Gene
| Gene Model ID | habu1_s2388_g08688 |
|---|---|
| Locus | habu1_scaffold2388 : 575308 ... 592551 : + |
| To GenomeBrowser | habu1_scaffold2388:575308..592551 |
| Genes list of scaffold | habu1_scaffold2388 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2388_g08688.t1 | 3 | 1 | WD40 | 176 | 207 | 2.2e-22 | 78.0 | 1.2e-08 | 4.4e-05 | 23.1 |
| habu1_s2388_g08688.t1 | 3 | 2 | WD40 | 229 | 258 | 2.2e-22 | 78.0 | 1.6e-08 | 5.8e-05 | 22.8 |
| habu1_s2388_g08688.t1 | 3 | 3 | WD40 | 273 | 298 | 2.2e-22 | 78.0 | 3.0e-06 | 0.011 | 15.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2388_g08688.t1 | gi|602628175|ref|XP_007421025.1| | PREDICTED: F-box/WD repeat-containing protein 9 [Python bivittatus] | 0.0 |
| habu1_s2388_g08688.t1 | gi|641796278|ref|XP_008161528.1| | PREDICTED: F-box/WD repeat-containing protein 9 isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s2388_g08688.t1 | gi|591366854|ref|XP_007058280.1| | PREDICTED: F-box/WD repeat-containing protein 9 [Chelonia mydas] | 0.0 |
| habu1_s2388_g08688.t1 | gi|637336693|ref|XP_008115690.1| | PREDICTED: F-box/WD repeat-containing protein 9 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s2388_g08688.t1 | gi|637336684|ref|XP_008115688.1| | PREDICTED: F-box/WD repeat-containing protein 9 isoform X1 [Anolis carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.7 |
| Venom grand-1 | 2.0 |
| Pit, infrared sensing | 2.7 |
| Nose | 3.2 |
| Brain-1 | 3.9 |
| Eye | 2.9 |
| fetal fibroblast | 5.0 |
| venom gland-2 | 2.9 |
| Brain-2 | 3.7 |
| Spleen | 2.5 |
| Lung | 1.8 |
| Liver | 1.8 |
| Kidney | 1.2 |
| Pancreas | 0.7 |
| Small intestine | 1.7 |
| Large intestine | 1.8 |
| Stomach | 2.4 |
| heart | 1.9 |
| ovary | 5.7 |
| cheek muscle | 1.3 |
Transcript
| Transcript ID | habu1_s2388_g08688.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08688.t1 aaagctgccttaaatcgatggtgttggttcttccgttccgacgaagcggcggaggcaggttgccgggaggattaggatcc tagctcgctgctgtgaccaagggagcgggaagcaggactcggcgttgggattaatctcttactgtgtggagctccgcatc tacagaacggagatcttcctccggcttccagcagcgctaaggcgggcgtgaccgctgaacggaggaattgtattcggcag cagagctgaatttttcacttgctgcacttcccggacagcaatggaaactgcctcagattcttctgttgaacaaccagcct ctgacaatgattctgacacagagagcagaatagatccagatacccaggccctggagtatgttgagcgtgttcttggaact tcaagtcaatccaggcaagcaatccagtgtctacctccagagtctctctcaataggtggtagagtccgaacatcagacct cagatcacctctagaactgaaaaaatctgttgctgaagaaactgcttcagggctgttgtctcttcctctagagttgattt tagaaatctgttcttacctgcaagccaggtttgttttgcacgtccttcctttagtctgcaagactctgagagacattgtg caagatgaagtcacttggagaattcgacttttaaaaagaattggcaattgctatccagttgtagaaggtaatgattttaa ctggccaacagcttgcattgaactagaggaacacctccaacaatgggcagagagtggcaaaaacgcagagtatttttccc ttactgaagggcactttgctcctgttgattctgtactgctccttcagggtggggagctgtgtatttctggctctcgagac cgaaatgtcaacttgtgggatctaaggcagctgggcaaagcaccagaaaaagttctagtgaaagtgctggggacagagca caatggaacacacaaggggtgggtttggtccctggcttcacgtgataaccatgtatgttcaggctcctgggacagcacag tgaagttatgggatatagccgctgatggaaaacagtttggagaaatcagtgagaaagcagctgtattgtgcctttcttat ttgcctgacattttggccacaggaacttacgacaagaaagtgtcagtctatgatccacgagctgcttatgccccagtgat gagccgcaggcttcactccaatgcagtcctatcccttgtagctgacgaacacttcattatctctggcagtgaggatcgaa cgctggtatgttttgacaggcggaccaatagtgtgcttcaaaggcttcagctggacacatacttattttccatgtcgtac cagggttctcaactatgggctggagacaatcgtggaatgttgtatgtctttgagaacaatggagggcgtttcaagcacat tcggtattttgatgtcggtcatcgctctcagatcactggagtccaacactcattgggtgcactgtatacaacttccactg acaagacgttccgtatacatattcctacagatccaccaaaggtcatctgctcacagacccatagctatgtgctaaatggg atcactgttgaaggaaatatggcagtagctgcctcaggtggtttgtccttggaggtttggaaactcagtgtttgatgaca