Gene
| Gene Model ID | habu1_s2370_g08610 |
|---|---|
| Locus | habu1_scaffold2370 : 316412 ... 320685 : - |
| To GenomeBrowser | habu1_scaffold2370:316412..320685 |
| Genes list of scaffold | habu1_scaffold2370 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2370_g08610.t1 | 1 | 1 | RGM_N | 39 | 205 | 0.0 | 197.9 | 0.0 | 0.0 | 197.1 |
| habu1_s2370_g08610.t1 | 1 | 1 | RGM_C | 209 | 375 | 0.0 | 201.3 | 0.0 | 0.0 | 200.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2370_g08610.t1 | gi|591380245|ref|XP_007064666.1| | PREDICTED: hemojuvelin [Chelonia mydas] | 0.0 |
| habu1_s2370_g08610.t1 | gi|641767779|ref|XP_005293696.2| | PREDICTED: LOW QUALITY PROTEIN: hemojuvelin [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.2 |
| Venom grand-1 | 1.8 |
| Pit, infrared sensing | 1.0 |
| Nose | 0.1 |
| Brain-1 | 0.3 |
| Eye | 0.7 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.3 |
| Brain-2 | 0.6 |
| Spleen | 0.2 |
| Lung | 0.2 |
| Liver | 0.1 |
| Kidney | 0.1 |
| Pancreas | 0.2 |
| Small intestine | 0.3 |
| Large intestine | 0.3 |
| Stomach | 0.3 |
| heart | 0.7 |
| ovary | 0.2 |
| cheek muscle | 67.2 |
Transcript
| Transcript ID | habu1_s2370_g08610.t1 |
|---|---|
| Definition | - |
>habu1_s2370_g08610.t1 cacgctgctcagaaaaagaattcgaggttcaccactagccggagcactgaggaagacgcacagtgcccacgcaggaggct ggccgaggcgctgtccagagaagggctaggatcgatcacgcactgcctctctgatgtcctggatgaaagaggcaggtgca ggaccaggtgtggggaaggccttccttgcaatcggggtcttttccagaggccaggagtggtgagggcgagcagcttccct ccaaggctgtatggattggcgtgggggacccccttccttgccaaggctgccacacctcccgggcagagccttcctcctaa aaactctcttcatcctcctgtgctgcagatacgtgcaagcccgctgcaggatcctgcgctgcaactcggagtatgtggcc tccaccctccccctgcggggtcctggcaggagggcagcccactgcctggccttgcgcgcctatgcccgctgcacccgcca cacagcccgcgcctgccgcggggacctggctttccacctggctgtccatggcattgaggacctcatggcccagcacaact gctccaaggaggggcccagcccggcgccccgtcccccccgtccccccggggctgggtccccagacttctgtgactatgag aaggcctttgctcacaagcgcggcagaccacccgcctaccagcactgtgcttccttcggggacccccatgtccggacctt cgcggacgaattccacacctgccgtgtggagggctcctggccactgcttgacaatcactacttatttgcccaagccacca actcccccgtggccaaaggatcgaatgctacagccatgagcaagatcaccatcatcttcaagaacatgaaggagtgcatt gaccagaaagtctaccaagccgaggcggacaacctcccggcggcatttgtggatggctccgtgaacgggggggagcggcc cggtgggcacagcctcagcatcctcgcgcgggctcccgggcagcatgtggagatccgggcggcctacattggtaccatca ttgcggtacgccggacagggaagcagctctccttctccatccgtgtggccgaggaggtggccagcgccttcaccgcggag caggacctgcagctgtgtgtgggcggctgtcctcccagccagcgcatctcccggcagcatggctgctgcagccacggcac cgtcaccgccgagaaggcccaccggctgtgcaaggagacgctgccggtggaggacgtctacttccactcgtgtgtcttcg atgtggtggcctcgggggacagcaacttcaccctcgcggcacgtggcgccttggaggacgctcggcgcttccatccagat gccaagaagcttcacctcttccggcgtgacgctgcccaacaggccaccgccagctcctttctctgcctcaccctggcagt aatcctggggcttgactgggagatctgaactctgccagcattggcagcacctggagtgccttcctacggaggcgccagat atgaagattgcgagaaggaaggctcgctcattcccaggcagccgttttcaaacctttggggtgagtatggatgccatcaa atgcactggagggagggtcaccccagccaaggagacttgacgtttcctccggcaccacatccagtcttctatcagctgcc attcctgcattaaatggtgagctgggatgtcttcgctttgatttttgagttctgtagaaagtggactatgcacagaataa tgtcccttcagaagacggatgtttttgtatcgggactgtggtctgagaaagcagagtcacaacctaggattgcctgagta aacaaccttggtagagttactaatatgcctaaagaaaatacgcatgaagtaccttttccattctgttcttctcctctctc ccccccccccgcctgctgcctttggctgtccgttcttctatgaaaagagagaaaacatcttactagcggttctatgcatc cttcccagaatatttgcattggtatagttaccgaaatgcaactgaggaagaaaactataataaataaatgtttttccttc attttt |
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Protein
| Protein ID | habu1_s2370_g08610.t1 |
|---|---|
| Definition | - |
>habu1_s2370_g08610.t1 MDWRGGPPSLPRLPHLPGRAFLLKTLFILLCCRYVQARCRILRCNSEYVASTLPLRGPGRRAAHCLALRAYARCTRHTAR ACRGDLAFHLAVHGIEDLMAQHNCSKEGPSPAPRPPRPPGAGSPDFCDYEKAFAHKRGRPPAYQHCASFGDPHVRTFADE FHTCRVEGSWPLLDNHYLFAQATNSPVAKGSNATAMSKITIIFKNMKECIDQKVYQAEADNLPAAFVDGSVNGGERPGGH SLSILARAPGQHVEIRAAYIGTIIAVRRTGKQLSFSIRVAEEVASAFTAEQDLQLCVGGCPPSQRISRQHGCCSHGTVTA EKAHRLCKETLPVEDVYFHSCVFDVVASGDSNFTLAARGALEDARRFHPDAKKLHLFRRDAAQQATASSFLCLTLAVILG LDWEI |
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