Gene
| Gene Model ID | habu1_s2388_g08715 |
|---|---|
| Locus | habu1_scaffold2388 : 1864315 ... 1911552 : + |
| To GenomeBrowser | habu1_scaffold2388:1864315..1911552 |
| Genes list of scaffold | habu1_scaffold2388 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cd97 antigen | GO:0004930 GO:0005509 GO:0005886 GO:0007186 GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2388_g08715.t2 | 3 | 1 | EGF_CA | 34 | 63 | 4.0e-17 | 61.9 | 9.1e-07 | 0.0017 | 18.3 |
| habu1_s2388_g08715.t2 | 1 | 1 | EGF | 34 | 57 | 1.5e-08 | 34.3 | 9.1e-06 | 0.017 | 15.0 |
| habu1_s2388_g08715.t2 | 3 | 1 | EGF_3 | 35 | 57 | 2.9e-10 | 39.9 | 3.4e-07 | 0.00063 | 19.6 |
| habu1_s2388_g08715.t2 | 2 | 1 | cEGF | 125 | 155 | 6.3e-08 | 32.1 | 2.5e-08 | 4.5e-05 | 22.9 |
| habu1_s2388_g08715.t2 | 3 | 2 | EGF_CA | 152 | 195 | 4.0e-17 | 61.9 | 6.2e-12 | 1.1e-08 | 34.8 |
| habu1_s2388_g08715.t2 | 3 | 2 | EGF_3 | 156 | 184 | 2.9e-10 | 39.9 | 1.3e-07 | 0.00023 | 21.0 |
| habu1_s2388_g08715.t2 | 2 | 2 | cEGF | 176 | 200 | 6.3e-08 | 32.1 | 3.6e-07 | 0.00067 | 19.2 |
| habu1_s2388_g08715.t2 | 3 | 3 | EGF_CA | 197 | 231 | 4.0e-17 | 61.9 | 1.4e-11 | 2.5e-08 | 33.7 |
| habu1_s2388_g08715.t2 | 3 | 3 | EGF_3 | 203 | 227 | 2.9e-10 | 39.9 | 4.7e-07 | 0.00086 | 19.2 |
| habu1_s2388_g08715.t2 | 1 | 1 | GPS | 466 | 510 | 1.1e-14 | 54.2 | 5.7e-18 | 1.1e-14 | 54.2 |
| habu1_s2388_g08715.t2 | 1 | 1 | 7tm_2 | 520 | 751 | 0.0 | 211.7 | 0.0 | 0.0 | 211.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2388_g08715.t2 | gi|612011533|ref|XP_007489121.1| | PREDICTED: CD97 antigen isoform X4 [Monodelphis domestica] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 7.9 |
| Venom grand-1 | 1.5 |
| Pit, infrared sensing | 8.2 |
| Nose | 5.7 |
| Brain-1 | 1.6 |
| Eye | 3.8 |
| fetal fibroblast | 22.4 |
| venom gland-2 | 1.4 |
| Brain-2 | 0.9 |
| Spleen | 5.3 |
| Lung | 12.9 |
| Liver | 2.3 |
| Kidney | 1.5 |
| Pancreas | 0.8 |
| Small intestine | 4.3 |
| Large intestine | 5.6 |
| Stomach | 4.9 |
| heart | 1.1 |
| ovary | 13.1 |
| cheek muscle | 0.9 |
Transcript
| Transcript ID | habu1_s2388_g08715.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08715.t1 tccgcacctgagtcttcgcccgttcttagcagcatggccaagctcaccctctggcagctcctggctaccggcctcctcat tttctttttccagtcagttcttctccaaaatcaagttggcaataattgtctaaatccctgtggaaaaaatgctttgtgta agaatgtctctgggaattacagctgctcttgccaaaggggattttggagaaactcaaataaagagaaaactttcaagaat atcagtgaaaatgactgtatatcttgcaagaggtacccaaaagaagaaaagtgtaagaaaggatatcagcagtgcattgg tgatactgaaaaatgttgtgctgattctacctgtgaaagtgaacagtgtggaaaacatggtatatgtaagagagactgtg cagacttctattgcaagtgcaaaccaggattttacttacctaaggggggaagtgagttcaagaatgtgaatgaagataat