Gene
| Gene Model ID | habu1_s2388_g08705 |
|---|---|
| Locus | habu1_scaffold2388 : 1313194 ... 1348152 : + |
| To GenomeBrowser | habu1_scaffold2388:1313194..1348152 |
| Genes list of scaffold | habu1_scaffold2388 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein cyr61-like | GO:0001558 GO:0005520 GO:0016942 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2388_g08705.t1 | 1 | 1 | IGFBP | 67 | 119 | 2.1e-12 | 47.3 | 8.5e-16 | 2.1e-12 | 47.3 |
| habu1_s2388_g08705.t1 | 1 | 1 | VWC | 141 | 204 | 6.1e-11 | 42.2 | 2.5e-14 | 6.1e-11 | 42.2 |
| habu1_s2388_g08705.t1 | 1 | 1 | TSP_1 | 261 | 302 | 1.9e-08 | 34.2 | 7.6e-12 | 1.9e-08 | 34.2 |
| habu1_s2388_g08705.t1 | 1 | 1 | Cys_knot | 315 | 396 | 1.9e-09 | 37.5 | 7.6e-13 | 1.9e-09 | 37.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2388_g08705.t1 | gi|602662024|ref|XP_007436658.1| | PREDICTED: protein CYR61-like [Python bivittatus] | 0.0 |
| habu1_s2388_g08705.t1 | gi|327265166|ref|XP_003217379.1| | PREDICTED: protein CYR61-like [Anolis carolinensis] | 0.0 |
| habu1_s2388_g08705.t1 | gi|591349536|ref|XP_007069312.1| | PREDICTED: protein CYR61-like [Chelonia mydas] | 0.0 |
| habu1_s2388_g08705.t1 | gi|530608900|ref|XP_005296102.1| | PREDICTED: protein CYR61-like isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s2388_g08705.t1 | gi|558203570|ref|XP_006132082.1| | PREDICTED: protein CYR61-like [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.4 |
| Venom grand-1 | 1.5 |
| Pit, infrared sensing | 2.2 |
| Nose | 0.3 |
| Brain-1 | 0.4 |
| Eye | 1.8 |
| fetal fibroblast | 0.7 |
| venom gland-2 | 0.4 |
| Brain-2 | 0.6 |
| Spleen | 0.1 |
| Lung | 0.0 |
| Liver | 0.1 |
| Kidney | 0.5 |
| Pancreas | 0.2 |
| Small intestine | 0.2 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.1 |
| ovary | 1.9 |
| cheek muscle | 10.2 |
Transcript
| Transcript ID | habu1_s2388_g08705.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08705.t1 gggaaccaccctagggaagtgcctctccagcccggcccaggctggaactcttttcctgggcacttggtggcagaggagca gctgaaggagggtggtggcgtcctctgccttgtgcaccaagcaaggggccgaaaagcagggagggtgttgaaagtgatgc aagagttggagaacaaattcctaaagaagtgttgacgtcagagggtgggacttcagggagagtcttcatggaaggtattt cctacctcctggcactacccgtcccctccagccagataataaggaagaaaaatatttctgaaacaatgattcaatgggca acagtcgccctcttcctggccgccttttctcatcaaacaggaatgagaccggctgccctgaccctccttgctttcctgct gtgtttctctctggtcgccggccgctgcccattcccatgccgctgcgcaagacgtccccttcgctgccctcccggcgtca gctcggttttcgacggctgtggctgctgccaagtgtgcgcccgccagctcaacgaggactgtgacaagctgtcgccctgc gatcctcacaaaggcctggagtgcaattttggggccgatcctttagcgaaccggggcatctgttgggcaaagcaagaagg tcggacctgcgaatacaatggccgtatttaccaaaacggagagaactttcagcctagttgcaaacatcaatgcacgtgca ttgatggagcggtgggttgccaacctctttgcccactggaactgcctctgacttcactaggctgtcccaatccccggctc attaaactgcctggtcaatgctgcaagaaatttgtgtgcagcaaaggatccaagaagtatgaaggtatcacttttgagta caactcaaaaggagaggccagtagcaatgaaatcatctatgtgggcaaaggcggacactggaaaaacctgccaggatgga gaccattcttccaggatcaggatacaaagcaagagcacaaatgcttgtcccagaccacacgctggtccccgtgctctaag agttgcggttttggcatctctacccgcatcaacagcaataatccccaatgcaagctgatcaaagaaacccgattgtgtca ggtcaggccctgtgagcagcctgatttttcaaagctaaagaaaggcaagaaatgtctgaggacacacaaagtgcaagagc cagtgcgattcagtcatgctggttgcaagagcccacgccgttaccagccaagcttctgtggggcctgcctggatggccgc tgctgtgtacccctacgtactcgtacgctaaatgtacccttccgttgtcctgatgggagcacttttaccaagaaggtcat gatgatccatacttgccagtgtggagcaactcactgcccgccgctgagtgaaactgccatgggcccccagtatcagctga acggggacattcacaaattcctggaatgataagagcatgcccacctctctcctggtggctctgacggagttcccaaatga ctttggatcatccaggccccctgcttgatccatgaagctaagacatgctgtagttgctctgcttccctgaatgcaaatct ggaagacaaaatggcacttggaaatggcctaacccttcggtgtttggagaacgcattgggataccttggaaatacggatg tccagttactgggaatggattgaatggcactgattttagtctctctgtttagtccagccagactcaggctggaactgagt ctcatgctattagtagaagatcaaagacttctgatttttgtttttgggtttttttttggatttcatggccttcatgctgg aaaggttgaggaagcacagcattatgcactatcggtagctgggcgggggggggagggctgttgttcagattgctaaatcc caaagtgggcagttttgacattttcaaggtcccagaatttgagaaaacatagtacattttaagttggataaaaatcaact atagtggaataact |
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Protein
| Protein ID | habu1_s2388_g08705.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08705.t1 MEGISYLLALPVPSSQIIRKKNISETMIQWATVALFLAAFSHQTGMRPAALTLLAFLLCFSLVAGRCPFPCRCARRPLRC PPGVSSVFDGCGCCQVCARQLNEDCDKLSPCDPHKGLECNFGADPLANRGICWAKQEGRTCEYNGRIYQNGENFQPSCKH QCTCIDGAVGCQPLCPLELPLTSLGCPNPRLIKLPGQCCKKFVCSKGSKKYEGITFEYNSKGEASSNEIIYVGKGGHWKN LPGWRPFFQDQDTKQEHKCLSQTTRWSPCSKSCGFGISTRINSNNPQCKLIKETRLCQVRPCEQPDFSKLKKGKKCLRTH KVQEPVRFSHAGCKSPRRYQPSFCGACLDGRCCVPLRTRTLNVPFRCPDGSTFTKKVMMIHTCQCGATHCPPLSETAMGP QYQLNGDIHKFLE |
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