Gene
| Gene Model ID | habu1_s2388_g08678 |
|---|---|
| Locus | habu1_scaffold2388 : 322996 ... 348305 : - |
| To GenomeBrowser | habu1_scaffold2388:322996..348305 |
| Genes list of scaffold | habu1_scaffold2388 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2388_g08678.t1 | 2 | 1 | TPR_11 | 103 | 172 | 1.3e-22 | 79.2 | 5.1e-19 | 4.0e-16 | 58.4 |
| habu1_s2388_g08678.t1 | 3 | 1 | TPR_1 | 106 | 133 | 3.5e-21 | 73.8 | 1.4e-07 | 0.00011 | 21.6 |
| habu1_s2388_g08678.t1 | 3 | 1 | TPR_2 | 107 | 133 | 1.2e-16 | 59.1 | 1.5e-06 | 0.0012 | 18.6 |
| habu1_s2388_g08678.t1 | 3 | 2 | TPR_1 | 143 | 174 | 3.5e-21 | 73.8 | 5.5e-11 | 4.3e-08 | 32.4 |
| habu1_s2388_g08678.t1 | 3 | 2 | TPR_2 | 143 | 174 | 1.2e-16 | 59.1 | 7.9e-08 | 6.2e-05 | 22.6 |
| habu1_s2388_g08678.t1 | 2 | 2 | TPR_11 | 159 | 205 | 1.3e-22 | 79.2 | 5.9e-11 | 4.6e-08 | 32.5 |
| habu1_s2388_g08678.t1 | 1 | 1 | TPR_17 | 164 | 195 | 1.0e-05 | 25.3 | 3.7e-07 | 0.00029 | 20.7 |
| habu1_s2388_g08678.t1 | 3 | 3 | TPR_1 | 176 | 205 | 3.5e-21 | 73.8 | 1.5e-07 | 0.00012 | 21.5 |
| habu1_s2388_g08678.t1 | 3 | 3 | TPR_2 | 176 | 205 | 1.2e-16 | 59.1 | 1.2e-06 | 0.0009 | 18.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2388_g08678.t1 | gi|602628201|ref|XP_007421038.1| | PREDICTED: tetratricopeptide repeat protein 1 [Python bivittatus] | 0.0 |
| habu1_s2388_g08678.t1 | gi|327281046|ref|XP_003225261.1| | PREDICTED: tetratricopeptide repeat protein 1 [Anolis carolinensis] | 0.0 |
| habu1_s2388_g08678.t1 | gi|700330298|ref|XP_009912018.1| | PREDICTED: tetratricopeptide repeat protein 1 [Haliaeetus albicilla] | 0.0 |
| habu1_s2388_g08678.t1 | gi|344265213|ref|XP_003404680.1| | PREDICTED: tetratricopeptide repeat protein 1 [Loxodonta africana] | 0.0 |
| habu1_s2388_g08678.t1 | gi|149726139|ref|XP_001503524.1| | PREDICTED: tetratricopeptide repeat protein 1 [Equus caballus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.8 |
| Venom grand-1 | 8.2 |
| Pit, infrared sensing | 6.8 |
| Nose | 5.2 |
| Brain-1 | 6.6 |
| Eye | 6.8 |
| fetal fibroblast | 10.8 |
| venom gland-2 | 7.4 |
| Brain-2 | 7.4 |
| Spleen | 4.8 |
| Lung | 6.4 |
| Liver | 5.5 |
| Kidney | 7.1 |
| Pancreas | 6.4 |
| Small intestine | 6.2 |
| Large intestine | 6.4 |
| Stomach | 7.7 |
| heart | 14.1 |
| ovary | 26.4 |
| cheek muscle | 42.4 |
Transcript
| Transcript ID | habu1_s2388_g08678.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08678.t1 ccccccagtttcaggaagaagttcgcaagaagtcaggtcggcgggcggaggttgagtggcctgcttgtgcgggcgcgggg tgggagtggttggagctcgaggagaggctgctgatgagggggagagacctggtagagtcaggttcagcatggcgtctgaa gatgctgtcgctcctgaaaaattaattgaggatttgaaactctcagaaaaacagagcagtcctgcacatcatgcatatgt ccccagagtcgttaaagaaggtgtgagtgaaggcagagaggatgatgatcttttccatgactgcaaagactctcttgaat caagagtggtggaagagaataacaacagcgaggcagattctttagaaaatgaggtggatctagatgaaaaagaattgctg gaactggaaaaaaacatgtcagaggaagaaaaagaggcaagaagaaacgaaagctcaacattaaaagatgaaggaaataa acagtttaaaaatggagagtataaagaagcagaagactcgtatgcaaaagccctgcgtgtttgtccagcctcctgtagcg cagagagatccattttgtattcaaatagagccgcagcaagaatgaaacaggacaagaaagaaatggctataagtgactgc agcaaagctctagagttaaacccaaactatatcaaagcactgttgaggagggcagaactatatgaaaaaacagaaaaact agatgaagctttagaggattacaaaaatctgttggaaaaagattcatcggtatatcaagcaagggaagcttgcatgagat tgccaaaacaaatagaagaacgtaatgaaaaacttaaggctgagatgttaggcaagctgaaggatcttgggaacctggtt ctccgtccttttggcttatcaacggaaaacttccaagtgaagcaagattcatcatctggctcctactctatcaactttgt tcaaaatccaaataacaacaaccgataacactagcccaaactgcatgtggcaaaatcttgagctttgatgcttaatggtt agagtggagactggaaaggcgattatttgattgcccagtgtgaaactatacagaagagatgttggtatggcttaagagat