYHCTAGEWIQDPDGSWQQITEKRVTLADVSVLSIASQLSVSAGPPRV LLSPRDSLELFCNVSGGPALLLPHVAWAVSWELRKEAGGQGHLVARLEASGGLVLGQNYASRDVGTRHVSLQKLASPLGT FLLRIASAQPADVGSYRCEVQAFSRSPNAELRPLATLSSEAVSVEIKSQAVVLGAVAWLPFPIYRGGTADVRCNISVESA QDLHLALSWWAELPQPGSAPLGVILASVDREGVAQLEERPSGGALSVDKVGPQSHRLRLHAVQPSDEGGYYCAVTAWVHS PDRSWYQAASAKSNMVTVYPYPLAMDTLLIPLAVGISSAILLGVSILVSVTCCFMARLRKR |
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