tgtgaagatattaatgagtgtaatggaaatcattgtgatgaaactgcccattgcatcaactatgaaggaagttattcatg ttactgcccgccaggatatttccaatattccaatgctgtccaggaaaataaaacaaagataaaatgcaaagagttcaact atcccatatcttcgtggaataactgtacagataaacagagtttcctttgcaacattactactcagctgggaaacctcttt ggttcaccgccaaatgtgagcagccaaatggattcgaagaggcatttgtgggaaacactggacaaagtggacaatctgtt gaacttgatggaggctgagaataagcagcaaagtcaccaggtggcgactaagataatggagctgatggaggccaggctca ggatgtttgcgttttccttacccaatggaaccaccaccatcaagcccaaagcaggcacaaagctggtgatggaaatcagg acagctgagaacacaagccaaggtctggcacaactgtggctggaggaaacacagatggaaataagctgggaagcagcgag caagaagggagaaggccccagtgttgttggcctcctgtcttatgaggacctgggatccatcctgacaggtgcacatgttg aaggaagtgactgggagaaaattgtaaagtcaaagcaagagaccggcaagcccaactataaagtattgtccaaggtggca tctgcttttgtaggccataatgagaccactgccctaagcaatcctgtcacgttttcctttaaccatccagaaccagaatc aaatgttgagaaggtgatttgtgctttttggaagcccactgaaacgggtggaaattggtctcaagaaggttgtgaacgtc tgaacatcagtactgctaacaggacatattgccgctgcaaccatctgaccagctttgcagtgctcatggccttctatgat gtggaggattggggcctgtctatcatcacaaagattgggctggttgcatctctgatctgcctcttcttctccatcctcac cttcctgttctgccgtgccatccaaggtatccgcaccaccatccacctccacctttgcctggccctctttgctgcccatg tcatcttcttgggcgctgggatatctagcaatacgatggcatgtgttgtagttgctggattgctccattatttcttcctc tgcgtcttctgttggatgctactggagggtgtgcagctctacctgatggtagttcaggtcttcaacacacatagccttaa acactggcacatcttccttgtgggatatgggctccccgctgtcttggtgggcatctctgctgccatcaacagcaaaggat atagcagaaaaaactgctggctttccagggaacgtgggttcttgtggagcttcctgggacctgtctccttcatcatcatg gtcaatgctgttgtctttcttattactgtctggaggctttccgagaagtttgctgacattaaccctgatatgactaaatt gaaaaagcagagggtgctcacaatcacagccattgcacagctctgtattctaggcatcacttggatctttggcttgtttc agttcagcaaccaaaccctcgtcatgtcttacctctttaccatctttaatagcctacagggtctcttcatcttcctcctg cactgtgtactcaagaaacaggtgcgtgatgactattatcgctggttgtgccagggcagacgtggcaagacccagagttc tgacaagtattcagaattcagttccacatccggttccaacacgttaaggactcccaaaaccttgaaagaatctggaatat aacaacagttttcagaaataatgaatttcaggactgctgctttgcatataaacatttccagggaaaagaccggctggata acagaactattgcctgctgattcagacctactgcaataaggacagtgaaactgccagaaacctataaagagatccaagct ctggaaccgagcccacattaatcttatattggtacagggcttcatcaaatgttcccttttcattcatgctaagggtcttc tctctcaaagagaggaacatttctttttaaaagggtacttctacatatgacactttcataaaaggtccttcccgtggaca ttggttagtcgtctgcctggctattatgcatcaaaaatttgaagtgaattttacataacaggaatgatgtttttcatcca gtacaagtggcctatggactgatctgatagcatttcccctaatgcttattaagttattttcaagtataaacctatgattg tttgcagtacctattaagacaagtagaaacagggatggtaaatatggtctatcaagtgtatttaaggagttaggcaaggc aaaggattggcaaggatgctgtaatttaggactggacaaagaacttcacattattttgctttggaattacatttgtccaa aatatataaattttgaattccgccaatcaatgagattataaagccaggtccctttttaggtagctataaagttgttctgg tttgaatagtcctgcaaataaaaatgtagaaacatagcatagtg |
