Gene
| Gene Model ID | habu1_s2396_g08740 |
|---|---|
| Locus | habu1_scaffold2396 : 484206 ... 489281 : + |
| To GenomeBrowser | habu1_scaffold2396:484206..489281 |
| Genes list of scaffold | habu1_scaffold2396 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2396_g08740.t1 | 1 | 1 | DDA1 | 32 | 59 | 5.4e-09 | 35.7 | 2.5e-12 | 7.6e-09 | 35.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2396_g08740.t1 | gi|727003976|ref|XP_010392097.1| | PREDICTED: DET1- and DDB1-associated protein 1 [Corvus cornix cornix] | 1.0e-12 |
| habu1_s2396_g08740.t1 | gi|545198911|ref|XP_003363867.2| | PREDICTED: LOW QUALITY PROTEIN: DET1- and DDB1-associated protein 1 [Equus caballus] | 2.0e-12 |
| habu1_s2396_g08740.t1 | gi|694973625|ref|XP_009433255.1| | PREDICTED: DET1- and DDB1-associated protein 1, partial [Pan troglodytes] | 2.0e-12 |
| habu1_s2396_g08740.t1 | gi|544509531|ref|XP_005588432.1| | PREDICTED: DET1- and DDB1-associated protein 1 [Macaca fascicularis] | 2.0e-12 |
| habu1_s2396_g08740.t1 | gi|635036933|ref|XP_007993905.1| | PREDICTED: DET1- and DDB1-associated protein 1 [Chlorocebus sabaeus] | 2.0e-12 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.7 |
| Venom grand-1 | 1.5 |
| Pit, infrared sensing | 1.6 |
| Nose | 1.0 |
| Brain-1 | 1.0 |
| Eye | 2.2 |
| fetal fibroblast | 1.4 |
| venom gland-2 | 3.0 |
| Brain-2 | 1.3 |
| Spleen | 1.2 |
| Lung | 0.4 |
| Liver | 0.3 |
| Kidney | 0.3 |
| Pancreas | 0.5 |
| Small intestine | 0.7 |
| Large intestine | 0.8 |
| Stomach | 0.5 |
| heart | 0.9 |
| ovary | 6.8 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s2396_g08740.t1 |
|---|---|
| Definition | - |
>habu1_s2396_g08740.t1 tcagtttccgccataagccgaccaatggcctttctgatgggcgtcgccgagcagggaacccagcaggaggaggaggagga ggagaaggacgacgacgacgacgatgagaagttggctgactttctgaaaggattgccagtttataacaaaagcaacttca gccgattccatgcagattctgtatgcaaagcatcgataacagaacagaagaccttcagtttatcttccaacacgggaata tccatcagaacagagtaagtccctgcctgcttttgttattcctgcccactgtccatggaaacttgttactgtgtatgtat aaaggaaatttgtgtattttatatttctaaacaattaaaaatataggtaacttgtaccttt |
|
Protein
| Protein ID | habu1_s2396_g08740.t1 |
|---|---|
| Definition | - |
>habu1_s2396_g08740.t1 MAFLMGVAEQGTQQEEEEEEKDDDDDDEKLADFLKGLPVYNKSNFSRFHADSVCKASITEQKTFSLSSNTGISIRTE |
|