Gene
| Gene Model ID | habu1_s2388_g08692 |
|---|---|
| Locus | habu1_scaffold2388 : 638698 ... 649667 : + |
| To GenomeBrowser | habu1_scaffold2388:638698..649667 |
| Genes list of scaffold | habu1_scaffold2388 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| syntaxin-10 isoform x1 | GO:0016192 GO:0044444 GO:1902582 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2388_g08692.t1 | 1 | 1 | Syntaxin-6_N | 5 | 103 | 5.3e-31 | 106.8 | 3.6e-34 | 5.3e-31 | 106.8 |
| habu1_s2388_g08692.t1 | 1 | 1 | SNARE | 158 | 218 | 2.3e-11 | 43.1 | 1.6e-14 | 2.3e-11 | 43.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2388_g08692.t1 | gi|602628169|ref|XP_007421022.1| | PREDICTED: syntaxin-10 [Python bivittatus] | 0.0 |
| habu1_s2388_g08692.t1 | gi|637336657|ref|XP_008115683.1| | PREDICTED: syntaxin-10 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s2388_g08692.t1 | gi|556972308|ref|XP_005994381.1| | PREDICTED: syntaxin-10 isoform X1 [Latimeria chalumnae] | 0.0 |
| habu1_s2388_g08692.t1 | gi|478536997|ref|XP_004442615.1| | PREDICTED: syntaxin-10 isoform 1 [Ceratotherium simum simum] | 0.0 |
| habu1_s2388_g08692.t1 | gi|350580452|ref|XP_003480825.1| | PREDICTED: syntaxin-10 isoform X1 [Sus scrofa] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 9.3 |
| Venom grand-1 | 13.1 |
| Pit, infrared sensing | 9.8 |
| Nose | 10.6 |
| Brain-1 | 2.0 |
| Eye | 6.4 |
| fetal fibroblast | 9.1 |
| venom gland-2 | 9.3 |
| Brain-2 | 2.1 |
| Spleen | 8.5 |
| Lung | 11.0 |
| Liver | 13.3 |
| Kidney | 7.5 |
| Pancreas | 10.2 |
| Small intestine | 8.7 |
| Large intestine | 9.5 |
| Stomach | 10.0 |
| heart | 8.5 |
| ovary | 10.4 |
| cheek muscle | 18.1 |
Transcript
| Transcript ID | habu1_s2388_g08692.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08692.t1 gacttctgaaggcgacttgaagggtcaaggatgtctctgcaggacccgttcttcgcggtgaaaggagaagttcagaaagc agtgaatacagcacggggcctttatcaacgccggggccagctgctccaggagacccaagttgtgaacaaggaagagctga actggactacaaatgaattacgcaacaccttgcgaagcattgagtgggacttggaggatttggaagaaaccatttgcatt gtggaatcaaacccacacaagtttgccattgcgccgtctgaggttgcagcgcgacgttcttttgtcacagagatgcggga gtcggttaaggaaatgcaggatcatatgtctgacccagcagcccagtcctttatggagagaaacaacatggagctggcgg atggcagggaccgctgtgtgctgttgagtgcagagaaggtgtcagcagctgattcacatgttttagaagagcagcagttg caccagaagttgatcattgaggaacaggatgaacagttggagctggtctctggcagcatttctgtactgaagcacatgtc ggggcgggttggagaggaacttgatgaacaaactataatgctagaagactttgctcacgagatggacagcactcagagcg gcatagatggggtgctcaaaaagatgggcagagtctcccacatgacccgtggaagacgtcagtggtgcatcatctgccta ttagtcatcactggtgtggtgatattgatccttctttttgctctgtggccaactgacagatgaacatagggaaaatggaa acgataccaccaaccccattcctttcatgcggaaagcctgaagccaccatggctttatgtcctgtaaggggcgagggcta gtgaagacatgggacaatgacaagaatgttggattctaactgggcttccctcccttgcattcatactgttagttattagg agctacaggtttgcgacaagggaggattctgcttgttggtacttatcaaccccatcaaggtagtccaaactaggaaacca aaatggtgaatgctaatactatttttattctaaaattaccgtatattaatagactcttgcaagtctgaaagcacttccca cccattccctgccttcactttccagagaactagggagggataatcctgaagccttctcaaattatacttctgttttgggc tcagatttcatttatcagaccattgtctaaactgcagctcttctcacaaagctattctcacagcccattcctgtacttta gaatgggaacttgtgtagtgtctttttcctgccatacttgggaaataattggatttgaatacccgtgtttcttaaatgtg atcgtgctgtacccgctacgggtcacgaacttagaaaaaaataagcaaaagtgtttattttctgttttagtcttaaaaga tccaattccttcataccaactctgaatctgtgtaacttatctctgcatgaaacgtatctgatgaagcacaattgacttat acggttacctattttccagttgaaccaatcaagaatggtggaagaattaagatagggtaacagtatgtcctgcttgttga gttggtgaaattactaagggttgaagatgatctaaagctatatttttatttaaatgcttaatgaaaccaaacaccagccc tcaatcccccatccctgttagctgttttctaaaaattgggagacaaaaaacatttgccattatgtaaatgtagtctacag cactgtgcatcgagatgtaacttatggtgatacttctgggctaggacaaaaaaatctgacttacaaatgtacctgctctc ttttcatcttaagcctagtaaaacatggtggacagagcatcttaacattggcgaagtggattttgccctgaaaataaaaa actggctattttcagggaagtcccagtgactcagtttactgtgagcaatgtctctatttacagacacgcggctattcctt atatatataaaatattatagagcagagattggcagacttaacttgtaagatctactttatcttaaaaaaaatgaggttta caaatcagcttggtgcaaagaatgctgaaccttggaatttagaaagacacttacagggctattgtagggagaaaagctgt ttctggttaggtcaagctttatgtgggtgaggggaaagttttggctgctgctattctgaattcttgtgctgctgaaaata tccaaataattggatctgtcttctgcctatccccttttagaagacaatgttaaaaaacaacttttttaaaaaaataaata ttttatacttgtatgtaaagcgcctgttttggactatgttattgatgtgggaaggaattggcaggatccctacacctcta agagaatgaacattgtttggctttgtctgatataatcagtttcacattgtcttcagctttatctacagatgctggataca aaggtggtaagaaaatgttgacgaaaacacagctgactatggagacttgatttaaccatcatagccaatatctgtagatc ctctgacgctttattgtaagctaatgttaatatcatatgcctcaagtctccactgcttttttactgtaagccacctagag gttcagctattgagtgctttaacatttttaataaataaatattttgcttagtagctactct |
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Protein
| Protein ID | habu1_s2388_g08692.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08692.t1 MSLQDPFFAVKGEVQKAVNTARGLYQRRGQLLQETQVVNKEELNWTTNELRNTLRSIEWDLEDLEETICIVESNPHKFAI APSEVAARRSFVTEMRESVKEMQDHMSDPAAQSFMERNNMELADGRDRCVLLSAEKVSAADSHVLEEQQLHQKLIIEEQD EQLELVSGSISVLKHMSGRVGEELDEQTIMLEDFAHEMDSTQSGIDGVLKKMGRVSHMTRGRRQWCIICLLVITGVVILI LLFALWPTDR |
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