|
| Transcript ID | habu1_s2388_g08715.t2 |
| Definition | - |
>habu1_s2388_g08715.t2 tccgcacctgagtcttcgcccgttcttagcagcatggccaagctcaccctctggcagctcctggctaccggcctcctcat tttctttttccagtcagttcttctccaaaatcaagttggcaataattgtctaaatccctgtggaaaaaatgctttgtgta agaatgtctctgggaattacagctgctcttgccaaaggggattttggagaaactcaaataaagagaaaactttcaagaat atcagtgaaaatgactgtatatcttgcaagaggtacccaaaagaagaaaagtgtaagaaaggatatcagcagtgcattgg tgatactgaaaaatgttgtgctgattctacctgtgaaagtgaacagtgtggaaaacatggtatatgtaagagagactgtg cagacttctattgcaagtgcaaaccaggattttacttacctaaggggggaagtgagttcaagaatgtgaatgaagataat tgtgaagacattgatgagtgcaagagaaatgtttccacctgtggtcccaaggggagctgcattaacactgaaggggatta ccactgtaaatgcaagcaaggatatggaaagagccctaaagatgatagaaagctatgcagagatattaatgagtgtaatg gaaatcattgtgatgaaactgcccattgcatcaactatgaaggaagttattcatgttactgcccgccaggatatttccaa tattccaatgctgtccaggaaaataaaacaaagataaaatgcaaagagttcaactatcccatatcttcgtggaataactg tacagataaacagagtttcctttgcaacattactactcagctgggaaacctctttggttcaccgccaaatgtgagcagcc aaatggattcgaagaggcatttgtgggaaacactggacaaagtggacaatctgttgaacttgatggaggctgagaataag cagcaaagtcaccaggtggcgactaagataatggagctgatggaggccaggctcaggatgtttgcgttttccttacccaa tggaaccaccaccatcaagcccaaagcaggcacaaagctggtgatggaaatcaggacagctgagaacacaagccaaggtc tggcacaactgtggctggaggaaacacagatggaaataagctgggaagcagcgagcaagaagggagaaggccccagtgtt gttggcctcctgtcttatgaggacctgggatccatcctgacaggtgcacatgttgaaggaagtgactgggagaaaattgt aaagtcaaagcaagagaccggcaagcccaactataaagtattgtccaaggtggcatctgcttttgtaggccataatgaga ccactgccctaagcaatcctgtcacgttttcctttaaccatccagaaccagaatcaaatgttgagaaggtgatttgtgct ttttggaagcccactgaaacgggtggaaattggtctcaagaaggttgtgaacgtctgaacatcagtactgctaacaggac atattgccgctgcaaccatctgaccagctttgcagtgctcatggccttctatgatgtggaggattggggcctgtctatca tcacaaagattgggctggttgcatctctgatctgcctcttcttctccatcctcaccttcctgttctgccgtgccatccaa ggtatccgcaccaccatccacctccacctttgcctggccctctttgctgcccatgtcatcttcttgggcgctgggatatc tagcaatacgatggcatgtgttgtagttgctggattgctccattatttcttcctctgcgtcttctgttggatgctactgg agggtgtgcagctctacctgatggtagttcaggtcttcaacacacatagccttaaacactggcacatcttccttgtggga tatgggctccccgctgtcttggtgggcatctctgctgccatcaacagcaaaggatatagcagaaaaaactgctggctttc cagggaacgtgggttcttgtggagcttcctgggacctgtctccttcatcatcatggtcaatgctgttgtctttcttatta ctgtctggaggctttccgagaagtttgctgacattaaccctgatatgactaaattgaaaaagcagagggtgctcacaatc acagccattgcacagctctgtattctaggcatcacttggatctttggcttgtttcagttcagcaaccaaaccctcgtcat gtcttacctctttaccatctttaatagcctacagggtctcttcatcttcctcctgcactgtgtactcaagaaacaggtgc gtgatgactattatcgctggttgtgccagggcagacgtggcaagacccagagttctgacaagtattcagaattcagttcc