Gene
| Gene Model ID | habu1_s2388_g08675 |
|---|---|
| Locus | habu1_scaffold2388 : 242776 ... 261332 : + |
| To GenomeBrowser | habu1_scaffold2388:242776..261332 |
| Genes list of scaffold | habu1_scaffold2388 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2388_g08675.t1 | 1 | 1 | Cyclin_N | 36 | 141 | 3.2e-17 | 62.2 | 4.3e-21 | 3.2e-17 | 62.2 |
| habu1_s2388_g08675.t1 | 1 | 1 | Cyclin_C | 143 | 257 | 1.6e-23 | 82.8 | 3.0e-26 | 2.3e-22 | 79.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2388_g08675.t1 | gi|602628219|ref|XP_007421047.1| | PREDICTED: cyclin-J-like protein [Python bivittatus] | 0.0 |
| habu1_s2388_g08675.t1 | gi|530616611|ref|XP_005298053.1| | PREDICTED: cyclin-J-like protein [Chrysemys picta bellii] | 0.0 |
| habu1_s2388_g08675.t1 | gi|557275951|ref|XP_006021140.1| | PREDICTED: cyclin-J-like protein [Alligator sinensis] | 0.0 |
| habu1_s2388_g08675.t1 | gi|564242069|ref|XP_006277842.1| | PREDICTED: cyclin-J-like protein [Alligator mississippiensis] | 0.0 |
| habu1_s2388_g08675.t1 | gi|591364822|ref|XP_007057309.1| | PREDICTED: cyclin-J-like protein [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.3 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.1 |
| Nose | 0.9 |
| Brain-1 | 0.1 |
| Eye | 0.1 |
| fetal fibroblast | 0.2 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.3 |
| Spleen | 0.1 |
| Lung | 0.0 |
| Liver | 0.2 |
| Kidney | 0.1 |
| Pancreas | 0.0 |
| Small intestine | 0.2 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.3 |
| ovary | 5.3 |
| cheek muscle | 0.3 |
Transcript
| Transcript ID | habu1_s2388_g08675.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08675.t1 aagcccagcaataaaaagggggggggggtgtgagtgtaggcagaggaagcgggaaaggactacaacgtccagaggcccag tggaaggaaggtgtgcgcgtgcgtaaagtagaaagccggatttttcttgcaaagaagtcgtcggattcaggaaaggacaa aggctgtcgctttgcgggcgatcggcaaaggtgctagcttttccttggatgagaagtctaaggatggaagagccatggtg gaaaggagaccttgcagcagacgttcaccagactctgagactgaaggagctgaaactgccggtctacaaggcccattctc cacaaatcgaaagacggtgctactttgctcacctccttactgtcctcagcagccattgccaactttgtcccacagctcgg caccttgctgtctacttgctggacctttttatggatcgctatgatgttacagtgaagcagttatatgtcgtttcaattgc gtgtcttctccttgcaagcaaatttgaagagaaggaggataaagtgcccaaactacaactgctgaacaactttgcttaca tgtgcagccttaatctaatgcttacgaaaaaagacctactgaagatggaactgttgctcctggagagcttcaattggaat ctgtgtctgccaacgccagcacactacattgactactacctctttgcttctgtcagtgagagtgacctccacaaaggctg gcccatcacctctgtaaccaagttcagagccatcatggagaaatactctcactcgttcctagaagcttcactgcaagatc atgtttttctttcttttcgaccttctcttgttgctgctgcttgtgtgggtgcctcccgcctctaccttgagatgtctccc ttgtggaccacccaacttcagctgctgacatgttattcctgggaacaccttattccttgcattgaacttatgcttggcaa agttcatagtaaggatcccagagaagacacacagaaaaaggattgcatggccctgttgcaacaacgacagcagcaggaaa taatggaaagcctaacactccagacgccaactcaggttctcttccatcagccacagtaccatcccctgccccaaccctca gctgtcctgtcgcagttctgttctccaatacaggatctgtgctccgcttatcgggattccttgcaagctcctcgatctag tggcctcagttcagggaacagtaggctgagtacttattctgccctgcaggagaatttgcagaccgtgtctatccaagggc caatcacgatgcagagagaaagtgaagaatttttaactgaagaagggagtgctgcttttaatgtaggagaagaatgtttc cttttcattgaaaagtctggtgcatttaagcagacagtagccaattgtgtaaaaaccactggagaagctcaagcttatag aattcggcctgactatttcatgaagtcctgtaaagaagatgtttttgtgtattgattttttttgtttctatcttaagaaa gtttattgaataaaaaggacaaaacatcaatgggct |
|
Protein
| Protein ID | habu1_s2388_g08675.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08675.t1 MEEPWWKGDLAADVHQTLRLKELKLPVYKAHSPQIERRCYFAHLLTVLSSHCQLCPTARHLAVYLLDLFMDRYDVTVKQL YVVSIACLLLASKFEEKEDKVPKLQLLNNFAYMCSLNLMLTKKDLLKMELLLLESFNWNLCLPTPAHYIDYYLFASVSES DLHKGWPITSVTKFRAIMEKYSHSFLEASLQDHVFLSFRPSLVAAACVGASRLYLEMSPLWTTQLQLLTCYSWEHLIPCI ELMLGKVHSKDPREDTQKKDCMALLQQRQQQEIMESLTLQTPTQVLFHQPQYHPLPQPSAVLSQFCSPIQDLCSAYRDSL QAPRSSGLSSGNSRLSTYSALQENLQTVSIQGPITMQRESEEFLTEEGSAAFNVGEECFLFIEKSGAFKQTVANCVKTTG EAQAYRIRPDYFMKSCKEDVFVY |
|