Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2370_g08608
Locus habu1_scaffold2370 : 259706 ... 276511 : +
To GenomeBrowser habu1_scaffold2370:259706..276511
Genes list of scaffold habu1_scaffold2370

Annotation by Blast2GO
Annotation GO
atp-sensitive inward rectifier potassium channel 10 GO:0005242 GO:0008076 GO:0034765 GO:0071805

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s2370_g08608.t2 1 1 IRK 31 366 0.0 483.6 0.0 0.0 483.2

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 1.4
Venom grand-1 0.9
Pit, infrared sensing 3.0
Nose 1.8
Brain-1 3.7
Eye 1.7
fetal fibroblast 0.0
venom gland-2 0.8
Brain-2 8.6
Spleen 2.3
Lung 1.9
Liver 5.4
Kidney 11.5
Pancreas 0.6
Small intestine 1.2
Large intestine 3.2
Stomach 1.1
heart 0.9
ovary 0.3
cheek muscle 0.5

Transcript
Transcript IDhabu1_s2370_g08608.t1
Definition-
>habu1_s2370_g08608.t1
aggcgggcgctgagagaaggtcctctccaggtgagggtcccccagcttgcagtccaagccttctcccaactcaagatgac
ctcagccaccaaggtgtactacagccagaccacccaaaccgacagccaccccctgattggcccagtgctgcggaagaggc
gggtcatgaccaaggacgggcgaagtaacgtgcgcatggagcacatcgcggacaagcgcttcctgtacctgaaggacctc
tggacgactttcatcgacatgcagtggcgctacaagctgatcctcttctcggcctcctttgccggcacctggttcctctt
cggggtcgtctggtacctggtggccctgctgcacggggacctgctggagttcggccctccagccaaccacacgccgtgcg
tcatgcaggtccacacgctgaccggggccttccttttctccctggagtcccagaccaccatcggctacggcttccgctac
atcagcgaggagtgcccgctggccatcgtcctgctcatcagccagctggtcctcaccaccatcatggagatcttcatcac
cggcaccttcctggccaagatcgctcggcccaaaaagagggccgagaccatcaagttcagccagaacgccgtggtggctc
agcacgacggcaaaacctgcctgatgatccgggtggccaacatgcggaagagcctcttgatcggctgccaggtgacgggg
aaactccttcagacctacctcaccaaggaaggtgagaacgtccggctgaaccaggtcaacgtgaacttccaagtagacac
gtcttccgacagccccttcctcatcttgcccctcaccttctaccacgtggtgaacgagcgcagccccttccgagacatgg
ccctgcgcacgggggagggcgacttcgagctggtggtgatcctcagcggcaccgtggagtccaccagcgccacctgccaa
gtgcgcacctcttacctcccggaggagatcctgtggggctacgagtttaccccggtcatctctctctcggccagcgggaa
atacgtggccgacttcagcctgttcgagcaagtgatcaaggtggcccctccgtgctgcctccacgaaaccgcgcggtttg
gcgaccctgagaagctgaagctggaggaatcgttccgggagagaaccgagcgggaaagcaccccgctgagggcagcctcc
tcacctgagcccaccttgaagtcggtccatgtgggaaatgccgtcacgctgcccgtggccattcccaaggggcagaggct
caccaatctcctcctgagggccatctggagggaagaaggcatcgccatctggatggagtccaaagacatcagtgtgatag
gcatccactatgctggccgggtggccttcctggaggatgagatggccttcagaatcaccaacctgagcctgggcgacggg
gacacctacgaaatctccaccggcttcaccaccacccccccacagctgctcagcagcttcctggtggccgtattcaacat
caccgaaaggatctccttgaagaacaattcctgccacattgagctggactgtgaggcaggaatggggtctggccacaagg
tgacctacgcctggaaggacacgaaggcaggcaccaccctgagtcgggaggcccggctctctcagctggtgcaggccaac
caggaagaggcctacacctgcaccgcccagagcaccaccgcccagagcaccttcagcgtcgtcctccagcatccgtgcgc
tcccagcactgcaagcccagaggaccccaactcttccagtctgcaagccccactgagtggggtcacttggcaaagtctca
gtgcttctgcagatacttattttgggggcgtcatcgaactagatggggcggttcccagcttgaccctcggctgtgcaagg
gtggctacttgggagtaaagttgctctgtggccacaatatccagactacgtaaagcatattaccaataacgcagc
Transcript IDhabu1_s2370_g08608.t2
Definition-
>habu1_s2370_g08608.t2
aggcgggcgctgagagaaggtcctctccaggtgagggtcccccagcttgcagtccaagccttctcccaactcaagatgac
ctcagccaccaaggtgtactacagccagaccacccaaaccgacagccaccccctgattggcccagtgctgcggaagaggc
gggtcatgaccaaggacgggcgaagtaacgtgcgcatggagcacatcgcggacaagcgcttcctgtacctgaaggacctc
tggacgactttcatcgacatgcagtggcgctacaagctgatcctcttctcggcctcctttgccggcacctggttcctctt
cggggtcgtctggtacctggtggccctgctgcacggggacctgctggagttcggccctccagccaaccacacgccgtgcg
tcatgcaggtccacacgctgaccggggccttccttttctccctggagtcccagaccaccatcggctacggcttccgctac
atcagcgaggagtgcccgctggccatcgtcctgctcatcagccagctggtcctcaccaccatcatggagatcttcatcac
cggcaccttcctggccaagatcgctcggcccaaaaagagggccgagaccatcaagttcagccagaacgccgtggtggctc
agcacgacggcaaaacctgcctgatgatccgggtggccaacatgcggaagagcctcttgatcggctgccaggtgacgggg
aaactccttcagacctacctcaccaaggaaggtgagaacgtccggctgaaccaggtcaacgtgaacttccaagtagacac
gtcttccgacagccccttcctcatcttgcccctcaccttctaccacgtggtgaacgagcgcagccccttccgagacatgg
ccctgcgcacgggggagggcgacttcgagctggtggtgatcctcagcggcaccgtggagtccaccagcgccacctgccaa
gtgcgcacctcttacctcccggaggagatcctgtggggctacgagtttaccccggtcatctctctctcggccagcgggaa
atacgtggccgacttcagcctgttcgagcaagtgatcaaggtggcccctccgtgctgcctccacgaaaccgcgcggtttg
gcgaccctgagaagctgaagctggaggaatcgttccgggagagaaccgagcgggaaagcaccccgctgagggcagcctcc
tcacctgagcccaccttgaagtcggtccatgtgggaaatgccgtcacgctgcccgtggccattcccaaggggcagaggct
caccaatctcctcctgagggccatctggagggaagaaggcatcgccatctggatggagtccaaagacatcagtgtgatag
gcatccactatgctggccgggtggccttcctggaggatgagatggccttcagaatcaccaacctgagcctgggcgacggg
gacacctacgaaatctccaccggcttcaccaccacccccccacagctgctcagcagcttcctggtggccgtattcaacat
caccgaaaggatctccttgaagaacaattcctgccacattgagctggactgtgaggcaggaatggggtctggccacaagg
tgacctacgcctggaaggacacgaaggcaggcaccaccctgagtcgggaggcccggctctctcagctggtgcaggccaac
caggaagaggcctacacctgcaccgcccagagcaccaccgcccagagcaccttcagcgtcgtcctccagcatccgtgcgc
tcccagcactgcaagcccaggaccctgggcactgggcctggcatctctcctgctcagaggattcctggtgcccgccctga
ctgctgctctgctgctgtgaccggagcagaccctgggtggctggttcctgcatcatcggggccgctttggcctcccccct
ggcccccaagccaggggcctgatgaaatcttatcagggcgccaaccacatcaagcaacgctccaaaggatgaccggaagt
cttatttcattgagattagctggaataagacagttttatcctcgcttcttatatcccagggaatcggggtctctcccaag
acgggttctgatttcccagagtttaatccctcagatcagcttcagccccctttttcttatttcatgggtcaaggcatccc
caccccagcccacccacagtctnnnccgcaggctggccccaggggtctccgcagtgccagttctcaaggacggggtgggg
gggtgagcaacctgtccagcaggtggcagctgggggccactgtgctggaaaagacccttctctccccatttcccagatgg
agcttttgtgtttaaggtgcttcaggacgggccatttcctgctgttacccattaaaagacatggtgaaaccttcctgt