acatccggttccaacacgttaaggactcccaaaaccttgaaagaatctggaatataacaacagttttcagaaataatgaa tttcaggactgctgctttgcatataaacatttccagggaaaagaccggctggataacagaactattgcctgctgattcag acctactgcaataaggacagtgaaactgccagaaacctataaagagatccaagctctggaaccgagcccacattaatctt atattggtacagggcttcatcaaatgttcccttttcattcatgctaagggtcttctctctcaaagagaggaacatttctt tttaaaagggtacttctacatatgacactttcataaaaggtccttcccgtggacattggttagtcgtctgcctggctatt atgcatcaaaaatttgaagtgaattttacataacaggaatgatgtttttcatccagtacaagtggcctatggactgatct gatagcatttcccctaatgcttattaagttattttcaagtataaacctatgattgtttgcagtacctattaagacaagta gaaacagggatggtaaatatggtctatcaagtgtatttaaggagttaggcaaggcaaaggattggcaaggatgctgtaat ttaggactggacaaagaacttcacattattttgctttggaattacatttgtccaaaatatataaattttgaattccgcca atcaatgagattataaagccaggtccctttttaggtagctataaagttgttctggtttgaatagtcctgcaaataaaaat gtagaaacatagcatagtg |
|
Protein
| Protein ID | habu1_s2388_g08715.t1 |
|---|---|
| Definition | - |
>habu1_s2388_g08715.t1 MAKLTLWQLLATGLLIFFFQSVLLQNQVGNNCLNPCGKNALCKNVSGNYSCSCQRGFWRNSNKEKTFKNISENDCISCKR YPKEEKCKKGYQQCIGDTEKCCADSTCESEQCGKHGICKRDCADFYCKCKPGFYLPKGGSEFKNVNEDNCEDINECNGNH CDETAHCINYEGSYSCYCPPGYFQYSNAVQENKTKIKCKEFNYPISSWNNCTDKQSFLCNITTQLGNLFGSPPNVSSQMD SKRHLWETLDKVDNLLNLMEAENKQQSHQVATKIMELMEARLRMFAFSLPNGTTTIKPKAGTKLVMEIRTAENTSQGLAQ LWLEETQMEISWEAASKKGEGPSVVGLLSYEDLGSILTGAHVEGSDWEKIVKSKQETGKPNYKVLSKVASAFVGHNETTA LSNPVTFSFNHPEPESNVEKVICAFWKPTETGGNWSQEGCERLNISTANRTYCRCNHLTSFAVLMAFYDVEDWGLSIITK IGLVASLICLFFSILTFLFCRAIQGIRTTIHLHLCLALFAAHVIFLGAGISSNTMACVVVAGLLHYFFLCVFCWMLLEGV QLYLMVVQVFNTHSLKHWHIFLVGYGLPAVLVGISAAINSKGYSRKNCWLSRERGFLWSFLGPVSFIIMVNAVVFLITVW RLSEKFADINPDMTKLKKQRVLTITAIAQLCILGITWIFGLFQFSNQTLVMSYLFTIFNSLQGLFIFLLHCVLKKQVRDD YYRWLCQGRRGKTQSSDKYSEFSSTSGSNTLRTPKTLKESGI |
|
| Protein ID | habu1_s2388_g08715.t2 |
| Definition | - |
>habu1_s2388_g08715.t2 MAKLTLWQLLATGLLIFFFQSVLLQNQVGNNCLNPCGKNALCKNVSGNYSCSCQRGFWRNSNKEKTFKNISENDCISCKR YPKEEKCKKGYQQCIGDTEKCCADSTCESEQCGKHGICKRDCADFYCKCKPGFYLPKGGSEFKNVNEDNCEDIDECKRNV STCGPKGSCINTEGDYHCKCKQGYGKSPKDDRKLCRDINECNGNHCDETAHCINYEGSYSCYCPPGYFQYSNAVQENKTK IKCKEFNYPISSWNNCTDKQSFLCNITTQLGNLFGSPPNVSSQMDSKRHLWETLDKVDNLLNLMEAENKQQSHQVATKIM ELMEARLRMFAFSLPNGTTTIKPKAGTKLVMEIRTAENTSQGLAQLWLEETQMEISWEAASKKGEGPSVVGLLSYEDLGS ILTGAHVEGSDWEKIVKSKQETGKPNYKVLSKVASAFVGHNETTALSNPVTFSFNHPEPESNVEKVICAFWKPTETGGNW SQEGCERLNISTANRTYCRCNHLTSFAVLMAFYDVEDWGLSIITKIGLVASLICLFFSILTFLFCRAIQGIRTTIHLHLC LALFAAHVIFLGAGISSNTMACVVVAGLLHYFFLCVFCWMLLEGVQLYLMVVQVFNTHSLKHWHIFLVGYGLPAVLVGIS AAINSKGYSRKNCWLSRERGFLWSFLGPVSFIIMVNAVVFLITVWRLSEKFADINPDMTKLKKQRVLTITAIAQLCILGI TWIFGLFQFSNQTLVMSYLFTIFNSLQGLFIFLLHCVLKKQVRDDYYRWLCQGRRGKTQSSDKYSEFSSTSGSNTLRTPK TLKESGI |
|