agtcacagtgatccatgctcagaagttcaggatcatcaagtacagtgtattggacaattatttcttcataggttccaggg tcctgatgtctgctgaattgttgttgttgtttttaatatgttctttggggttgaatactcaaatgttgaagcttcagctt tgcttctcccagtagggataacacagaggtttgtatggaggccatttgattcacatttgaaccttaaccttaacctcacc ctttcttgctggccatttctctcatttcaccttgtatggctgaaacaaggtgaaaggcgtgtactctttccatcatctag ctagccccttcgagatctgccccactcaacatataggagcagtgtcttctctttggcttgatggctaagaactcattggt ttaccaggtaaataagcacaggactaagcatgaaagggtgaattatgggcagaggagagagtgatggttagagagactac ccagctaacttggcctgatgaatgtttacatttaattcaaaatattcagccataatggcagatcaagagttacgttgcct ttttctcccttgtggtaagcaaagtatgtcttaaagcatgatttttttaagggatttggtttagaattaagaaatggaac ccactaagtaagattatatagcaaattttgactgtacaaccattttttcaattttgtcattattaaattataaccaaaac aagttttgaacaagatgaactgtttttttcaatgacatggcaagcttcatatattgtgctcagccatacagtatggtttg gttggttttgttttaatattatgtatgaaccatatcacagtattttataaagcatggtttgtagtctagcattattgaat tagctttgaggcttattcagtatatcatgattaaagtaaaccatgggttagcataatgtgaaaatccagaatatagaggg gtgcaacacaaaatgtcaattgttgtattttcatttatgttatatttatttgtcagtcctttgtcattttataagcaaga atctaaggactggttaaatttgagtgcatttggatatatgtacataaacttgcttttgaattatccaacaaaggcaaatt gataagttaaaatctttccctcttattcttattatctttgagaattagaaatgttactaactctgagctggacagtatca ttcttttccttctatgtaatagggttattataaatactctagaaggaatagcaggaataattggagtaacaaatataaaa tacaaaacaataatatataattccataataaaacattttgacttcttatgagcatcttagacacatcagtttctactttt ttcatcaaaattcagtaatttcagtacttaatttccagtttgttgattttttgaagcaggagttgatattagaatgtata gtcagaaaacaattcaaaaggcttattccttcagtaatatatgatctgtattatttataaggctgaagctggagttatta ttgagtaagcagattgaaaagcacactatatgaatctcaccttccacaagaaccacctggaattggtgtggtaataataa atatccccctcccctcatatacacaatatcagtttggagtcaggcaacacaaaaaatgaaccaaataataaaaataagaa agagaccagattttgctctagaaagcaacccacagactcctttaatagtttatgacatttaaccaattattgacttctga gtgaggaatggtaaattatcacatctccatgtgtagacaatgactgtagcaaagactaaaggactgacaagtaggcctgt cccaagaaacgtctctggataaggagaagacagaaagtcacccacttttgctccaaactgtagctccttgtgaggacact gcaggacagtggtttcctaccagtttgagaactgggagagaaagggaatcatcatactctcagttgcagtaaagactttt aaagggcactaagttcactaatcttacttccattcacttttggaaatcacccatttaattatattaagaatattcgagat cttcaaaacaagtttgaaaagccacttggtgagtttacctttgtttttgaacaaaagaaaaattaactgtaagcttaaga aatagaaacaaatggcaaaatctaaataagaatttgagaaagatgtaaatgctaaaatcacgtctgatttactttgacca caccacgcatgcaaattcactggagaagatgatgctaggaatggttagtggaacaaaaagggcaggcaaagaacaccctg gcttgataacatcaaatctgatacaaagtcgaacatccagcaattgaaagaagctttgcttgacaggatagcatggagag cacttgcttataaagttgccaagagtgagacacaactaaatggttaaaacaacaacaaatgccaaaaagggcaagaaaca tttaggacttttgctaaaagattttggggaaattaaattaataaataataccttcatgggaatactattttatttagtct atccaaataacagagatataagtctttttatgatttcagaaattacacactagaagggattaaagactcgtcacgaaggg aaaaagaattggagagtaagtattggattagagaaaatgacagataatgctgtgaaatgtgaatcatttcaagatacttg aaaaatggggactgttgtagctgcaatgtcagaaatgtttgcttatatgaatatataatttagaaaagaataaaggaaag atgcaacgaaaaagct |
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Protein
| Protein ID | habu1_s2388_g08688.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08688.t1 METASDSSVEQPASDNDSDTESRIDPDTQALEYVERVLGTSSQSRQAIQCLPPESLSIGGRVRTSDLRSPLELKKSVAEE TASGLLSLPLELILEICSYLQARFVLHVLPLVCKTLRDIVQDEVTWRIRLLKRIGNCYPVVEGNDFNWPTACIELEEHLQ QWAESGKNAEYFSLTEGHFAPVDSVLLLQGGELCISGSRDRNVNLWDLRQLGKAPEKVLVKVLGTEHNGTHKGWVWSLAS RDNHVCSGSWDSTVKLWDIAADGKQFGEISEKAAVLCLSYLPDILATGTYDKKVSVYDPRAAYAPVMSRRLHSNAVLSLV ADEHFIISGSEDRTLVCFDRRTNSVLQRLQLDTYLFSMSYQGSQLWAGDNRGMLYVFENNGGRFKHIRYFDVGHRSQITG VQHSLGALYTTSTDKTFRIHIPTDPPKVICSQTHSYVLNGITVEGNMAVAASGGLSLEVWKLSV |
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