Gene
| Gene Model ID | habu1_s2388_g08708 |
|---|---|
| Locus | habu1_scaffold2388 : 1390563 ... 1466583 : - |
| To GenomeBrowser | habu1_scaffold2388:1390563..1466583 |
| Genes list of scaffold | habu1_scaffold2388 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| camp-dependent protein kinase catalytic subunit alpha isoform x3 | EC:2.7.11.0 GO:0004674 GO:0005524 GO:0006468 GO:0009069 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2388_g08708.t4 | 1 | 1 | Pkinase | 73 | 325 | 0.0 | 233.4 | 0.0 | 0.0 | 233.1 |
| habu1_s2388_g08708.t4 | 1 | 1 | Pkinase_Tyr | 74 | 308 | 1.6e-33 | 115.8 | 6.0e-37 | 2.2e-33 | 115.4 |
| habu1_s2388_g08708.t4 | 1 | 1 | Kinase-like | 168 | 308 | 6.9e-09 | 35.0 | 8.0e-12 | 3.0e-08 | 32.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2388_g08708.t4 | gi|557327149|ref|XP_006036537.1| | PREDICTED: cAMP-dependent protein kinase catalytic subunit alpha isoform X3 [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 47.9 |
| Venom grand-1 | 68.8 |
| Pit, infrared sensing | 46.1 |
| Nose | 47.7 |
| Brain-1 | 32.3 |
| Eye | 53.2 |
| fetal fibroblast | 65.7 |
| venom gland-2 | 108.5 |
| Brain-2 | 27.0 |
| Spleen | 31.7 |
| Lung | 43.8 |
| Liver | 25.8 |
| Kidney | 36.5 |
| Pancreas | 33.6 |
| Small intestine | 33.2 |
| Large intestine | 31.9 |
| Stomach | 46.5 |
| heart | 60.0 |
| ovary | 82.7 |
| cheek muscle | 198.3 |
Transcript
| Transcript ID | habu1_s2388_g08708.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08708.t1 atacccactgtgacctgttaactatatgctggtgacttcgaaagcagcagggtgacctgatggaaccttgggattgaatc ctatcaaatggatgtgaaggagtttcttgcaaaagccaaagaagaattccttaagaaatgggagaatccatcacagaaca catccagtttggatcatttcgatcggctcaagaccctgggtacaggctctttcgggcgggtgatgcttgtgaagcacaag gactctggaaattattttgccatgaaaatccttgataagcagaaagttgttaaactgaagcagattgagcacaccctcaa tgaaaaacgcattcttcaggctgtgaacttcccattccttgtcaggctagagtattctttcaaggataattcaaatctgt acatggtgatggaatacatcccaggtggtgagatgttctcccacctacgacggattggcaggttcagtgaacctcatgcc cggttctatgccgctcagattgtgttgacttttgagtacctgcactcactagatcttatctaccgagacttgaagcctga gaatctcctcattgaccagcagggctatattgaggtcacagattttggctttgccaaacgagtgaaaggccgaacatgga ctctttgcgggactccagaatatttggctcctgaaatcattttgagtaagggttataacaaagcagtggattggtgggca cttggtgtcctcatctatgagatggcagctggctatcctccattctttgcagaccagcccattcagatctatgagaaaat tgtctctggaaaggtccgcttcccatcccacttcagctcagatctgaaggacctgttgcgtaacctgctacaggtagacc tcaccaaacgctttggcaacctcaaaaatggagtcaacgacatcaagaatcacaagtggtttgcaaccactgattggatt gccatctaccaacggaaggtggaagctccttttataccaaagtgcaaaggaccgggtgacacaagtaactttgatgacta tgaagaagaggagatccgggtgtctatcactgaaaaatgcgtcaaggagttttcagaattttagggccagccccctttgc tttgtgtgcccaggaaaagaaagggcttgatttgatcagcctcaagggccagagttccttgcctatttgttaatttgggg aggtgggagagtgttggggttcacctggatctgtttgggcagaagagagaaaaggggaattcatttgaagctgtggaaaa gacagtagtctgaatgtcatccacccaccatccactgcaagctataaggtggctccccgccactctcaggcagtttttaa aacaaattcccttcctgcttacattgactccaatccatacacaaaccctaattggacagtccctggttttttggtggctt tttatttttaagggaaagggaatactttgtaattcatcaccatctctaacgatttggttcatggggcattgcaaaaaaaa aaaaagggaagggaattggggaaggcagaaagtaaacacatccacacaacactttggtgtttagaccagcattaaatggg ttacaacccaattgtctc |
