Gene
| Gene Model ID | habu1_s2396_g08735 |
|---|---|
| Locus | habu1_scaffold2396 : 285800 ... 305735 : - |
| To GenomeBrowser | habu1_scaffold2396:285800..305735 |
| Genes list of scaffold | habu1_scaffold2396 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2396_g08735.t1 | 2 | 1 | LRR_4 | 61 | 98 | 4.1e-11 | 42.2 | 2.3e-09 | 2.7e-06 | 26.8 |
| habu1_s2396_g08735.t1 | 1 | 1 | LRR_8 | 83 | 133 | 2.0e-11 | 43.4 | 1.3e-12 | 1.4e-09 | 37.5 |
| habu1_s2396_g08735.t1 | 2 | 2 | LRR_4 | 83 | 122 | 4.1e-11 | 42.2 | 5.6e-10 | 6.4e-07 | 28.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2396_g08735.t1 | gi|602663215|ref|XP_007437242.1| | PREDICTED: uncharacterized protein LOC103066236 [Python bivittatus] | 0.0 |
| habu1_s2396_g08735.t1 | gi|557292798|ref|XP_006028908.1| | PREDICTED: leucine-rich repeat-containing protein 25 [Alligator sinensis] | 8.0e-32 |
| habu1_s2396_g08735.t1 | gi|512814163|ref|XP_004910991.1| | PREDICTED: leucine-rich repeat-containing protein 25-like [Xenopus (Silurana) tropicalis] | 3.0e-31 |
| habu1_s2396_g08735.t1 | gi|556968497|ref|XP_005993220.1| | PREDICTED: slit homolog 1 protein-like [Latimeria chalumnae] | 3.0e-29 |
| habu1_s2396_g08735.t1 | gi|529430512|ref|XP_005235063.1| | PREDICTED: inositol-3-phosphate synthase 1-A-like [Falco peregrinus] | 1.0e-23 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.7 |
| Venom grand-1 | 0.8 |
| Pit, infrared sensing | 4.7 |
| Nose | 3.7 |
| Brain-1 | 1.1 |
| Eye | 1.3 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 1.5 |
| Brain-2 | 1.3 |
| Spleen | 19.1 |
| Lung | 3.3 |
| Liver | 9.8 |
| Kidney | 1.3 |
| Pancreas | 1.9 |
| Small intestine | 2.5 |
| Large intestine | 5.1 |
| Stomach | 1.2 |
| heart | 1.7 |
| ovary | 0.6 |
| cheek muscle | 1.0 |
Transcript
| Transcript ID | habu1_s2396_g08735.t1 |
|---|---|
| Definition | - |
>habu1_s2396_g08735.t1 tccgttgaagacttcaattcaaggcatctgcttggtcttcattggaatctcagggctgggcttaatggattgatctagat cttcttttgagcttgttagctatgtggatccaccttattcccaggatgtggggactgctcgctactctgctgttttcccg ccttggatgccttgtggatgctgcttgttctaagaccaactttaaacccttcaatgacaccccatgcctgaatttcagtg gcagttttcttgtcaccaaagtcaatctcactatttggaaacaagtgaaagagttggatctgtccaataacaacatcaca gagttatcagaattggagtctgcagcaaaactggaatcgttgttccttcacaataataaattgaagagccttccttccga cttctttgacaaaacacccaacctgaaggtcctgagtctggagaagaaccaacttagctctatatccattgaagacttcc atccatgcctgaaggagctccgggtggactgccgctgcaatgtggcaggcagcattttgcattattgccacaactgctca gacagcggcatcaaatgccagtgcttcacttctgaaagactggataatgtaactgattactacaagaaggagtgccctga cactgggtatggtctctatattggcatcatcataccaatcttgattctgctcctgttggccatcctggctttctttgtaa tctggaggaagaaaagggccccaatcaaccaagaaaaacgaccttccgacacatctgaaggcacctctggacaatcaagg tacattagccgcttgtctccgccagggaacacaaatcaaaacatggagttccacaaggactatgagaacgtcttcaatga ccaatccaagggcaaagtgggcaaaatgaaaagtggccaagctaaccaccagagtcggaagcagaccaccgccaaaaggt ctccatcgaaaggtgagagcagagattcttctgaaggccatcagcccatctatgccaatactcaggaattatattacaac tatagtgggaagcctaacccggaagcagtagatgatgtctacattattccagaccagtgataccttgggtccatcaacac tgctatcaccaaggatgacccaaaacatctcctgggccttccctgttgcaatgcccatttttcagaacaccagaacattt ggccccaactttgctggcattttgtaaaccactgaagagctagatgggaactataggttgggtgagaccatcactgtggc tttctttagcatgattatggtgatgtggagaaatggattgtcttcaggcactattatgttatcttctcattgttgtttac cttgatattcattatgttttgttgatttggattacctatgtttactacctatgaggtaggacaccttctttgcttttgcc ccacactttggggcatgttaatccccagaggcaaggtgagccccaacgcttttggttttctgaatgagcgttaagacctg gctctgctaatgagcatgggagtataaaaggattatgctgccctggagatggcaaatggcttaaggacactccctctgcc ttgttaaactgaatttttaaaactttgattttctcttaactggtaaattttaaccttgttcttaattctgtttttaaccc tgtttttaaccatgtgtttagattgctttatgatgtggtaaaccgttcagagtaacttaagggagatgggcagtatagaa atgtaataaaataaatgtaaataaataaacagatataataaatcaataaatggtcattttctga |
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Protein
| Protein ID | habu1_s2396_g08735.t1 |
|---|---|
| Definition | - |
>habu1_s2396_g08735.t1 MWIHLIPRMWGLLATLLFSRLGCLVDAACSKTNFKPFNDTPCLNFSGSFLVTKVNLTIWKQVKELDLSNNNITELSELES AAKLESLFLHNNKLKSLPSDFFDKTPNLKVLSLEKNQLSSISIEDFHPCLKELRVDCRCNVAGSILHYCHNCSDSGIKCQ CFTSERLDNVTDYYKKECPDTGYGLYIGIIIPILILLLLAILAFFVIWRKKRAPINQEKRPSDTSEGTSGQSRYISRLSP PGNTNQNMEFHKDYENVFNDQSKGKVGKMKSGQANHQSRKQTTAKRSPSKGESRDSSEGHQPIYANTQELYYNYSGKPNP EAVDDVYIIPDQ |
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