Gene
| Gene Model ID | habu1_s2388_g08707 |
|---|---|
| Locus | habu1_scaffold2388 : 1377496 ... 1384303 : - |
| To GenomeBrowser | habu1_scaffold2388:1377496..1384303 |
| Genes list of scaffold | habu1_scaffold2388 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| camp-dependent protein kinase catalytic subunit partial | EC:2.7.11.0 GO:0004674 GO:0005524 GO:0006468 GO:0009069 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2388_g08707.t1 | 1 | 1 | SAM_1 | 250 | 306 | 2.2e-08 | 34.1 | 9.9e-12 | 3.7e-08 | 33.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2388_g08707.t1 | gi|602662028|ref|XP_007436660.1| | PREDICTED: atherin-like [Python bivittatus] | 0.0 |
| habu1_s2388_g08707.t1 | gi|637268499|ref|XP_008102821.1| | PREDICTED: atherin-like [Anolis carolinensis] | 0.0 |
| habu1_s2388_g08707.t1 | gi|543380797|ref|XP_005533593.1| | PREDICTED: atherin-like [Pseudopodoces humilis] | 0.0 |
| habu1_s2388_g08707.t1 | gi|591349540|ref|XP_007069314.1| | PREDICTED: atherin-like [Chelonia mydas] | 0.0 |
| habu1_s2388_g08707.t1 | gi|558203566|ref|XP_006132081.1| | PREDICTED: atherin [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.3 |
| Venom grand-1 | 5.3 |
| Pit, infrared sensing | 4.7 |
| Nose | 3.2 |
| Brain-1 | 4.2 |
| Eye | 3.3 |
| fetal fibroblast | 13.3 |
| venom gland-2 | 5.1 |
| Brain-2 | 6.2 |
| Spleen | 3.3 |
| Lung | 3.2 |
| Liver | 6.6 |
| Kidney | 9.8 |
| Pancreas | 3.1 |
| Small intestine | 4.1 |
| Large intestine | 2.3 |
| Stomach | 6.2 |
| heart | 1.3 |
| ovary | 61.6 |
| cheek muscle | 9.9 |
Transcript
| Transcript ID | habu1_s2388_g08707.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08707.t1 cgggggcagcaaagccccgggggaggcggcaacaccatggccggccccccgccgccgcccccgggccaggaggcgccccg ctaccaagagtggatcttagacaccatcgactcgctgcgctctcgcaaggcgcgcccggacctggagcgcatctgccgca tggtgcgccggcggcacggcccggagccggagcgcacccgcgccgagctggaaaagctcatccagcaacgcgccgtgctc cgagtcagctacaagggaagcatctcgtaccgcaacgctgcgcggaaggcaggggaggagatcaaaggcgaagaagacga ggacgaagaggaagaagaggatgaagtctccactatgtctgaaggctcagaagtggcacaagattttgagatcagcaact acagcagacctgggacaggccaggtgaatggtgactgtaaggacagcaagcacggtgggaaagagatcccacctagcagt gccacccccagagacctgcactccctagaggaaacatctttgaacaaaggattggagcattctcagcatgaaggaaatga gcaatgtcacacaaaggcctcttggcctggagaaagtgcctgtcaccatctgggaggcagcaagaaagatggcagcgcct atcagcagccagacagagcagtgtcaccagctgttgcaggggctgatccctctgtgccctcatctcctgggagacctggc atccaggcagatgggagaccattcagttgcgtttcggtgaaagagaagccttctgaccctgtggaatggactgtcggtga cgttgtggattatttcacagaagctgggtttgctgagcaagcttcggcctttcaggagcaggagattgatgggaaatctc tgctgctgatgcagcgcactgatgtgcttactggcctctctattcgcctgggaccggccctcaagatctacgagtatcac atcaaggtcctccagcagtgccactttgaagaagacgagggcgactccttcatgggctgagaacggggccacgctagtag ccttttcttccaattttcatggttgttgcccagagtcaattgctttttattatttttttttcttccccattttttaaaaa tataaatatttaaactgaaaaaaatgat |
|
Protein
| Protein ID | habu1_s2388_g08707.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08707.t1 MAGPPPPPPGQEAPRYQEWILDTIDSLRSRKARPDLERICRMVRRRHGPEPERTRAELEKLIQQRAVLRVSYKGSISYRN AARKAGEEIKGEEDEDEEEEEDEVSTMSEGSEVAQDFEISNYSRPGTGQVNGDCKDSKHGGKEIPPSSATPRDLHSLEET SLNKGLEHSQHEGNEQCHTKASWPGESACHHLGGSKKDGSAYQQPDRAVSPAVAGADPSVPSSPGRPGIQADGRPFSCVS VKEKPSDPVEWTVGDVVDYFTEAGFAEQASAFQEQEIDGKSLLLMQRTDVLTGLSIRLGPALKIYEYHIKVLQQCHFEED EGDSFMG |
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