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| Transcript ID | habu1_s2388_g08708.t2 |
| Definition | - |
>habu1_s2388_g08708.t2 gtatatgagggacccgtcacgatctgaaggccaataacagctcgggccatgctgatgagaccagtgagcgaacgtgagca acctgggtagccaatagcatgcgaggtcggggcggtgcctgcgcagctgctgctgccaggggaagagggggcggaggcaa caccgggtctgccggggagggggggattgggcctggctgggcccagccggagcctcctgcagcctgggaccgactgtgcg gggagaccgccccctccccgtgggcccagccccgcctggccatgggcaacgcggccacggccaagaaaggcggcgagatt gagagtgtgaaggagtttcttgcaaaagccaaagaagaattccttaagaaatgggagaatccatcacagaacacatccag tttggatcatttcgatcggctcaagaccctgggtacaggctctttcgggcgggtgatgcttgtgaagcacaaggactctg gaaattattttgccatgaaaatccttgataagcagaaagttgttaaactgaagcagattgagcacaccctcaatgaaaaa cgcattcttcaggctgtgaacttcccattccttgtcaggctagagtattctttcaaggataattcaaatctgtacatggt gatggaatacatcccaggtggtgagatgttctcccacctacgacggattggcaggttcagtgaacctcatgcccggttct atgccgctcagattgtgttgacttttgagtacctgcactcactagatcttatctaccgagacttgaagcctgagaatctc ctcattgaccagcagggctatattgaggtcacagattttggctttgccaaacgagtgaaaggccgaacatggactctttg cgggactccagaatatttggctcctgaaatcattttgagtaagggttataacaaagcagtggattggtgggcacttggtg tcctcatctatgagatggcagctggctatcctccattctttgcagaccagcccattcagatctatgagaaaattgtctct ggaaaggtccgcttcccatcccacttcagctcagatctgaaggacctgttgcgtaacctgctacaggtagacctcaccaa acgctttggcaacctcaaaaatggagtcaacgacatcaagaatcacaagtggtttgcaaccactgattggattgccatct accaacggaaggtggaagctccttttataccaaagtgcaaaggaccgggtgacacaagtaactttgatgactatgaagaa gaggagatccgggtgtctatcactgaaaaatgcgtcaaggagttttcagaattttagggccagccccctttgctttgtgt gcccaggaaaagaaagggcttgatttgatcagcctcaagggccagagttccttgcctatttgttaatttggggaggtggg agagtgttggggttcacctggatctgtttgggcagaagagagaaaaggggaattcatttgaagctgtggaaaagacagta gtctgaatgtcatccacccaccatccactgcaagctataaggtggctccccgccactctcaggcagtttttaaaacaaat tcccttcctgcttacattgactccaatccatacacaaaccctaattggacagtccctggttttttggtggctttttattt ttaagggaaagggaatactttgtaattcatcaccatctctaacgatttggttcatggggcattgcaaaaaaaaaaaaagg gaagggaattggggaaggcagaaagtaaacacatccacacaacactttggtgtttagaccagcattaaatgggttacaac ccaattgtctc |
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| Transcript ID | habu1_s2388_g08708.t3 |
| Definition | - |
