Gene
Gene Model ID | habu1_s2388_g08684 |
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Locus | habu1_scaffold2388 : 474663 ... 515217 : - |
To GenomeBrowser | habu1_scaffold2388:474663..515217 |
Genes list of scaffold | habu1_scaffold2388 |
Annotation by Blast2GO
Annotation | GO |
---|---|
bestrophin-2 isoform x1 | GO:0005254 GO:0005929 GO:0007608 GO:0051899 GO:1902476 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
habu1_s2388_g08684.t2 | 1 | 1 | ArsA_ATPase | 38 | 329 | 0.0 | 403.3 | 0.0 | 0.0 | 402.2 |
habu1_s2388_g08684.t2 | 1 | 1 | CbiA | 40 | 279 | 5.9e-11 | 42.1 | 1.3e-13 | 1.7e-10 | 40.6 |
habu1_s2388_g08684.t2 | 1 | 1 | Bestrophin | 350 | 665 | 0.0 | 337.4 | 0.0 | 0.0 | 337.0 |
Expression profile
Libraries | FPKM |
---|---|
>Adult | |
Venom fang forming tissue | 2.4 |
Venom grand-1 | 1.4 |
Pit, infrared sensing | 2.7 |
Nose | 2.6 |
Brain-1 | 3.1 |
Eye | 4.3 |
fetal fibroblast | 5.1 |
venom gland-2 | 3.0 |
Brain-2 | 3.4 |
Spleen | 1.8 |
Lung | 2.3 |
Liver | 3.1 |
Kidney | 2.7 |
Pancreas | 1.3 |
Small intestine | 1.3 |
Large intestine | 2.0 |
Stomach | 1.6 |
heart | 3.1 |
ovary | 30.4 |
cheek muscle | 3.3 |
Transcript
Transcript ID | habu1_s2388_g08684.t1 |
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Definition | - |
>habu1_s2388_g08684.t1 ggttgttacaattagagcctcgctttaaaatggtgtagcctagcatcttgtcacgtgacttcgttccaagatggcagcgg tggcgtctgggctgtcggctgaagcggacgaattcgaggacgcgcctgatgtggagccactagagccgacgctgagcaac attatcgagcagcggagcctgaagtggattttcgtcggcgggaagggcggtgtgggcaaaacgacttgcagttgtagctt agctgtacagctctccaaagtacgtgagagtgtcctcatcatctctactgatcctgctcataacatctcagatgcctttg accagaaattttccaaggttcccaccaaagtacagggttatgataatctttttgccatggagattgatcctagcttgggt gtggctgagcttccagatgaattttttgaggaagataacatgctaagtatgggcaagaagatgatgcaagaggccatgag tgcctttcctggtatcgatgaagcaatgagttatgctgaagtgatgaggttggtgaaaggaatgaatttttccgtggtgg tgtttgacacagcgcccacaggacacacattacggctgctcaatttccccacaatagtggagcgggggctgggtcgactg atgcaaataaagaaccagatcagtcccttcatatcccagatgtgtaacatgcttggcctaggagacatgaatgctgacca gctggcttccaaactggaagaaacacttcctgtcatccgctctgtcagtgaacagttcaaagatccagaacaaaccactt tcatttgtgtttgcattgcggaattcctatcactgtatgaaacagaacggcttatccaagagttggccaaatgcaaaatt gatacccacaatatcatagtcaatcaattggtctttcctgaccctgacaagccttgcaagatgtgtgaggctcggcataa aatccagtctaaataccttgaccagatggaggacctttatgaagactttcatattgtaaagttgccacttttaccccatg aatataccgagtcactgagcttctttctgcctagcatgactgttacatatacagctcgggtggccaatgcccgctttggt ggcttctacaaactgctgagcctctggcgtgggagcatctataaactgctgtacaaggagttcctggtcttctcggtttc ctatttgggattaagcctgacgtatcggtatgtcttacaagaagatcagaaacgggtcttcgaaaaggtggtcatttatt gcaacaactatgctaatctcattcctgtctcctttgttttgggcttctatgtaacactggtagtaaaccgctggtggagc cagtataccagcatgccaatgccagatcgcttgatgtgtgccatttctggaaatgtgcatggtgcagatgagaggggacg