Gene
| Gene Model ID | habu1_s2388_g08677 |
|---|---|
| Locus | habu1_scaffold2388 : 298786 ... 322970 : + |
| To GenomeBrowser | habu1_scaffold2388:298786..322970 |
| Genes list of scaffold | habu1_scaffold2388 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2388_g08677.t1 | 1 | 1 | PWWP | 659 | 741 | 3.1e-13 | 49.7 | 2.1e-17 | 3.1e-13 | 49.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2388_g08677.t1 | gi|327281048|ref|XP_003225262.1| | PREDICTED: PWWP domain-containing protein 2A [Anolis carolinensis] | 0.0 |
| habu1_s2388_g08677.t1 | gi|602628217|ref|XP_007421046.1| | PREDICTED: PWWP domain-containing protein 2A [Python bivittatus] | 0.0 |
| habu1_s2388_g08677.t1 | gi|699681538|ref|XP_009902957.1| | PREDICTED: PWWP domain-containing protein 2A [Picoides pubescens] | 0.0 |
| habu1_s2388_g08677.t1 | gi|564242083|ref|XP_006277849.1| | PREDICTED: PWWP domain-containing protein 2A [Alligator mississippiensis] | 0.0 |
| habu1_s2388_g08677.t1 | gi|557276005|ref|XP_006021167.1| | PREDICTED: PWWP domain-containing protein 2A [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.3 |
| Venom grand-1 | 2.1 |
| Pit, infrared sensing | 2.3 |
| Nose | 2.4 |
| Brain-1 | 2.6 |
| Eye | 2.8 |
| fetal fibroblast | 2.9 |
| venom gland-2 | 1.7 |
| Brain-2 | 2.7 |
| Spleen | 2.1 |
| Lung | 2.6 |
| Liver | 1.5 |
| Kidney | 2.5 |
| Pancreas | 3.0 |
| Small intestine | 2.0 |
| Large intestine | 1.9 |
| Stomach | 2.6 |
| heart | 2.6 |
| ovary | 25.4 |
| cheek muscle | 3.3 |
Transcript
| Transcript ID | habu1_s2388_g08677.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08677.t1 gcattaaaaaggttgagaaccactgtcttagggtcatgcccctacccagctatggacatcctggggctatgtggggcaga tttttttcagctcaaccttgtacagagggaggaggaagcgacaccagagaaaatggcggccgtggctgcgactgcggcgg tgccgggtgatgggggagctggcgaggtcgagcccatgccaggcagcgaagccggcgcagacgcgctccctgccggcacg caggctgccgtggagtcggcggtgctcgacgccagggaggatcccgagccagccccgggcggagaggctcagcagccgcc gtcgccgcccaagagcccagcggggacccgagacctgccgcaggcccagcccaacccgggccccgtgggcgagcttcttc agcctcgctcgctcacggcgaccctctccggccattctgaaaaggaggaggcagacgagcagcccccgcagcccgccttg ccgctggtacctccgctgctgcttgcagctgggggccccgcggggccggagcccggggaggagccgccccggccggagga ggaggagccggatgctgccgtcgccgccgccgccgccgccagtaccaccacaagcgttgcaaagcaaccggagctttcgg cctttatcgcctcctgggtggctgcacagaaagaacttgcatcagagcgttctgtgaaacaccctttaatcgagttcatc aggtttggacctcacgggattcctgtgactatatttcccaaacgggagtacaaggataaacctgatgccatgcagctcca aagtaaatcattccaagatgagacgcaagtgaaatgtgaagctaacggtgttgtcacagactcttctcccatccagccat cagaacatagcctggttaaaagcctatggacttccaacccgcctccccttttccatgtgggggctccatatcctcctcct ttgtttatcagggacacatataaccaatcaatacctcaacctccacctcgaaaaattaagcggcccaagcgaaaattgta cagggaggaacccacttctattatgaatgctatcaaattgcgacccagacaggttttatgtgacaaatgtaagaacagtg ttgttgcagaaaagaaagaaattaagaagggcagcaatgcaagtgactcctcaaggtgtgaggatactaggaaacgaaga