Gene
| Gene Model ID | habu1_s2370_g08607 |
|---|---|
| Locus | habu1_scaffold2370 : 253159 ... 256915 : - |
| To GenomeBrowser | habu1_scaffold2370:253159..256915 |
| Genes list of scaffold | habu1_scaffold2370 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| g protein-activated inward rectifier potassium channel 3 | GO:0008076 GO:0015467 GO:0034765 GO:0071805 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2370_g08607.t1 | 1 | 1 | IRK | 49 | 370 | 0.0 | 542.8 | 0.0 | 0.0 | 542.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2370_g08607.t1 | gi|637370618|ref|XP_008121994.1| | PREDICTED: G protein-activated inward rectifier potassium channel 3 [Anolis carolinensis] | 0.0 |
| habu1_s2370_g08607.t1 | gi|602645407|ref|XP_007429143.1| | PREDICTED: G protein-activated inward rectifier potassium channel 3 [Python bivittatus] | 0.0 |
| habu1_s2370_g08607.t1 | gi|591383275|ref|XP_007066100.1| | PREDICTED: G protein-activated inward rectifier potassium channel 3 isoform X2 [Chelonia mydas] | 0.0 |
| habu1_s2370_g08607.t1 | gi|558126158|ref|XP_006115284.1| | PREDICTED: G protein-activated inward rectifier potassium channel 3 [Pelodiscus sinensis] | 0.0 |
| habu1_s2370_g08607.t1 | gi|591383273|ref|XP_007066099.1| | PREDICTED: G protein-activated inward rectifier potassium channel 3 isoform X1 [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 6.7 |
| Eye | 1.9 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 7.2 |
| Spleen | 0.1 |
| Lung | 0.1 |
| Liver | 12.0 |
| Kidney | 0.8 |
| Pancreas | 0.0 |
| Small intestine | 0.2 |
| Large intestine | 0.1 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.1 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s2370_g08607.t1 |
|---|---|
| Definition | - |
>habu1_s2370_g08607.t1 aggatttgaatataggtgtgcgctccccccttaaaacgtgggttgggcttgcaaaaacagccttgcggagtaggaacagg agaagcaaagatctggaggccgcccagcgctacgatggccaaagacaacttggctttccctgcccccatctctgagggca aagcacccctttcctcacaaccggccaagtcggcggccttgcggcgcctgggcgagggccctgagaaggccgagaagaag cgtgggcgccaacgctacgtggagaaggatggcaagtgcaacgtccagcacgggaacgtgcgagagacctaccgctatct cactgacatcttcaccacgctggtggacctgaagtggcgcttcagcctgctggtcttcatcctggcctacgcgatcacct ggctcttcttcggcctcatctggtggttcattgcctactgccggggcgacctggaccatctgggggacgacgcctggacc ccctgtgtcaacaacctcaacggcttcgtctcggcctttctcttctccatcgagaccgagaccaccatcggctacgggca ccgggtcatcaccgacaagtgccccgagggcatcatactgctcctcctccaagccatcctgggctccatggtgaatgcct tcatggtgggctgcatgttcgtcaagatctcccagcccaacaagcgggcggagacgctggtgttttcctcccacgccgtc atctcgctgcgggatgaccacctctgcctcatgttccgggtgggggacctgcgcaactcccacatcgtggaggcctcgat ccgggccaagctgatcaagtccaagcagacgcaggaaggggagttcatccccctcaaccagacggacctcagcgtgggct tcgagacgggtgacgaccgtctcttcctggtctccccactgatcatcagccacgagatcaacgagcacagtcccttctgg gaggtgtccaaggaacagctgcggaaggacgagtttgaggtcgtggtcatcctggaagggatggtggaggccacagggat gacgtgccaagcccggagctcctacctggtggacgaggtcctgtggggacatcgcttcatgtcggtcctctccttggagg atggattttacgaggtggattacaacagcttccaccagacctttgaggtgcccacccccagctgcagcgcccgggagctg gcggaggctgcagctcgcatggacgcccacctgtactggtccatccccagccggctggatgagaaggtggaggaggggac agagaagggggacgagggggacaaagagaggaacgggaacctcaccagcaccgagagcgagtccaaggtctaacaggcct ccggacgggcagagcgagccaggaggcctgggcggtggcacaaggcagccagagggggcagggaagccatctgggcaagc gaaagtgccctcccagctggtttggaccttggggttatcagcacagacggcaaaagactcaaccgagtcttg |
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Protein
| Protein ID | habu1_s2370_g08607.t1 |
|---|---|
| Definition | - |
>habu1_s2370_g08607.t1 MAKDNLAFPAPISEGKAPLSSQPAKSAALRRLGEGPEKAEKKRGRQRYVEKDGKCNVQHGNVRETYRYLTDIFTTLVDLK WRFSLLVFILAYAITWLFFGLIWWFIAYCRGDLDHLGDDAWTPCVNNLNGFVSAFLFSIETETTIGYGHRVITDKCPEGI ILLLLQAILGSMVNAFMVGCMFVKISQPNKRAETLVFSSHAVISLRDDHLCLMFRVGDLRNSHIVEASIRAKLIKSKQTQ EGEFIPLNQTDLSVGFETGDDRLFLVSPLIISHEINEHSPFWEVSKEQLRKDEFEVVVILEGMVEATGMTCQARSSYLVD EVLWGHRFMSVLSLEDGFYEVDYNSFHQTFEVPTPSCSARELAEAAARMDAHLYWSIPSRLDEKVEEGTEKGDEGDKERN GNLTSTESESKV |
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