Gene
| Gene Model ID | habu1_s2388_g08681 |
|---|---|
| Locus | habu1_scaffold2388 : 380216 ... 389201 : + |
| To GenomeBrowser | habu1_scaffold2388:380216..389201 |
| Genes list of scaffold | habu1_scaffold2388 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| PREDICTED: peroxiredoxin-2 [Python bivittatus] | EC:1.11.1.15 GO:0019430 GO:0042981 GO:0051920 GO:0055114 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2388_g08681.t1 | 1 | 1 | AhpC-TSA | 8 | 140 | 1.10001e-40 | 138.1 | 1.96182e-44 | 1.4e-40 | 137.8 |
| habu1_s2388_g08681.t1 | 1 | 1 | Redoxin | 9 | 149 | 6.1e-17 | 61.5 | 1.0e-20 | 7.7e-17 | 61.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2388_g08681.t1 | gi|602628195|ref|XP_007421035.1| | PREDICTED: peroxiredoxin-2 [Python bivittatus] | 0.0 |
| habu1_s2388_g08681.t1 | gi|327281020|ref|XP_003225248.1| | PREDICTED: peroxiredoxin-2 [Anolis carolinensis] | 0.0 |
| habu1_s2388_g08681.t1 | gi|573887560|ref|XP_006631553.1| | PREDICTED: peroxiredoxin-1-like [Lepisosteus oculatus] | 0.0 |
| habu1_s2388_g08681.t1 | gi|657540054|ref|XP_008276119.1| | PREDICTED: peroxiredoxin-2 [Stegastes partitus] | 0.0 |
| habu1_s2388_g08681.t1 | gi|657761864|ref|XP_008315854.1| | PREDICTED: peroxiredoxin-2 [Cynoglossus semilaevis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 13.5 |
| Venom grand-1 | 3.2 |
| Pit, infrared sensing | 16.7 |
| Nose | 6.4 |
| Brain-1 | 29.6 |
| Eye | 13.2 |
| fetal fibroblast | 38.2 |
| venom gland-2 | 1.9 |
| Brain-2 | 29.4 |
| Spleen | 3.9 |
| Lung | 21.6 |
| Liver | 2.4 |
| Kidney | 2.2 |
| Pancreas | 1.5 |
| Small intestine | 1.8 |
| Large intestine | 5.3 |
| Stomach | 3.4 |
| heart | 36.9 |
| ovary | 102.2 |
| cheek muscle | 18.4 |
Transcript
| Transcript ID | habu1_s2388_g08681.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08681.t1 ttcttctgctggtgccacacctcctcccctggaagcggtcgctttttcctcgtgctgttcgcgaaggctgcggaaatggc ctctggtaaagcatatattggaaaaccagttccagattttcgtgctacagcagtagtggatggcaacatcaaggatataa agttatcagactacagaggcaaatatgtggttctgttcttctacccactggattttacttttgtctgtcccactgagatc atagctttcagcgatcgagttgaggagtttcgcaagattaattgtgaggttattgctgcttctgtcgactctcagtttac ccatttggcttggacaaatacaggaagaaaggatggtggcttgggttcgacaaatatcccacttgtggcagacatcaacc acaacatttctaaggactatggtgtgctcaaggaagacgatggcattgcatacagaggtctgttcataatagatgataaa ggcatcctgagacagatcacagtgaatgacctacccgtgggacgttctgtggatgagacactgcgcctggttcaagcctt ccaattcacagatcagcatggtgaaggtgagtgatagatgaaatggacatagaaaaataaagcagtagtgctctggaaaa gatgatcaacttaagattggttcattgtgcctagtttctctttagggtgcaatgataggtctgagtgagacagtgaggat tgtgtagtagttttcaaacaatttagcagaaagataaatttggctttaccttaaatacagctttcttccccagtctaagc tcctgcaggtgaattagtcttcagtttttattatcccttagtcagcatggtcaacagccatgttatgggaaagctacaat gagacgttgtcttttagtaaagcagagatcagaagtcttcccagctgctgcatacattttgcaaaattaccaaatctcag tgttctcccatagattttgatgaagacttcagccatttttatatatttatgtgtggatgggtggaatgattttatttatt agatttatgtagcatccacctcacgtaggcggctctagatggctgaaaataaattaagtaaaatacatactgcaa |
|
Protein
| Protein ID | habu1_s2388_g08681.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08681.t1 MASGKAYIGKPVPDFRATAVVDGNIKDIKLSDYRGKYVVLFFYPLDFTFVCPTEIIAFSDRVEEFRKINCEVIAASVDSQ FTHLAWTNTGRKDGGLGSTNIPLVADINHNISKDYGVLKEDDGIAYRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQ AFQFTDQHGEGE |
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