Gene
| Gene Model ID | habu1_s2370_g08614 |
|---|---|
| Locus | habu1_scaffold2370 : 331710 ... 336295 : - |
| To GenomeBrowser | habu1_scaffold2370:331710..336295 |
| Genes list of scaffold | habu1_scaffold2370 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| synaptic vesicle glycoprotein 2a | GO:0004872 GO:0005783 GO:0005911 GO:0006874 GO:0007165 GO:0008021 GO:0016021 GO:0019901 GO:0022857 GO:0031594 GO:0043005 GO:0048786 GO:0055085 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2370_g08614.t2 | 1 | 1 | Pentapeptide_4 | 45 | 114 | 2.8e-11 | 43.0 | 1.3e-14 | 2.8e-11 | 43.0 |
| habu1_s2370_g08614.t2 | 1 | 1 | MFS_1 | 127 | 239 | 9.4e-12 | 44.3 | 5.2e-15 | 1.1e-11 | 44.0 |
| habu1_s2370_g08614.t2 | 1 | 1 | Sugar_tr | 141 | 270 | 4.9e-07 | 28.6 | 2.9e-10 | 6.2e-07 | 28.3 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.7 |
| Venom grand-1 | 0.3 |
| Pit, infrared sensing | 0.9 |
| Nose | 0.1 |
| Brain-1 | 23.8 |
| Eye | 5.3 |
| fetal fibroblast | 0.3 |
| venom gland-2 | 0.2 |
| Brain-2 | 27.1 |
| Spleen | 0.2 |
| Lung | 0.1 |
| Liver | 0.3 |
| Kidney | 0.1 |
| Pancreas | 0.1 |
| Small intestine | 0.2 |
| Large intestine | 0.2 |
| Stomach | 0.1 |
| heart | 9.4 |
| ovary | 0.2 |
| cheek muscle | 1.2 |
Transcript
| Transcript ID | habu1_s2370_g08614.t1 |
|---|---|
| Definition | - |
>habu1_s2370_g08614.t1 gagtaacactgttaagcctttaagtaacaaagagcaaacctcacatcgctcctgcccacgagccacgccgccagagacag tacaagccacggccacgttggagcccaccaaggtcctcgcccagtgggggatcctgggagttgttgccccaacgcccttc aagttgggaagaagggtgttctgggaaaccagcctttctctccagttgagggtcctccaaacctttctggttctttcttt cccctcctcctccaccacctaccttggccaccgggcagctactacggcctgaccgtctggttcccagacatgattaagca cctccagaatgtggaatatgcctcccgcacgaaggtctttaacaacgagacgttcagacacatcaccttcaacttcaccc tggagaaccagatccaccgccggggggaatacttcaatgacaagtttattggcctcaagatgaagtcggtctccttcatt gactctttgtttgaagagtgctactttgaggacgtcacatcgagcaatactttcttcaggaactgcacttttctggccac cgtcttctacaacacagacctctttgagtacaagttcatcgacagccggatcgtcaacagcactttcctgcacaacaaag aagggtgccagctggatttcagtgacgacaacaacgcttacatgatctactttgtcagcttcctgggcaccctggcggtg ctgccaggcaacattgtgtctgcgctcctgatggacaagatcgggcgtcttcgcatgttggccggctcgagcgtcatgtc ttgcatcagctgcttctttttgtccttcggcaaaagcgagtcagccatgattgccctcctttgcttgtttggcggggtca gcattgcctcctggaacgccctggacgtcctcacggtggagctgtacccttcggacagaaggaccaccgcgtttggcttc ctcaatgctctctgcaagctggcggcggttttgggcatcagcatcttcacgtcgtttgtgggcatcacaaaagccgtgcc cattttactggcatcagcggccctggctgtgggcagctctctggccctgaagctgccagagaccagggggcaggtgctgc aatgagagtgggcttctgaacaaaaccaagacacaaaccatatgtagctctgtctgtgcgcaagaccaactgacaaaaac tttgtgctgtggtgtagtttttagatgtttgtaaagaacaatttaaaaaaaaaaccaggaaaaaaaaacaacaacccatg tcaactgtagtctctgggtcatttcattttgtataaaccgagaagaagccaagaatgatgattagataggagttatttta aatgtcattgtgagaaacagtgattttttttttaaaaaaaagatgctttggctaatattatgtgtacagattgttcagca ggaaaaggaaatttggatgtttggctgaatcgagccatgttcccacgaccaccataatgaacttgtagtttaacaacaat ccatgtaaaaaaacggagggaaataaaaagtttgaaaaatctaatgatc |