gctttatcgacggacactcatgcgctattgcagtctgtcagcagtcttgatcttgcgctcagtcagcattgctgtgttca agcgctttcccaccatggaccatgtggtagaagcagggttcatgactcgtgaggaacgcaagaaatttgaaaatctcaac tcttcctacaatcgatactgggttccctgcatatggtttaccaacttagctgcacaggcacgtaaagaaggccgcatacg tgacaactgtgctctcaagttgctcatggaggaactgaatcactttcgtggcaactgcagcatgctttaccactatgact ggatcagtgtaccattagtatacactcaggtggttaccattgctgtatatagcttcttcttttcttgtctaattggaagg cagtttctcgatccagcccaaggttatgaaggacatgacctagacctgtggattcctgttttcaccctgcttcagttttt cttctactttggatggctcaaggtggctgagcaactcatcaacccttttggagaggatgacgacgactttgaaaccaatt tactgatcgacaggaacttccaggtctccatgatggctgtggatgagatgtatgcggatttgcctctcctggagaaggat agatattgggatgcctcaaacccacgtgccccctatacggcagctacagtttttctgctgcaacagccgtcattccaagg ctccacttttgatgtgacattggccaaggaggatatgcagttccagcctttggaggagattgccgagggctttgaagaca gccgccatgtgcctgcccacctcttgaaccgactgctctctactgctcctacctcaggaggttttggacgccgtctctct ctgctgaagcgcaagaacagctgtgtttcagaaccatcaaacacctacagctgcctttgtcaggacatgcaggcccttga ctgcacgtgtacccggcatgccagtcagcagatgcgcagtaacagcattcccttcatccctgaaggggcgggagactctg accacgataccagcagcccaggaaaggaagcatgcagtgttcttcctgagtcgcacattgttgagctgggtgaaccttct cagagtgcatcgggccaggagaatgttactgctgccccccctgatccagagccccttgtggatacatcagttaatacaaa tgtcttgtcctggcctctcctagaacatgactcttcagacacttctttctttcacaacccaaaggaggtgcccagcaaag gggtcggctatcccccatggctgcagagccccattgaagaggaaagtacggcatgacccagttattgggtatccacagct gagatggagttactgccggggacatcttgttatggtgatcttattggaagaaagccctgaaaggaagaaccaacagaagt gaatctacttttgtaaaaaccacctttgtggcaggagcttgggggaattttaagacaggggttgttgagacactcttaat ttcattaacaaatactctgttcccaccaaagaaaatgctagttttaaaccatgcttttaacttaatagactacgtacgaa cctagagtagatatgaatatcatactgctttgcagtgttggtgaaatctttctcgttctttttttctcctcaagataaaa ttgagaaggaaagagccaagaggtgtagatgaattctacggcacccttccccccccacacacacaaccctatatagtcaa ctgatttaaggcttatgtttttatgttttattaaatgtttgtttgtaaaacattgagacttttgaatactttaaatctta ccgcaattctttacaccttttaacaaagtcgtgggtaacttcattctgccaaacgtttgtcatttttaaatattattctg gcctctgggaagaacaggaagaatggcagagatgtattgtttgtattgttcatgccagagacactttcattaaataacct gcatacttaggtctctaccagcctttagaagatttacgtaagacttactgaaggaggcagggaaaactagactttaaagg gactcattataaacctctagtattcctagggcaatacaattgtcaatagatgcattattcaaatgtctaagaatattcat caggctcaggtgcttttcctattttcacagatttggcattgtttcttgaagagataaatgtttaattaaatatactttga tcatgcctaagctctagaatagcaaataaaataaaaaaatgattttaagaacacttg |
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Transcript ID | habu1_s2388_g08684.t2 |
Definition | - |