gtgtgatatggtagccatcatacacttaccttttaaagttctgctcataggagaggcaaaaacaggatggacctgggaag tacctgagaggctcattaccagcggacttgcaattactagtggttgaagatataggatgtttcgatgaattggcaattgg aaagggaatttaagacttgttcaacagtttagtattagcaataaagtagaagagaccgagaacatcaacagcatattagt atgtgctactatttgccagttagaagatggtggagttggaagtggaaatccctattatttctctctgggtgtgcctgaaa gtcacaacagagaatactgtcttcgaagtttgggactcactacaaagagagagatattgtctggccatggtgttgaacat ttttggatgaacccttaaaagactgaatctctttgatacttaaggtgatgcctgattttcacctacatcatatttttaac ctaagcgtgctgcctttgtatacagataggggaattcactaggtgtgaatagataggttatctatctgagtgaggttgca ggaagaggcaggattctctcaaagtagtagtgggatggtaatctggaatttagagattccaaagagatactagatggtga aaaaaaaagtagtgaattgggcacagagtataagtggtggcaccagattactgatctccacatgtgattgatggattgtt tgagtgggatgattgaaattagttggtggccttggactgagagaatagaagttaagtggagagagtaacatgatcctact agtgacagattggggaagatatgatgcaggatgctaggtttgctgttctaagggaaagagattgctggtaatctccactt ctggcacagtagccccacactgggcttttggcagttggattgttaatggtaactgtaatgagtctgtgcttatctatagc ttgatggaggaggaacaggtagatctcctgtgtcttactgggacctctctgagcaagggcaccaatgttgttctcttgga gattcattctattgtgtttcatgttgttcatcaactagtgtcaggaagggagcagtgccattgatctataaaaatacagt gagcaaatgtaagtgccaatttattacactgagctgtaagaacaagttaaagatcctgctggctgatcagcatgatcttt caatggtttctggacctgatgatattggcattggagtcatctggcttattgatactgggcggtttcagttaccatgtctt gaatgttgggtctggacagatttaggaatacatgacctccaagcaactatcactttgtctcttgtgatctcaggcccaac atattaagacaaaacttcagaacagttgtttagtgatctgcatatggagaatataacatttagttatttgccctgatcag atcacttcctggccaagataatattgctatccgtgacctctgtggggtgaagaagcatattcatatggcttgtcccatat gctttattgatccagatggattatgggaggggcacttgaataatttcccacagcttggcaataggggaccacctggactc tcagtgagattggtatttggcagcactcaaaagcaatctacagtgtttcaccaaagttttcaagatatctagcccattaa atggcttacccgcttatcaccgagacaaattaaattacaactataagcaaactagactggagaataatgaggaaaataat accatctatttaaaagtaaggagacatgttgtattctcctgttgcagaaagatacttcctcccccttaccttacctaaaa ttataaactctagaagtggtgtaatctacattgctcagaaagcaactgtcttctgttggaattgctgttagctagttctg cttaatattacaactttcattaatcttttactgtcaaaagaaccaaacacatgaagagacagcaacattgcttctgataa ctttttaaaagtgcagagaaaacaaatcaacattttagttcaaaacatggtacacaacaattcttgaatatttaacttca ggcaaaactgtaaaagtttaatatttttccttattcaagtctaccaaataaaggaggcgtagtgacataatatacagaca taaaaggtaacatgaagcaaagcttaaatattaagcaactaaagaaaaaagtgaaaagcaatagattacttctaccacta aaaatttccctgacagcataatctcaaaatgaaaccaacgtggttgcagttcaattcttcatgagcaatataaatagtca tcttatctctattccaaacttagcccccttcttctccacatcattgaattacggtggtaaaataggcagaattggtgtgt gtgtgaagaaaaataaaaacagctctggctaacagtgggatgttgtctatgcaggcactattggctctacccataatcaa tatatgtaccctcgtttgtatagattgataccattttcctgagtagaaacttatcactttgtgccatggtgactccctca agctttgtgcatttttcaagcaaaaacacatcattttaaattaagatgctttttaaaaagcatttttcctccagaataga taacaccgcattatatcattaaagtttcttttagccttttctaataaccttttttgaatgaaaaattgtaaaaaaaagaa agcttataccatttctcttttgctttaacatcagtgaaaagagtactgcagaacctttaaaagtcaccaaatttcttatg aaagtgggcacaattgaaattactgttagtcattattaagcagggctttttttaagtaggtgctctggaatctataaata ctttttaaaaatgttttcacagataattattaaatctttcaatatagacttgtaataaacatcttccccttgtttcaaat gctatttaaaatataaatctgttactaaataaaataaagaggaaaagttatgattgcaac |
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Protein
| Protein ID | habu1_s2388_g08678.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08678.t1 MASEDAVAPEKLIEDLKLSEKQSSPAHHAYVPRVVKEGVSEGREDDDLFHDCKDSLESRVVEENNNSEADSLENEVDLDE KELLELEKNMSEEEKEARRNESSTLKDEGNKQFKNGEYKEAEDSYAKALRVCPASCSAERSILYSNRAAARMKQDKKEMA ISDCSKALELNPNYIKALLRRAELYEKTEKLDEALEDYKNLLEKDSSVYQAREACMRLPKQIEERNEKLKAEMLGKLKDL GNLVLRPFGLSTENFQVKQDSSSGSYSINFVQNPNNNNR |
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