Gene
| Gene Model ID | habu1_s2370_g08619 |
|---|---|
| Locus | habu1_scaffold2370 : 385846 ... 414298 : + |
| To GenomeBrowser | habu1_scaffold2370:385846..414298 |
| Genes list of scaffold | habu1_scaffold2370 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| vacuolar protein sorting-associated protein partial | GO:0006904 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2370_g08619.t1 | 1 | 1 | Sec1 | 49 | 366 | 0.0 | 300.0 | 0.0 | 0.0 | 299.3 |
| habu1_s2370_g08619.t1 | 1 | 1 | PH | 531 | 638 | 4.9e-07 | 29.8 | 1.2e-10 | 5.9e-07 | 29.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2370_g08619.t1 | gi|602645387|ref|XP_007429133.1| | PREDICTED: pleckstrin homology domain-containing family O member 1 [Python bivittatus] | 0.0 |
| habu1_s2370_g08619.t1 | gi|686590076|ref|XP_009270841.1| | PREDICTED: vacuolar protein sorting-associated protein 45 [Aptenodytes forsteri] | 0.0 |
| habu1_s2370_g08619.t1 | gi|723132527|ref|XP_010282733.1| | PREDICTED: vacuolar protein sorting-associated protein 45 [Phaethon lepturus] | 0.0 |
| habu1_s2370_g08619.t1 | gi|697437041|ref|XP_009687880.1| | PREDICTED: vacuolar protein sorting-associated protein 45 [Struthio camelus australis] | 0.0 |
| habu1_s2370_g08619.t1 | gi|705689590|ref|XP_010121752.1| | PREDICTED: vacuolar protein sorting-associated protein 45, partial [Chlamydotis macqueenii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 10.2 |
| Venom grand-1 | 23.0 |
| Pit, infrared sensing | 7.9 |
| Nose | 9.8 |
| Brain-1 | 10.9 |
| Eye | 12.3 |
| fetal fibroblast | 12.9 |
| venom gland-2 | 38.1 |
| Brain-2 | 18.1 |
| Spleen | 8.3 |
| Lung | 9.6 |
| Liver | 8.9 |
| Kidney | 6.0 |
| Pancreas | 9.2 |
| Small intestine | 7.2 |
| Large intestine | 7.8 |
| Stomach | 7.3 |
| heart | 9.9 |
| ovary | 5.6 |
| cheek muscle | 18.8 |
Transcript
| Transcript ID | habu1_s2370_g08619.t1 |
|---|---|
| Definition | - |
>habu1_s2370_g08619.t1 atattctcagctctattaagtggattcaaaggctccaaggagttcattcttttgcagaggaaaaatgactggagaggttg tatcttatcccaaattcctatgcatcaaatatagaagaggctctttcatagagaattctagagaaattcacttccgctgt ttaaaaagaagcgttggatgcagcgccatacaactgactagcactgatttcagcaatgtgatcagtaagagtgacgtcaa gtctttggcagaagctgacgagcaggaagtggtggctgaagtgcaggaattctatggagattacatcgctgtgaatccac acgtgttttctctcaacctccctgtctgctgtcagggccgcaactgggacccggcccatttgtgcaggaccgctcagggc ctcaccgccttgcttctttccctgaagaagtgccccatgattcgttaccagctctcctctgacttggctaagaggctggc tgaaggcgtcaagcaagtgatcacgaaagagtacgaactgtttgacttccgtcgcaccgaggtccctccgctgctgctgc tcctggaccgctcggacgacgccatcactccgcttctgaaccagtggacgtaccaagccatggttcacgaactgctggga attaacaacaaccgcattgatctctcacgggtcccaggcatcagcaaagacctccgggaggtggtcctgtctgctgagaa cgatgagttttatgccagtaacatgtacctgaactttgcggaaattggcagcaatatcaagaacctgatggaggatttcc agaggaagaaacccaaagagcagcagaaactagagtcgattgcagacatgaaggcctttgtggagaactatccccagttc aagaagatgtctggcaccgtctccaagcacgtgacggtggtgggggagctgtccaggctggtgagcgagaggaacttgct ggaggtgtccgaggccgaacaggaactgtcctgtcagaatgaccactccggggctctgcagagcattcgacgcctcctgc agaaccccagagtgaccgagctggatgctgtccggctggtgatgctctacgccctccgttacgagcgacacagcagcaac