Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2396_g08737
Locus habu1_scaffold2396 : 376590 ... 389555 : -
To GenomeBrowser habu1_scaffold2396:376590..389555
Genes list of scaffold habu1_scaffold2396

Annotation by Blast2GO
Annotation GO
inositol-3-phosphate synthase 1 EC:5.5.1.4 GO:0004512 GO:0006021 GO:0008654 GO:0019872

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s2396_g08737.t2 1 1 NAD_binding_5 57 487 0.0 369.3 0.0 0.0 369.0
habu1_s2396_g08737.t2 1 1 Inos-1-P_synth 304 417 7.00649e-45 151.3 0.0 1.4013e-44 150.4

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 5.2
Venom grand-1 1.2
Pit, infrared sensing 6.6
Nose 5.6
Brain-1 87.5
Eye 119.0
fetal fibroblast 12.6
venom gland-2 4.0
Brain-2 42.3
Spleen 10.7
Lung 7.4
Liver 2.0
Kidney 2.6
Pancreas 0.8
Small intestine 1.9
Large intestine 2.7
Stomach 1.7
heart 0.6
ovary 75.9
cheek muscle 8.6

Transcript
Transcript IDhabu1_s2396_g08737.t1
Definition-
>habu1_s2396_g08737.t1
tcggggagaaaaagatgtagaattttttttttttccccgaagaggcggcgcctccggggagggggcggcgcctcctgtga
tttgataaaccccggcgcagtggaacggcgagtaggacttcaccgaccgttgaagctccagcacaaacatggcaacatca
tttctagtggacagcccaaatgtgaagtacactcaggagttcattgaggctaagtacacctatggcacagtacaggtctg
ccaggaaaatggtgtcaccaaggtcaagccaacttctactgatctcactttccgcacagacctgcgggtccccaagctgg
gtgtgatgcttgttggctgggggggaaacaatggcacaacagtgactgctgctgttttggccaataggctaggtctctct
tggatgaccaagaggggtcaaaagcatgccaactactatggctctcttttacaagcttccacagtatgtctcgggaccgg
tccctctggagatgtctatattcctttccatgatatgctccccatggtacatcctaatgacattgtttttgatggctggg
acatctcctccatgaatttggctgatgccatgcgcagggctgaggtcttggactggccccttcaagagcagctgcgcccc
tacatggtaggcctgaagcctcggccttccatctacatcccggagttcatcgctgccaatcaaggagaaagagctgacaa
tgttctgaccggaagcagaatagagcagttggctcaggttcgccatgatatccaggacttcaagaactccagtggggtag
agaagttgattgtcctctggacagccaacactgagtgcttctgcgaaatccatcctggagtgaatgatacagctagcaat
ttattcaaagcaattgaggctggccgggaggtttctccttctacactctttgctgtggcgagtatcctggaaggttgtac
ctacatcaatggctccccccaaaacacttttgtgccaggagttattgagcttgctatccagcacggggtctttatagccg
gagacgatttcaaatctggtcagacaaagctcaagtcagttctggtggacttcctcatcaactctggcattaagccagtc
tccattgttagctacaaccacttgggcaacaatgatggaaggaacctgtctgcaccagctcagttccgcgccaaggaaat
ctccaagagcaatgtggtggatgacatggtgaagtcgaaccccatcctatatggaccaggggaaaaaccagatcactgcg
tggtgatcaagtacctgccctaccttggtgacagcaagcgggcactagatgaatatacttcggagatcgctttggggggg
accaacaccatcgtcattcacaatgtgtgcgaggattcgttactggctgctcccataatcttagacttggtcattctggc
tgagctctgccaacggatccaagtgggcataggagactccgagccagagcgccttcacagcgtcttgtcccttttgagct
tcctctgcaaggctccccttgttcctaaaggcgctccagtggtcaacgcgctcttccgtcagcgggctgctattgagaac
ctattcagggcctgtgtggggctcccgccacaaaaccacatgcagctggaatacaggacccagagatcgtggagttttgc
aaagcaaggccattcccctgtgcccccagcttggctagccactcctaaaaaggcagccccccacgtgaatggctttgtgg
atcccattgaaagcaatggcctcccagactccagcgcccacagccactcacttaagtgacctgcaaaattagaaacccag
catgctccacggctagtcaacactgcatggtaaccagaccagatttacaacttggactatttgcctccttgacacacaca
cacacacacacacacacacacacaaccatcccattttgttgtatttggttacttagatttttatgtagtagtggcaaagc
tgtattttggagacaggcaacataccttatttttctgtgtccttacctgttatgaatgaaatttcatttgaacgcttgaa
tgtttgaaataagatgtaactatagtcatatctttcatctagttcagaaatttagatttattcggctatccttttttaat
ggagacattggaataaacacattgaaagatgagatgcct
Transcript IDhabu1_s2396_g08737.t2
Definition-
>habu1_s2396_g08737.t2
ggctaggggggaaaggagggcgggcgccggggctctcaggtagaggagccccttttcccctttcccgctccaccttttgt
cctcctgctctggagtcaggctttaaactgcccgaggaaagcgggcaacggaagcgaggcacctaggaagaggcgaggca
gccggttcctcgggaggagacgacgcacaaacatggcaacatcatttctagtggacagcccaaatgtgaagtacactcag
gagttcattgaggctaagtacacctatggcacagtacaggtctgccaggaaaatggtgtcaccaaggtcaagccaacttc
tactgatctcactttccgcacagacctgcgggtccccaagctgggtgtgatgcttgttggctgggggggaaacaatggca
caacagtgactgctgctgttttggccaataggctaggtctctcttggatgaccaagaggggtcaaaagcatgccaactac
tatggctctcttttacaagcttccacagtatgtctcgggaccggtccctctggagatgtctatattcctttccatgatat
gctccccatggtacatcctaatgacattgtttttgatggctgggacatctcctccatgaatttggctgatgccatgcgca
gggctgaggtcttggactggccccttcaagagcagctgcgcccctacatggtaggcctgaagcctcggccttccatctac
atcccggagttcatcgctgccaatcaaggagaaagagctgacaatgttctgaccggaagcagaatagagcagttggctca
ggttcgccatgatatccaggacttcaagaactccagtggggtagagaagttgattgtcctctggacagccaacactgagt
gcttctgcgaaatccatcctggagtgaatgatacagctagcaatttattcaaagcaattgaggctggccgggaggtttct
ccttctacactctttgctgtggcgagtatcctggaaggttgtacctacatcaatggctccccccaaaacacttttgtgcc
aggagttattgagcttgctatccagcacggggtctttatagccggagacgatttcaaatctggtcagacaaagctcaagt
cagttctggtggacttcctcatcaactctggcattaagccagtctccattgttagctacaaccacttgggcaacaatgat
ggaaggaacctgtctgcaccagctcagttccgcgccaaggaaatctccaagagcaatgtggtggatgacatggtgaagtc
gaaccccatcctatatggaccaggggaaaaaccagatcactgcgtggtgatcaagtacctgccctaccttggtgacagca
agcgggcactagatgaatatacttcggagatcgctttgggggggaccaacaccatcgtcattcacaatgtgtgcgaggat
tcgttactggctgctcccataatcttagacttggtcattctggctgagctctgccaacggatccaagtgggcataggaga
ctccgagccagagcgccttcacagcgtcttgtcccttttgagcttcctctgcaaggctccccttgttcctaaaggcgctc
cagtggtcaacgcgctcttccgtcagcgggctgctattgagaacctattcagggcctgtgtggggctcccgccacaaaac
cacatgcagctggaatacaggacccagagatcgtggagttttgcaaagcaaggccattcccctgtgcccccagcttggct
agccactcctaaaaaggcagccccccacgtgaatggctttgtggatcccattgaaagcaatggcctcccagactccagcg
cccacagccactcacttaagtgacctgcaaaattagaaacccagcatgctccacggctagtcaacactgcatggtaacca
gaccagatttacaacttggactatttgcctccttgacacacacacacacacacacacacacacacacaaccatcccattt
tgttgtatttggttacttagatttttatgtagtagtggcaaagctgtattttggagacaggcaacataccttatttttct
gtgtccttacctgttatgaatgaaatttcatttgaacgcttgaatgtttgaaataagatgtaactatagtcatatctttc
atctagttcagaaatttagatttattcggctatccttttttaatggagacattggaataaacacattgaaagatgagatg
cct