>habu1_s2388_g08708.t3 gtatatgagggacccgtcacgatctgaaggccaataacagctcgggccatgctgatgagaccagtgagcgaacgtgagca acctgggtagccaatagcatgcgaggtcggggcggtgcctgcgcagctgctgctgccaggggaagagggggcggaggcaa caccgggtctgccggggagggggggattgggcctggctgggcccagccggagcctcctgcagcctgggaccgactgtgcg gggagaccgccccctccccgtgggcccagccccgcctggccatgggcaacgcggccacggccaagaaaggcggcgagatt gagagtgtgaaggagtttcttgcaaaagccaaagaagaattccttaagaaatgggagaatccatcacagaacacatccag tttggatcatttcgatcggctcaagaccctgggtacaggctctttcgggcgggtgatgcttgtgaagcacaaggactctg gaaattattttgccatgaaaatccttgataagcagaaagttgttaaactgaagcagattgagcacaccctcaatgaaaaa cgcattcttcaggctgtgaacttcccattccttgtcaggctagagtattctttcaaggataattcaaatctgtacatggt gatggaatacatcccaggtggtgagatgttctcccacctacgacggattggcaggttcagtgaacctcatgcccggttct atgccgctcagattgtgttgacttttgagtacctgcactcactagatcttatctaccgagacttgaagcctgagaatctc ctcattgaccagcagggctatattgaggtcacagattttggctttgccaaacgagtgaaaggccgaacatggactctttg cgggactccagaatatttggctcctgaaatcattttgagtaagggttataacaaagcagtggattggtgggcacttggtg tcctcatctatgagatggcagctggctatcctccattctttgcagaccagcccattcagatctatgagaaaattgtctct ggaaaggtccgcttcccatcccacttcagctcagatctgaaggacctgttgcgtaacctgctacaggtagacctcaccaa acgctttggcaacctcaaaaatggagtcaacgacatcaagaatcacaagtggtttgcaaccactgattggattgccatct accaacggaaggtggaagctccttttataccaaagtgcaaaggaccgggtgacacaagtaactttgatgactatgaagaa gaggagatccgggtgtctatcactgaaaaatgcgtcaaggagttttcagaattttagggccagccccctttgctttgtgt gcccaggaaaagaaagggcttgatttgatcagcctcaagggccagagttccttgcctatttgttaatttggggaggtggg agagtgttggggttcacctggatctgtttgggcagaagagagaaaaggggaattcatttgaagctgtggaaaagacagta gtctgaatgtcatccacccaccatccactgcaagctataaggtggctccccgccactctcaggcagtttttaaaacaaat tcccttcctgcttacattgactccaatccatacacaaaccctaattggacagtccctggttttttggtggctttttattt ttaagggaaagggaatactttgtaattcatcaccatctctaacgatttggttcatggggcattgcaaaaaaaaaaaaagg gaagggaattggggaaggcagaaagtaaacacatccacacaacactttggtgtttagaccagcattaaatgggttacaac ccaattgtctc |
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| Transcript ID | habu1_s2388_g08708.t4 |
| Definition | - |
>habu1_s2388_g08708.t4 gtatatgagggacccgtcacgatctgaaggccaataacagctcgggccatgctgatgagaccagtgagcgaacgtgagca acctgggtagccaatagcatgcgaggtcggggcggtgcctgcgcagctgctgctgccaggggaagagggggcggaggcaa caccggtttggtcttcagatttctactgtcatatttaattatcatctttaatctgaatcttattgtgaaggagtttcttg caaaagccaaagaagaattccttaagaaatgggagaatccatcacagaacacatccagtttggatcatttcgatcggctc aagaccctgggtacaggctctttcgggcgggtgatgcttgtgaagcacaaggactctggaaattattttgccatgaaaat ccttgataagcagaaagttgttaaactgaagcagattgagcacaccctcaatgaaaaacgcattcttcaggctgtgaact tcccattccttgtcaggctagagtattctttcaaggataattcaaatctgtacatggtgatggaatacatcccaggtggt gagatgttctcccacctacgacggattggcaggttcagtgaacctcatgcccggttctatgccgctcagattgtgttgac ttttgagtacctgcactcactagatcttatctaccgagacttgaagcctgagaatctcctcattgaccagcagggctata ttgaggtcacagattttggctttgccaaacgagtgaaaggccgaacatggactctttgcgggactccagaatatttggct cctgaaatcattttgagtaagggttataacaaagcagtggattggtgggcacttggtgtcctcatctatgagatggcagc tggctatcctccattctttgcagaccagcccattcagatctatgagaaaattgtctctggaaaggtccgcttcccatccc