>habu1_s2388_g08684.t2 ggttgttacaattagagcctcgctttaaaatggtgtagcctagcatcttgtcacgtgacttcgttccaagatggcagcgg tggcgtctgggctgtcggctgaagcggacgaattcgaggacgcgcctgatgtggagccactagagccgacgctgagcaac attatcgagcagcggagcctgaagtggattttcgtcggcgggaagggcggtgtgggcaaaacgacttgcagttgtagctt agctgtacagctctccaaagtacgtgagagtgtcctcatcatctctactgatcctgctcataacatctcagatgcctttg accagaaattttccaaggttcccaccaaagtacagggttatgataatctttttgccatggagattgatcctagcttgggt gtggctgagcttccagatgaattttttgaggaagataacatgctaagtatgggcaagaagatgatgcaagaggccatgag tgcctttcctggtatcgatgaagcaatgagttatgctgaagtgatgaggttggtgaaaggaatgaatttttccgtggtgg tgtttgacacagcgcccacaggacacacattacggctgctcaatttccccacaatagtggagcgggggctgggtcgactg atgcaaataaagaaccagatcagtcccttcatatcccagatgtgtaacatgcttggcctaggagacatgaatgctgacca gctggcttccaaactggaagaaacacttcctgtcatccgctctgtcagtgaacagttcaaagatccagaacaaaccactt tcatttgtgtttgcattgcggaattcctatcactgtatgaaacagaacggcttatccaagagttggccaaatgcaaaatt gatacccacaatatcatagtcaatcaattggtctttcctgaccctgacaagccttgcaagatgtgtgaggctcggcataa aatccagtctaaataccttgaccagatggaggacctttatgaagactttcatattgtaaagttgccacttttaccccatg aagtaccctggctgaaagcaactgcaaaacagcaaaaaatcttttgcacagagtcactgagcttctttctgcctagcatg actgttacatatacagctcgggtggccaatgcccgctttggtggcttctacaaactgctgagcctctggcgtgggagcat ctataaactgctgtacaaggagttcctggtcttctcggtttcctatttgggattaagcctgacgtatcggtatgtcttac aagaagatcagaaacgggtcttcgaaaaggtggtcatttattgcaacaactatgctaatctcattcctgtctcctttgtt ttgggcttctatgtaacactggtagtaaaccgctggtggagccagtataccagcatgccaatgccagatcgcttgatgtg tgccatttctggaaatgtgcatggtgcagatgagaggggacggctttatcgacggacactcatgcgctattgcagtctgt cagcagtcttgatcttgcgctcagtcagcattgctgtgttcaagcgctttcccaccatggaccatgtggtagaagcaggg ttcatgactcgtgaggaacgcaagaaatttgaaaatctcaactcttcctacaatcgatactgggttccctgcatatggtt taccaacttagctgcacaggcacgtaaagaaggccgcatacgtgacaactgtgctctcaagttgctcatggaggaactga atcactttcgtggcaactgcagcatgctttaccactatgactggatcagtgtaccattagtatacactcaggtggttacc attgctgtatatagcttcttcttttcttgtctaattggaaggcagtttctcgatccagcccaaggttatgaaggacatga cctagacctgtggattcctgttttcaccctgcttcagtttttcttctactttggatggctcaaggtggctgagcaactca tcaacccttttggagaggatgacgacgactttgaaaccaatttactgatcgacaggaacttccaggtctccatgatggct gtggatgagatgtatgcggatttgcctctcctggagaaggatagatattgggatgcctcaaacccacgtgccccctatac ggcagctacagtttttctgctgcaacagccgtcattccaaggctccacttttgatgtgacattggccaaggaggatatgc agttccagcctttggaggagattgccgagggctttgaagacagccgccatgtgcctgcccacctcttgaaccgactgctc tctactgctcctacctcaggaggttttggacgccgtctctctctgctgaagcgcaagaacagctgtgtttcagaaccatc aaacacctacagctgcctttgtcaggacatgcaggcccttgactgcacgtgtacccggcatgccagtcagcagatgcgca gtaacagcattcccttcatccctgaaggggcgggagactctgaccacgataccagcagcccaggaaaggaagcatgcagt gttcttcctgagtcgcacattgttgagctgggtgaaccttctcagagtgcatcgggccaggagaatgttactgctgcccc ccctgatccagagccccttgtggatacatcagttaatacaaatgtcttgtcctggcctctcctagaacatgactcttcag acacttctttctttcacaacccaaaggaggtgcccagcaaaggggtcggctatcccccatggctgcagagccccattgaa gaggaaagtacggcatgacccagttattgggtatccacagctgagatggagttactgccggggacatcttgttatggtga tcttattggaagaaagccctgaaaggaagaaccaacagaagtgaatctacttttgtaaaaaccacctttgtggcaggagc ttgggggaattttaagacaggggttgttgagacactcttaatttcattaacaaatactctgttcccaccaaagaaaatgc tagttttaaaccatgcttttaacttaatagactacgtacgaacctagagtagatatgaatatcatactgctttgcagtgt