Protein
Protein IDhabu1_s2396_g08737.t1
Definition-
>habu1_s2396_g08737.t1
MATSFLVDSPNVKYTQEFIEAKYTYGTVQVCQENGVTKVKPTSTDLTFRTDLRVPKLGVMLVGWGGNNGTTVTAAVLANR
LGLSWMTKRGQKHANYYGSLLQASTVCLGTGPSGDVYIPFHDMLPMVHPNDIVFDGWDISSMNLADAMRRAEVLDWPLQE
QLRPYMVGLKPRPSIYIPEFIAANQGERADNVLTGSRIEQLAQVRHDIQDFKNSSGVEKLIVLWTANTECFCEIHPGVND
TASNLFKAIEAGREVSPSTLFAVASILEGCTYINGSPQNTFVPGVIELAIQHGVFIAGDDFKSGQTKLKSVLVDFLINSG
IKPVSIVSYNHLGNNDGRNLSAPAQFRAKEISKSNVVDDMVKSNPILYGPGEKPDHCVVIKYLPYLGDSKRALDEYTSEI
ALGGTNTIVIHNVCEDSLLAAPIILDLVILAELCQRIQVGIGDSEPERLHSVLSLLSFLCKAPLVPKGAPVVNALFRQRA
AIENLFRACVGLPPQNHMQLEYRTQRSWSFAKQGHSPVPPAWLATPKKAAPHVNGFVDPIESNGLPDSSAHSHSLK
Protein IDhabu1_s2396_g08737.t2
Definition-
>habu1_s2396_g08737.t2
MATSFLVDSPNVKYTQEFIEAKYTYGTVQVCQENGVTKVKPTSTDLTFRTDLRVPKLGVMLVGWGGNNGTTVTAAVLANR
LGLSWMTKRGQKHANYYGSLLQASTVCLGTGPSGDVYIPFHDMLPMVHPNDIVFDGWDISSMNLADAMRRAEVLDWPLQE
QLRPYMVGLKPRPSIYIPEFIAANQGERADNVLTGSRIEQLAQVRHDIQDFKNSSGVEKLIVLWTANTECFCEIHPGVND
TASNLFKAIEAGREVSPSTLFAVASILEGCTYINGSPQNTFVPGVIELAIQHGVFIAGDDFKSGQTKLKSVLVDFLINSG
IKPVSIVSYNHLGNNDGRNLSAPAQFRAKEISKSNVVDDMVKSNPILYGPGEKPDHCVVIKYLPYLGDSKRALDEYTSEI
ALGGTNTIVIHNVCEDSLLAAPIILDLVILAELCQRIQVGIGDSEPERLHSVLSLLSFLCKAPLVPKGAPVVNALFRQRA
AIENLFRACVGLPPQNHMQLEYRTQRSWSFAKQGHSPVPPAWLATPKKAAPHVNGFVDPIESNGLPDSSAHSHSLK

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