aatgagagcgtaactactgtgaataaaaaaattaaaactgatcataaagttgatgggaaaagtcagagtgaaagccagaa aaagaattctgtggtcaaagttgcaaatattgtccacaacagaagcagagtagtcaaagttcccactcaagcaaatacat caaaaaaccaattgaatactaaaaaagttcttcagagcaaaaacatggatcatgcaaaagctagggaagttttgaaaata gccaaagaaaaggcacaaaagaaacagagtgcaacttcagcttccaaaaatgcacattcaaaggtccacttcacgcggcg tcttcagaacaccagctcaggttctctgcctccccgattgcgtctgaagccacaaaggtaccgaaatgaagaaaatgact cctctctcaagacagggctggagaaattgcagagtggcaagatggcagctaagccccagtctcgctgctcgtctacccgc tcagcaggtgaggccccttcagaaaatcagagcccctcagaaggtcctgaagaggccagcagtgaggttcaggacacaaa tgaagtgcatgtacctgttgatcaggatgaacagcagaccatgggcaagagaggcagcaaaagcaatattacagtttaca tgacccttaataaaaagcaacctgactcttccagtgcatcagtctgtagtagtgatagcacagatgacttgaagtcctcc aattctgagtgtagcactactgaaagctttgattttcctccaggcagcatgcatgcaccttcttcctcttcctcctcctc ctcctcctctttaaaggaagagaaaaagctcagtaattctttgaaaatgaaagtcttttcaaaaaatgtctctaaatgtg tcacaccagatggcaggaccatatgtgtaggagacattgtttgggccaagatatatggcttcccctggtggccagcccgt attcttactataactgtgagccgaaaagataatggcctattagtccgacaggaagctcgtatttcatggtttgggtcccc aacaacatcttttcttgctctttcacagctctccccctttttagaaaactttcagtcgcgatttaataagaagagaaaag gtctttaccgcaaggccattacagaagcagccaaggctgctaagcagctaactcctgaagttcgggccctgctgacacag ttcgaaacatgaacaaagtaagattatccttccttgcttccggtgtcattttagcttaagacatcagtagctatgtattt aacatagtatattagggagtctattacttgaatccaaggtacagaaaaatattagcattagatttctattggctatgtta gggtttcctggttttacatacgagtttaggattgctcatctcaatgcatctcatggctaacactacaaataaattctggc acaaattatttcaaagcaaacaatagtatgactaaatggtctggcagatgtcatgcagaagaggacatagttgcttttaa tttttgaacaataccatttgggacaaatctatattttagaagaattagaagacactggattataagaataattttctcct tttttccgtatgattttgtgtatcttttattcattttttttctaaaagtttcatatatttatagagaatatatttcaatg cttttttcattttggtacctgctcttttcaccttttctacaatatcaatagtttccagcagaattcttcatcttcatggc agtcataaactaagtatcttttttttaaagcatccccaacacattctcttacattatctggattccacccaaatatgcat tacttcacttttttataaggacttttcctccagttatgataaattgttttgagacttttcatcatcattccatcactttg aaagcattaaattccaaactgaacgtttattcactgtgttctgtccttcaagcttttgtcaatccaggagttattttttc atgtcatcaagatggaaggaacgtcacatgcattgtcatatacattatacaaattatgcaatctgcctccttggcattat gattatagtataacatacatctctgtaatttggaccagatgctatggtcatgatgactataattttatagtctataaatt atgattcaaacatggattagagactttgttaaagtattttgtgactatagctgtcatttgatgaataagcaagtctccat atggctattttgagtgtgtgcctaacacatgatctcaaattcaagtgtgctcccccacgcccactaataagtggcatatt cctggcctaaacatgcacttaccacttcctatttgtaaaatgttagtggaataaaacttttttatagatgttgatttttc ttctgcaagacttgtcttatcagactagatattaacccaatttatctgtaattttctagcattatgctattttctccact tgttttaatacaaagataaatctaggataatgccacctatttttattttttaaaatatcaaccatttcatatttgaatta agaactcatgaataccatctggatcaagtttgggcagggggaggggatgtctggatctagcttttgggataatcaaaact ttctatttagggtataatccctactcacaaatatttaccataattcctcaaattgctttcctaaaaatttcagttttgat