tggtgaaatctttctcgttctttttttctcctcaagataaaattgagaaggaaagagccaagaggtgtagatgaattcta cggcacccttccccccccacacacacaaccctatatagtcaactgatttaaggcttatgtttttatgttttattaaatgt ttgtttgtaaaacattgagacttttgaatactttaaatcttaccgcaattctttacaccttttaacaaagtcgtgggtaa cttcattctgccaaacgtttgtcatttttaaatattattctggcctctgggaagaacaggaagaatggcagagatgtatt gtttgtattgttcatgccagagacactttcattaaataacctgcatacttaggtctctaccagcctttagaagatttacg taagacttactgaaggaggcagggaaaactagactttaaagggactcattataaacctctagtattcctagggcaataca attgtcaatagatgcattattcaaatgtctaagaatattcatcaggctcaggtgcttttcctattttcacagatttggca ttgtttcttgaagagataaatgtttaattaaatatactttgatcatgcctaagctctagaatagcaaataaaataaaaaa atgattttaagaacacttg |
Protein
Protein ID | habu1_s2388_g08684.t1 |
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Definition | - |
>habu1_s2388_g08684.t1 MAAVASGLSAEADEFEDAPDVEPLEPTLSNIIEQRSLKWIFVGGKGGVGKTTCSCSLAVQLSKVRESVLIISTDPAHNIS DAFDQKFSKVPTKVQGYDNLFAMEIDPSLGVAELPDEFFEEDNMLSMGKKMMQEAMSAFPGIDEAMSYAEVMRLVKGMNF SVVVFDTAPTGHTLRLLNFPTIVERGLGRLMQIKNQISPFISQMCNMLGLGDMNADQLASKLEETLPVIRSVSEQFKDPE QTTFICVCIAEFLSLYETERLIQELAKCKIDTHNIIVNQLVFPDPDKPCKMCEARHKIQSKYLDQMEDLYEDFHIVKLPL LPHEYTESLSFFLPSMTVTYTARVANARFGGFYKLLSLWRGSIYKLLYKEFLVFSVSYLGLSLTYRYVLQEDQKRVFEKV VIYCNNYANLIPVSFVLGFYVTLVVNRWWSQYTSMPMPDRLMCAISGNVHGADERGRLYRRTLMRYCSLSAVLILRSVSI AVFKRFPTMDHVVEAGFMTREERKKFENLNSSYNRYWVPCIWFTNLAAQARKEGRIRDNCALKLLMEELNHFRGNCSMLY HYDWISVPLVYTQVVTIAVYSFFFSCLIGRQFLDPAQGYEGHDLDLWIPVFTLLQFFFYFGWLKVAEQLINPFGEDDDDF ETNLLIDRNFQVSMMAVDEMYADLPLLEKDRYWDASNPRAPYTAATVFLLQQPSFQGSTFDVTLAKEDMQFQPLEEIAEG FEDSRHVPAHLLNRLLSTAPTSGGFGRRLSLLKRKNSCVSEPSNTYSCLCQDMQALDCTCTRHASQQMRSNSIPFIPEGA GDSDHDTSSPGKEACSVLPESHIVELGEPSQSASGQENVTAAPPDPEPLVDTSVNTNVLSWPLLEHDSSDTSFFHNPKEV PSKGVGYPPWLQSPIEEESTA |
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Protein ID | habu1_s2388_g08684.t2 |
Definition | - |
>habu1_s2388_g08684.t2 MAAVASGLSAEADEFEDAPDVEPLEPTLSNIIEQRSLKWIFVGGKGGVGKTTCSCSLAVQLSKVRESVLIISTDPAHNIS DAFDQKFSKVPTKVQGYDNLFAMEIDPSLGVAELPDEFFEEDNMLSMGKKMMQEAMSAFPGIDEAMSYAEVMRLVKGMNF SVVVFDTAPTGHTLRLLNFPTIVERGLGRLMQIKNQISPFISQMCNMLGLGDMNADQLASKLEETLPVIRSVSEQFKDPE QTTFICVCIAEFLSLYETERLIQELAKCKIDTHNIIVNQLVFPDPDKPCKMCEARHKIQSKYLDQMEDLYEDFHIVKLPL LPHEVPWLKATAKQQKIFCTESLSFFLPSMTVTYTARVANARFGGFYKLLSLWRGSIYKLLYKEFLVFSVSYLGLSLTYR YVLQEDQKRVFEKVVIYCNNYANLIPVSFVLGFYVTLVVNRWWSQYTSMPMPDRLMCAISGNVHGADERGRLYRRTLMRY CSLSAVLILRSVSIAVFKRFPTMDHVVEAGFMTREERKKFENLNSSYNRYWVPCIWFTNLAAQARKEGRIRDNCALKLLM EELNHFRGNCSMLYHYDWISVPLVYTQVVTIAVYSFFFSCLIGRQFLDPAQGYEGHDLDLWIPVFTLLQFFFYFGWLKVA EQLINPFGEDDDDFETNLLIDRNFQVSMMAVDEMYADLPLLEKDRYWDASNPRAPYTAATVFLLQQPSFQGSTFDVTLAK EDMQFQPLEEIAEGFEDSRHVPAHLLNRLLSTAPTSGGFGRRLSLLKRKNSCVSEPSNTYSCLCQDMQALDCTCTRHASQ QMRSNSIPFIPEGAGDSDHDTSSPGKEACSVLPESHIVELGEPSQSASGQENVTAAPPDPEPLVDTSVNTNVLSWPLLEH DSSDTSFFHNPKEVPSKGVGYPPWLQSPIEEESTA |