Gene
| Gene Model ID | habu1_s2370_g08613 |
|---|---|
| Locus | habu1_scaffold2370 : 329056 ... 330380 : + |
| To GenomeBrowser | habu1_scaffold2370:329056..330380 |
| Genes list of scaffold | habu1_scaffold2370 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2370_g08613.t1 | 1 | 1 | BolA | 39 | 114 | 2.2e-29 | 101.2 | 1.8e-33 | 2.7e-29 | 100.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2370_g08613.t1 | gi|189441826|gb|AAI67635.1| | LOC100170577 protein [Xenopus (Silurana) tropicalis] | 0.0 |
| habu1_s2370_g08613.t1 | gi|556963526|ref|XP_005991699.1| | PREDICTED: bolA-like protein 1 [Latimeria chalumnae] | 0.0 |
| habu1_s2370_g08613.t1 | gi|301618210|ref|XP_002938520.1| | 0.0 | |
| habu1_s2370_g08613.t1 | gi|564248207|ref|XP_006263196.1| | PREDICTED: bolA-like protein 1 isoform X2 [Alligator mississippiensis] | 0.0 |
| habu1_s2370_g08613.t1 | gi|530603908|ref|XP_005293699.1| | PREDICTED: bolA-like protein 1 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 45.5 |
| Venom grand-1 | 100.1 |
| Pit, infrared sensing | 46.5 |
| Nose | 50.3 |
| Brain-1 | 21.5 |
| Eye | 45.8 |
| fetal fibroblast | 25.3 |
| venom gland-2 | 82.0 |
| Brain-2 | 30.8 |
| Spleen | 59.1 |
| Lung | 47.6 |
| Liver | 103.2 |
| Kidney | 97.3 |
| Pancreas | 142.6 |
| Small intestine | 109.1 |
| Large intestine | 80.2 |
| Stomach | 236.7 |
| heart | 85.1 |
| ovary | 39.5 |
| cheek muscle | 144.9 |
Transcript
| Transcript ID | habu1_s2370_g08613.t1 |
|---|---|
| Definition | - |
>habu1_s2370_g08613.t1 atcggcgcggtgaggtcataattgccccttcgcggagacgcaggagcgcgctcagggcaaaggaaagagcgggcggacct gcgcttccgacacagctctccccgccggctctccgatgctctcctccagcctgctggtgctcggccgtgccctcctccgc tgcccagccggacgcgcggcgctgagcgggtctgccatggagaagccggtggagtcgggcatccgggccaagctgcaggc ggccctggagcccctccacctggaggtcatcaacgacagccacctgcacgccgtgccgcgcggctcggagacccacttcc gggtggtggtggccagccagcgcttcgagggcctctcgctcatccaccggcaccgcctggtcaacgatctcctccaggaa gagctggccggccccgtccactcgctctccatccaggccaagaccccgcagcagtgggagaagaagggcgcgcccgtcgg ccagagcccccggtgcctgggaggggccaagcacgacccgtccgcggccggcaagttggcgaagacggggctcacgcaag ccgggccggaaggcccgggggggctctgacctccaggcctccttccggtttcagttgcccagagcagcccttggtgtccg ggccggtccggcttgctcccctgcctggtgtctgctgaagcgtattaaatgccttgggctttcctccctct |
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Protein
| Protein ID | habu1_s2370_g08613.t1 |
|---|---|
| Definition | - |
>habu1_s2370_g08613.t1 MLSSSLLVLGRALLRCPAGRAALSGSAMEKPVESGIRAKLQAALEPLHLEVINDSHLHAVPRGSETHFRVVVASQRFEGL SLIHRHRLVNDLLQEELAGPVHSLSIQAKTPQQWEKKGAPVGQSPRCLGGAKHDPSAAGKLAKTGLTQAGPEGPGGL |
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