gagtagttgcaagactaattctgtaatggactacgacgaagagtaagcttttctgcaattgccttatttttttaatattc ttttaacgtccttgatgccaaatagtccagctgcctcttactttcctgatatttttttctttgtccattttaatgttata aagcattcaaaatcttttgagttttatcaaacatacttttcttgacttctaatttaaacatgatttttaattatattttt aacaaatccaacttttatcatatatcattgatggtatggctcaaaaatgagacaattggatattttaaacatgtggatgt tagattacctatattatgaaatccctagaggatcttcaaagtacactcgcctccattttcctatggaatccaatcataga gaattattttataaaggttacaaaatataagagaaaggaaaaattgccaatgacacattgtgctagctatgttattgagt ttaaattttttcaatattgtttcagtggaacaaatttgtatccatttaaaaaaaacaaccagttctataataatagtatg aacttgtgaaaataagcttacactataaattcatatttttctttttcagctcagagacattaatcatctgctgtatttat ggaactctcttgcactggcatgaagtctgtcagctaaccagaaattacatacacctgatatgccactttcctctgcaatc cagaacatggtgtatgctgacatacttctttaaaaaacgaattgtaccccatttccaggaaacctgtatgtgttgtacct ttaatttcaaaactaaaatgttgatattttataaactatttttgcaataaacaaaggcatgaaccaaggaccctattcaa cacataaggagcaacttgaagtacgaggatgaaggatcacgaagtataatattactcttcaaatacaattgtctgaatgg gcatcagtaactgaccgagacacctggaatgttggctgtaaaactctgaacatttacttttgttcttagtatgtgttaca ttttacatcttgacaaacattagtctttagtgcaagtgttagcagagctgtaatcctttactggaagcatgtccaaattc aactgtgttaataagtgctgacagatgtgttctgagacttaaggttttccataaagaaagcagcaaggggcaaaaataaa taactctaccttgagtaattgtggcaaagaccatcccttttggaaatagtttgatggctagaacagaggctcgtttttaa aatgagcagtgaaagagactgtatcacaaggtacagatcttgtatctgcttgtgtccgcccagcagtttctgccacaaac aggtactgttaagatggaatagtaattggtatccaaagtcatgacatttctttttatagcacagtgatgtattgcacatt aagttagtcataactaacatgttccactgagacttccttggcattttaagtttagctgatttacacaggaaagtttccta tcccaggaagcctctaatcttttctcaacaggacttgagtctttaacagcaatgtggtttcacatttcaatgagaataag ttatgccaaattttcactggattacactgaaagcctaaaagaattacttgttcagtatttttaaactgcttctcattttg aaagtatgcaaatccttgcgtcggcagcaaaatccaacagttagcttgacaaagtgatgtcaaaaaaatgcacaatatat agattgatataattaacagttttcatgtgaatacaaggatgccttcttaatatatagatttcagtctttaggatattaaa atacattaaactaaattttttt |
|
Protein
| Protein ID | habu1_s2388_g08677.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08677.t1 MAAVAATAAVPGDGGAGEVEPMPGSEAGADALPAGTQAAVESAVLDAREDPEPAPGGEAQQPPSPPKSPAGTRDLPQAQP NPGPVGELLQPRSLTATLSGHSEKEEADEQPPQPALPLVPPLLLAAGGPAGPEPGEEPPRPEEEEPDAAVAAAAAASTTT SVAKQPELSAFIASWVAAQKELASERSVKHPLIEFIRFGPHGIPVTIFPKREYKDKPDAMQLQSKSFQDETQVKCEANGV VTDSSPIQPSEHSLVKSLWTSNPPPLFHVGAPYPPPLFIRDTYNQSIPQPPPRKIKRPKRKLYREEPTSIMNAIKLRPRQ VLCDKCKNSVVAEKKEIKKGSNASDSSRCEDTRKRRNESVTTVNKKIKTDHKVDGKSQSESQKKNSVVKVANIVHNRSRV VKVPTQANTSKNQLNTKKVLQSKNMDHAKAREVLKIAKEKAQKKQSATSASKNAHSKVHFTRRLQNTSSGSLPPRLRLKP QRYRNEENDSSLKTGLEKLQSGKMAAKPQSRCSSTRSAGEAPSENQSPSEGPEEASSEVQDTNEVHVPVDQDEQQTMGKR GSKSNITVYMTLNKKQPDSSSASVCSSDSTDDLKSSNSECSTTESFDFPPGSMHAPSSSSSSSSSSLKEEKKLSNSLKMK VFSKNVSKCVTPDGRTICVGDIVWAKIYGFPWWPARILTITVSRKDNGLLVRQEARISWFGSPTTSFLALSQLSPFLENF QSRFNKKRKGLYRKAITEAAKAAKQLTPEVRALLTQFET |
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