agccttccaggcctcatgctggatctcaagaaccggggtgtttctgagaggcttcgcaaggagctgagcgtagagcctga ccctcctgccctaggatgctcgctgcaggaagacaagatggcgggaaggaaatcactcggcctccaggagtcccgttctt cccctcgtgggcccaactcccaatctgagcagggactcctctggagcgcaagtcctgccaggagaaaaggtgcaagagcg aagtggctgctgttgtctacgccaggactctgggaggtacaccatgacagccaactgactcaaacaaagaagaaacggtc cctccctcccagcttcatttgcctctttccttgtggaaacagatcttcaattctctgcccggcaaagaccctgcctcccc cccccacataccctctctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn aattcggctaaacgggggttccaggaggggaaccagcaagtgctgcagcctgagaaggtgggctgggtccgaaaattctg cgggaaaggcatttttcgggagatttggaaaaatcggtttgtggtgctgaagggcgaccaactttacatctcggagaagg agctcagagatgagaaaaacatccaggaggtgtttgacttgaacgattacgagaactgtgaggagctcaggaaatccaaa agcagaagcaaaaaaaactatagcaagttctcgctcgcccactccaaggagcctggcaacacagcacccaatctcgtctt cctggctgtgagccccgaagaaaaggagtcttggatcaatgtgctcaactctgccatcatccgggccaaaaaccgcatct tggacgaggtgacagtggaggaggagagcttcctcgcccaccccactcgcaacagagcgaagatccagcactccaggcgg cctccgaccagaggccacttgatggctgtggcatctacctcaacctctgatgggatgctgaccctggacttgatccagga ggaggatgcctccccagaagacctcgacacctgtgagaagagtttccgggtggacgtggacaaatcagccgctcatctca cccctggccgaagacgctcggattcggagaccatcaaggagaagagcaagacaaacagtctcccacggaggaaggacacg actggggagaggttctccgctcacagggaagcctttggcaaaggggccatgtacacccctcaggtccccaagaagctctc tcccttggagaagaacaaatgtgcctcgatggaagaaatcctctcctgctgggactcttcctcggctggccaggcgtggc tgaggagcggcctcaaggaccggggggcttcccctgagccccagcagctggccaggatacaggagctggtggccttgcag ctggagaagacgcagggcctgctggcggaagcgaagggctacggggcagaggcgcaaaaggcaccggggctcgcctgcgc ctctcctgtggcccccgcctgcgcctccccctcccccaggctggactcggaggccgccttgcaggagatccagaggttgc tgggcgaggcctcctcttactggagccaagcccagaaagtgctgcaggaggtgacagaactgaggcgcctctaccaacaa cttcggctctcgccccctgcgcccccgggggggctgcggccgccacctcagtgcaggaggagcctgatgtgaaggcaagc ggcgtggggcgacctctcgggaaaacggggcgcagggcagccgacaggagggtgcagacattggggagcggatgcgccgc ttgcatttgtagcactggatgcttccccgggttccggcggttactcaatccttactcttcaccaactc |
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Protein
| Protein ID | habu1_s2370_g08619.t1 |
|---|---|
| Definition | - |
>habu1_s2370_g08619.t1 MTGEVVSYPKFLCIKYRRGSFIENSREIHFRCLKRSVGCSAIQLTSTDFSNVISKSDVKSLAEADEQEVVAEVQEFYGDY IAVNPHVFSLNLPVCCQGRNWDPAHLCRTAQGLTALLLSLKKCPMIRYQLSSDLAKRLAEGVKQVITKEYELFDFRRTEV PPLLLLLDRSDDAITPLLNQWTYQAMVHELLGINNNRIDLSRVPGISKDLREVVLSAENDEFYASNMYLNFAEIGSNIKN LMEDFQRKKPKEQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVSERNLLEVSEAEQELSCQNDHSGALQS IRRLLQNPRVTELDAVRLVMLYALRYERHSSNSLPGLMLDLKNRGVSERLRKELSVEPDPPALGCSLQEDKMAGRKSLGL QESRSSPRGPNSQSEQGLLWSASPARRKGARAKWLLLSTPGLWEVHHDSQLTQTKKKRSLPPSFICLFPCGNRSSILCPA KTLPPPPTYPLXXXXXXXXXXXXXXXXXXXXXNSAKRGFQEGNQQVLQPEKVGWVRKFCGKGIFREIWKNRFVVLKGDQL YISEKELRDEKNIQEVFDLNDYENCEELRKSKSRSKKNYSKFSLAHSKEPGNTAPNLVFLAVSPEEKESWINVLNSAIIR AKNRILDEVTVEEESFLAHPTRNRAKIQHSRRPPTRGHLMAVASTSTSDGMLTLDLIQEEDASPEDLDTCEKSFRVDVDK SAAHLTPGRRRSDSETIKEKSKTNSLPRRKDTTGERFSAHREAFGKGAMYTPQVPKKLSPLEKNKCASMEEILSCWDSSS AGQAWLRSGLKDRGASPEPQQLARIQELVALQLEKTQGLLAEAKGYGAEAQKAPGLACASPVAPACASPSPRLDSEAALQ EIQRLLGEASSYWSQAQKVLQEVTELRRLYQQLRLSPPAPPGGLRPPPQCRRSLM |
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