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| Transcript ID | habu1_s2370_g08614.t2 |
| Definition | - |
>habu1_s2370_g08614.t2 ggccacgttggagcccaccaaggtcctcgcccagtgggggatcctgggagttgttgccccaacgcccttcaagttgggaa gaagggtgttctgggaaaccagcctttctctccagttgagggtcctccaaacctttctggttctttctttcccctcctcc tccaccacctaccttggccaccgggcagctactacggcctgaccgtctggttcccagacatgattaagcacctccagaat gtggaatatgcctcccgcacgaaggtctttaacaacgagacgttcagacacatcaccttcaacttcaccctggagaacca gatccaccgccggggggaatacttcaatgacaagtttattggcctcaagatgaagtcggtctccttcattgactctttgt ttgaagagtgctactttgaggacgtcacatcgagcaatactttcttcaggaactgcacttttctggccaccgtcttctac aacacagacctctttgagtacaagttcatcgacagccggatcgtcaacagcactttcctgcacaacaaagaagggtgcca gctggatttcagtgacgacaacaacgcttacatgatctactttgtcagcttcctgggcaccctggcggtgctgccaggca acattgtgtctgcgctcctgatggacaagatcgggcgtcttcgcatgttggccggctcgagcgtcatgtcttgcatcagc tgcttctttttgtccttcggcaaaagcgagtcagccatgattgccctcctttgcttgtttggcggggtcagcattgcctc ctggaacgccctggacgtcctcacggtggagctgtacccttcggacagaaggaccaccgcgtttggcttcctcaatgctc tctgcaagctggcggcggttttgggcatcagcatcttcacgtcgtttgtgggcatcacaaaagccgtgcccattttactg gcatcagcggccctggctgtgggcagctctctggccctgaagctgccagagaccagggggcaggtgctgcaatgagagtg ggcttctgaacaaaaccaagacacaaaccatatgtagctctgtctgtgcgcaagaccaactgacaaaaactttgtgctgt ggtgtagtttttagatgtttgtaaagaacaatttaaaaaaaaaaccaggaaaaaaaaacaacaacccatgtcaactgtag tctctgggtcatttcattttgtataaaccgagaagaagccaagaatgatgattagataggagttattttaaatgtcattg tgagaaacagtgattttttttttaaaaaaaagatgctttggctaatattatgtgtacagattgttcagcaggaaaaggaa atttggatgtttggctgaatcgagccatgttcccacgaccaccataatgaacttgtagtttaacaacaatccatgtaaaa aaacggagggaaataaaaagtttgaaaaatctaatgatc |
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Protein
| Protein ID | habu1_s2370_g08614.t1 |
|---|---|
| Definition | - |
>habu1_s2370_g08614.t1 MIKHLQNVEYASRTKVFNNETFRHITFNFTLENQIHRRGEYFNDKFIGLKMKSVSFIDSLFEECYFEDVTSSNTFFRNCT FLATVFYNTDLFEYKFIDSRIVNSTFLHNKEGCQLDFSDDNNAYMIYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGS SVMSCISCFFLSFGKSESAMIALLCLFGGVSIASWNALDVLTVELYPSDRRTTAFGFLNALCKLAAVLGISIFTSFVGIT KAVPILLASAALAVGSSLALKLPETRGQVLQ |
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| Protein ID | habu1_s2370_g08614.t2 |
| Definition | - |
>habu1_s2370_g08614.t2 MIKHLQNVEYASRTKVFNNETFRHITFNFTLENQIHRRGEYFNDKFIGLKMKSVSFIDSLFEECYFEDVTSSNTFFRNCT FLATVFYNTDLFEYKFIDSRIVNSTFLHNKEGCQLDFSDDNNAYMIYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGS SVMSCISCFFLSFGKSESAMIALLCLFGGVSIASWNALDVLTVELYPSDRRTTAFGFLNALCKLAAVLGISIFTSFVGIT KAVPILLASAALAVGSSLALKLPETRGQVLQ |
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