Gene
| Gene Model ID | habu1_s2388_g08709 |
|---|---|
| Locus | habu1_scaffold2388 : 1483693 ... 1490393 : - |
| To GenomeBrowser | habu1_scaffold2388:1483693..1490393 |
| Genes list of scaffold | habu1_scaffold2388 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| histone chaperone asf1b | GO:0000790 GO:0006335 GO:0006336 GO:0042393 GO:0043234 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2388_g08709.t1 | 1 | 1 | ASF1_hist_chap | 1 | 140 | 0.0 | 175.9 | 0.0 | 0.0 | 169.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2388_g08709.t1 | gi|602674305|ref|XP_007442644.1| | PREDICTED: histone chaperone ASF1B-like [Python bivittatus] | 0.0 |
| habu1_s2388_g08709.t1 | gi|637268487|ref|XP_003217351.2| | PREDICTED: histone chaperone ASF1B isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s2388_g08709.t1 | gi|530608942|ref|XP_005296123.1| | PREDICTED: histone chaperone ASF1B [Chrysemys picta bellii] | 0.0 |
| habu1_s2388_g08709.t1 | gi|637268491|ref|XP_008102819.1| | PREDICTED: histone chaperone ASF1B isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s2388_g08709.t1 | gi|724815918|ref|XP_010359885.1| | PREDICTED: histone chaperone ASF1B [Rhinopithecus roxellana] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.8 |
| Venom grand-1 | 2.5 |
| Pit, infrared sensing | 2.7 |
| Nose | 1.4 |
| Brain-1 | 0.8 |
| Eye | 1.9 |
| fetal fibroblast | 16.9 |
| venom gland-2 | 1.7 |
| Brain-2 | 0.4 |
| Spleen | 1.0 |
| Lung | 1.5 |
| Liver | 0.0 |
| Kidney | 0.1 |
| Pancreas | 1.0 |
| Small intestine | 0.7 |
| Large intestine | 0.3 |
| Stomach | 0.4 |
| heart | 0.7 |
| ovary | 36.8 |
| cheek muscle | 1.2 |
Transcript
| Transcript ID | habu1_s2388_g08709.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08709.t1 gggtttgggaaaggagcccgaaggaggcgggacagaacaccgagaagcgagcgaacctgtcatggcgcgagtgtcggttt tgggagtttcgctgctggagaatccgagcccgtttgaccacccgctccgcttccaggtgcagttcgagtgcggagaggcg ttgccccacgatttggaatggaagatcatctatgtgggatctgcagagagtgaggaatatgatcaaattcttgattctgt actggcaaatagtcccaaccctgatctaatccctgaaagtgatgctgtgggagttacagtaatactcattacttgcacct acctttgtcaggagtttatccgcattgggtattatgtgaacaatgaatatataaatcctgaattaagggagaacccacct ctcaaaccagacttttcccagttgcagaggaatattctggcctccaatccccgagtcacccgtttccacatcaattggga tggtcctaaagatcagatggacaatattgaaaatgtagagccggagcctgatggtttcctatcttctagctgtgcctaca tcaaaggattgatcccttctgcaggcttgcaacctgaaaattcaatggactgcatataaaacaggcagaagaatttaaag atgcagaaaattgcagctaaatgaattatttgaaaaatctgtgaagagatatggattcttatggccagtaaagcaatggg agtcctaattgtta |
|
Protein
| Protein ID | habu1_s2388_g08709.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08709.t1 MARVSVLGVSLLENPSPFDHPLRFQVQFECGEALPHDLEWKIIYVGSAESEEYDQILDSVLANSPNPDLIPESDAVGVTV ILITCTYLCQEFIRIGYYVNNEYINPELRENPPLKPDFSQLQRNILASNPRVTRFHINWDGPKDQMDNIENVEPEPDGFL SSSCAYIKGLIPSAGLQPENSMDCI |
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