Protein
Protein IDhabu1_s2370_g08608.t1
Definition-
>habu1_s2370_g08608.t1
MTSATKVYYSQTTQTDSHPLIGPVLRKRRVMTKDGRSNVRMEHIADKRFLYLKDLWTTFIDMQWRYKLILFSASFAGTWF
LFGVVWYLVALLHGDLLEFGPPANHTPCVMQVHTLTGAFLFSLESQTTIGYGFRYISEECPLAIVLLISQLVLTTIMEIF
ITGTFLAKIARPKKRAETIKFSQNAVVAQHDGKTCLMIRVANMRKSLLIGCQVTGKLLQTYLTKEGENVRLNQVNVNFQV
DTSSDSPFLILPLTFYHVVNERSPFRDMALRTGEGDFELVVILSGTVESTSATCQVRTSYLPEEILWGYEFTPVISLSAS
GKYVADFSLFEQVIKVAPPCCLHETARFGDPEKLKLEESFRERTERESTPLRAASSPEPTLKSVHVGNAVTLPVAIPKGQ
RLTNLLLRAIWREEGIAIWMESKDISVIGIHYAGRVAFLEDEMAFRITNLSLGDGDTYEISTGFTTTPPQLLSSFLVAVF
NITERISLKNNSCHIELDCEAGMGSGHKVTYAWKDTKAGTTLSREARLSQLVQANQEEAYTCTAQSTTAQSTFSVVLQHP
CAPSTASPEDPNSSSLQAPLSGVTWQSLSASADTYFGGVIELDGAVPSLTLGCARVATWE
Protein IDhabu1_s2370_g08608.t2
Definition-
>habu1_s2370_g08608.t2
MTSATKVYYSQTTQTDSHPLIGPVLRKRRVMTKDGRSNVRMEHIADKRFLYLKDLWTTFIDMQWRYKLILFSASFAGTWF
LFGVVWYLVALLHGDLLEFGPPANHTPCVMQVHTLTGAFLFSLESQTTIGYGFRYISEECPLAIVLLISQLVLTTIMEIF
ITGTFLAKIARPKKRAETIKFSQNAVVAQHDGKTCLMIRVANMRKSLLIGCQVTGKLLQTYLTKEGENVRLNQVNVNFQV
DTSSDSPFLILPLTFYHVVNERSPFRDMALRTGEGDFELVVILSGTVESTSATCQVRTSYLPEEILWGYEFTPVISLSAS
GKYVADFSLFEQVIKVAPPCCLHETARFGDPEKLKLEESFRERTERESTPLRAASSPEPTLKSVHVGNAVTLPVAIPKGQ
RLTNLLLRAIWREEGIAIWMESKDISVIGIHYAGRVAFLEDEMAFRITNLSLGDGDTYEISTGFTTTPPQLLSSFLVAVF
NITERISLKNNSCHIELDCEAGMGSGHKVTYAWKDTKAGTTLSREARLSQLVQANQEEAYTCTAQSTTAQSTFSVVLQHP
CAPSTASPGPWALGLASLLLRGFLVPALTAALLL

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