Gene
| Gene Model ID | habu1_s2388_g08690 |
|---|---|
| Locus | habu1_scaffold2388 : 609668 ... 619295 : + |
| To GenomeBrowser | habu1_scaffold2388:609668..619295 |
| Genes list of scaffold | habu1_scaffold2388 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2388_g08690.t1 | 1 | 1 | UPF0139 | 4 | 105 | 0.0 | 179.7 | 0.0 | 0.0 | 179.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2388_g08690.t1 | gi|602628173|ref|XP_007421024.1| | PREDICTED: protein Asterix [Python bivittatus] | 0.0 |
| habu1_s2388_g08690.t1 | gi|530648250|ref|XP_005310698.1| | PREDICTED: protein Asterix [Chrysemys picta bellii] | 0.0 |
| habu1_s2388_g08690.t1 | gi|327281010|ref|XP_003225243.1| | PREDICTED: protein Asterix [Anolis carolinensis] | 0.0 |
| habu1_s2388_g08690.t1 | gi|734640480|ref|XP_010749082.1| | PREDICTED: protein Asterix [Larimichthys crocea] | 0.0 |
| habu1_s2388_g08690.t1 | gi|149636846|ref|XP_001509307.1| | PREDICTED: protein Asterix [Ornithorhynchus anatinus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 40.1 |
| Venom grand-1 | 79.3 |
| Pit, infrared sensing | 63.9 |
| Nose | 60.6 |
| Brain-1 | 23.3 |
| Eye | 41.7 |
| fetal fibroblast | 79.1 |
| venom gland-2 | 138.9 |
| Brain-2 | 31.9 |
| Spleen | 43.8 |
| Lung | 26.4 |
| Liver | 92.4 |
| Kidney | 64.6 |
| Pancreas | 125.4 |
| Small intestine | 46.8 |
| Large intestine | 45.7 |
| Stomach | 75.1 |
| heart | 136.6 |
| ovary | 79.3 |
| cheek muscle | 89.6 |
Transcript
| Transcript ID | habu1_s2388_g08690.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08690.t1 gctgtcagtacagcactgtagcccgcggcccggtgggatggctagcaacagtatggcagatccgcggcgtcccaaccgca ttctcagatacaagcctccaactacagaaaacaaccctactttggaagatcctacaccagattatatgaatttgctagga atgattttcagcatgtgtggcttaatgctaaaattaaagtggtgtgcttggattgctgtctactgctcatttatcagttt tgccaactctaggagttcagaagacaccaaacagatgatgagcagtttcatgttgtctatttctgctgtagtgatgtcct atcttcaaaatcctcagcccatgtctcctccttggtgaaaagataacacttttctttaaaattcaccttcccaaatagat gggttatcctgttcagagtggaacattttcttatacagcataaatttaattgtacaggtataccattgcaacatattggg aatatttactttgctatatcaataaagtaattattgttaaatatgcat |
|
Protein
| Protein ID | habu1_s2388_g08690.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08690.t1 MASNSMADPRRPNRILRYKPPTTENNPTLEDPTPDYMNLLGMIFSMCGLMLKLKWCAWIAVYCSFISFANSRSSEDTKQM MSSFMLSISAVVMSYLQNPQPMSPPW |
|