acttcagctcagatctgaaggacctgttgcgtaacctgctacaggtagacctcaccaaacgctttggcaacctcaaaaat ggagtcaacgacatcaagaatcacaagtggtttgcaaccactgattggattgccatctaccaacggaaggtggaagctcc ttttataccaaagtgcaaaggaccgggtgacacaagtaactttgatgactatgaagaagaggagatccgggtgtctatca ctgaaaaatgcgtcaaggagttttcagaattttagggccagccccctttgctttgtgtgcccaggaaaagaaagggcttg atttgatcagcctcaagggccagagttccttgcctatttgttaatttggggaggtgggagagtgttggggttcacctgga tctgtttgggcagaagagagaaaaggggaattcatttgaagctgtggaaaagacagtagtctgaatgtcatccacccacc atccactgcaagctataaggtggctccccgccactctcaggcagtttttaaaacaaattcccttcctgcttacattgact ccaatccatacacaaaccctaattggacagtccctggttttttggtggctttttatttttaagggaaagggaatactttg taattcatcaccatctctaacgatttggttcatggggcattgcaaaaaaaaaaaaagggaagggaattggggaaggcaga aagtaaacacatccacacaacactttggtgtttagaccagcattaaatgggttacaacccaattgtctc |
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Protein
| Protein ID | habu1_s2388_g08708.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08708.t1 MDVKEFLAKAKEEFLKKWENPSQNTSSLDHFDRLKTLGTGSFGRVMLVKHKDSGNYFAMKILDKQKVVKLKQIEHTLNEK RILQAVNFPFLVRLEYSFKDNSNLYMVMEYIPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL LIDQQGYIEVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKCKGPGDTSNFDDYEE EEIRVSITEKCVKEFSEF |
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| Protein ID | habu1_s2388_g08708.t2 |
| Definition | - |
>habu1_s2388_g08708.t2 MRGRGGACAAAAARGRGGGGNTGSAGEGGIGPGWAQPEPPAAWDRLCGETAPSPWAQPRLAMGNAATAKKGGEIESVKEF LAKAKEEFLKKWENPSQNTSSLDHFDRLKTLGTGSFGRVMLVKHKDSGNYFAMKILDKQKVVKLKQIEHTLNEKRILQAV NFPFLVRLEYSFKDNSNLYMVMEYIPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG YIEVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKCKGPGDTSNFDDYEEEEIRVS ITEKCVKEFSEF |
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| Protein ID | habu1_s2388_g08708.t3 |
| Definition | - |
>habu1_s2388_g08708.t3 MGNAATAKKGGEIESVKEFLAKAKEEFLKKWENPSQNTSSLDHFDRLKTLGTGSFGRVMLVKHKDSGNYFAMKILDKQKV VKLKQIEHTLNEKRILQAVNFPFLVRLEYSFKDNSNLYMVMEYIPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS LDLIYRDLKPENLLIDQQGYIEVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF ADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKCK GPGDTSNFDDYEEEEIRVSITEKCVKEFSEF |
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| Protein ID | habu1_s2388_g08708.t4 |
| Definition | - |
>habu1_s2388_g08708.t4 MRGRGGACAAAAARGRGGGGNTGLVFRFLLSYLIIIFNLNLIVKEFLAKAKEEFLKKWENPSQNTSSLDHFDRLKTLGTG SFGRVMLVKHKDSGNYFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVRLEYSFKDNSNLYMVMEYIPGGEMFSHL RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIEVTDFGFAKRVKGRTWTLCGTPEYLAPEIILS KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIK NHKWFATTDWIAIYQRKVEAPFIPKCKGPGDTSNFDDYEEEEIRVSITEKCVKEFSEF |
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