Gene
| Gene Model ID | habu1_s2440_g08890 |
|---|---|
| Locus | habu1_scaffold2440 : 176516 ... 202889 : + |
| To GenomeBrowser | habu1_scaffold2440:176516..202889 |
| Genes list of scaffold | habu1_scaffold2440 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2440_g08890.t3 | 1 | 1 | Tetraspannin | 103 | 326 | 4.4e-33 | 114.4 | 1.2e-36 | 6.1e-33 | 113.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2440_g08890.t3 | gi|530566837|ref|XP_005279954.1| | PREDICTED: tetraspanin-7-like [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.2 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.1 |
| Brain-1 | 0.2 |
| Eye | 0.0 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.4 |
| Brain-2 | 0.1 |
| Spleen | 0.1 |
| Lung | 0.1 |
| Liver | 0.0 |
| Kidney | 0.5 |
| Pancreas | 0.1 |
| Small intestine | 0.1 |
| Large intestine | 0.1 |
| Stomach | 2.6 |
| heart | 0.0 |
| ovary | 280.2 |
| cheek muscle | 4.8 |
Transcript
| Transcript ID | habu1_s2440_g08890.t1 |
|---|---|
| Definition | - |
>habu1_s2440_g08890.t1 cgtagctggcaagcggcagagacggagcaggccgaccaccagctggcccagctcaagggaggtgcctttcctcccttggt ctgggccagctggtagtcggcctgctccatctctgccgcttgccagctacgcctcggccggcacagggggcggaaccaca catgcacggcactcccgggcagggaaagtcctcgacttacgaccagtttagtcctcgacttacgaccggtttagtcctcg acttacgaccgcaattaaaacgttttgtgaggccacaagttttccaaggtgttgctggagttgtgttaataaccacaggt gtgtgtgttcaagtgaaactccattatgcttttgtggtactgaatgaagctgcttcaggagtagctgtgaccgtaacagt cattggtgtgcttatcatcattctgtctggctttggagcaattgctttattcagatcgagcaaagccatgatcaaatttt tcacaggtttactcgtgttgctcttgatcaccgaaattctggttgttgccactgcctatgcatgcagagtaaagctacac cagaccgtatccaaagatttcatgaagattctgaacaagtataataagaaactgcagatcaccaagggggtggatattct ccaggcagagtttcagtgctgtggcgcggagaactatacagactggcaaaacaccacctttggactgctctcctcatctg tccccaaaagctgctgcaaaatacctgtggaaagctgtgttactgatctaaatgaagatacagttggcattaatcaggag ggctgtcttctaaaactgaagagctggactgaaagaaacatttctgcatttggaggacttgcagttcttatagtatttgg tcaggtaactgggatcctgctttgctatattctgctgaaaataataaacgaagactatgacaacattgaacaggcttaag aaaccggtattctttgaacaagcttaagaagccagtattcattttgtggctgcaaaactgaattgaaattgaaatacaat atgtttttttttctttttgtcttgccaaatatgaagtgcaccaaataaaatgttctaaagtacaattgttg |
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| Transcript ID | habu1_s2440_g08890.t2 |
| Definition | - |
>habu1_s2440_g08890.t2 tcgaggactacccaaccggtcgtgcctttcctcccttggtctgggccagctggtagtcggcctgctccatctctgccgct tgccagctacgcctcggccggcacagggggcggaaccacacatgcacggcactcccgggcagggaaagtcctcgacttac gaccagtttagtcctcgacttacgaccggtttagtcctcgacttacgaccgcaattaaaacgttttgtgaggccacaagt tttccaaggtgttgctggagttgtgttaataaccacaggtgtgtgtgttcaagtgaaactccattatgcttttgtggtac tgaatgaagctgcttcaggagtagctgtgaccgtaacagtcattggtgtgcttatcatcattctgtctggctttggagca attgctttattcagatcgagcaaagccatgatcaaatttttcacaggtttactcgtgttgctcttgatcaccgaaattct ggttgttgccactgcctatgcatgcagagtaaagctacaccagaccgtatccaaagatttcatgaagattctgaacaagt ataataagaaactgcagatcaccaagggggtggatattctccaggcagagtttcagtgctgtggcgcggagaactataca gactggcaaaacaccacctttggactgctctcctcatctgtccccaaaagctgctgcaaaatacctgtggaaagctgtgt tactgatctaaatgaagatacagttggcattaatcaggagggctgtcttctaaaactgaagagctggactgaaagaaaca tttctgcatttggaggacttgcagttcttatagtatttggtcaggtaactgggatcctgctttgctatattctgctgaaa ataataaacgaagactatgacaacattgaacaggcttaagaaaccggtattctttgaacaagcttaagaagccagtattc attttgtggctgcaaaactgaattgaaattgaaatacaatatgtttttttttctttttgtcttgccaaatatgaagtgca ccaaataaaatgttctaaagtacaattgttg |
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| Transcript ID | habu1_s2440_g08890.t3 |
| Definition | - |
>habu1_s2440_g08890.t3 tcgaggactacccaaccggtcgtgcctttcctcccttggtctgggccagctggtagtcggcctgctccatctctgccgct tgccagctacgcctcggccggcacagggggcggaaccacacatgcacggcactcccgggcagggaaagtcctcgacttac gaccagtttagtcctcgacttacgaccggtttagtcctcgacttacgaccggttggggtcgcggcattaaaaagtcatct ggctaaatgtgtgatgttcttcaccaccaccaccacaaaaaaaaatcatgaaatcggatgtagtcacatgatctgcttaa caactggcatatgttacaactgtaatttcaaactcaattatggtttctcaagctttgtagaggtagcaagcaaaatgaaa ggagaaggaagaattacatgggagaagtgtgttaagattgctttatggctgactgttttactttattgggttgctggagt tgtgttaataaccacaggtgtgtgtgttcaagtgaaactccattatgcttttgtggtactgaatgaagctgcttcaggag tagctgtgaccgtaacagtcattggtgtgcttatcatcattctgtctggctttggagcaattgctttattcagatcgagc aaagccatgatcaaatttttcacaggtttactcgtgttgctcttgatcaccgaaattctggttgttgccactgcctatgc atgcagagtaaagctacaccagaccgtatccaaagatttcatgaagattctgaacaagtataataagaaactgcagatca ccaagggggtggatattctccaggcagagtttcagtgctgtggcgcggagaactatacagactggcaaaacaccaccttt ggactgctctcctcatctgtccccaaaagctgctgcaaaatacctgtggaaagctgtgttactgatctaaatgaagatac agttggcattaatcaggagggctgtcttctaaaactgaagagctggactgaaagaaacatttctgcatttggaggacttg cagttcttatagtatttggtcaggtaactgggatcctgctttgctatattctgctgaaaataataaacgaagactatgac aacattgaacaggcttaagaaaccggtattctttgaacaagcttaagaagccagtattcattttgtggctgcaaaactga attgaaattgaaatacaatatgtttttttttctttttgtcttgccaaatatgaagtgcaccaaataaaatgttctaaagt acaattgttg |
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Protein
| Protein ID | habu1_s2440_g08890.t1 |
|---|---|
| Definition | - |
>habu1_s2440_g08890.t1 MHGTPGQGKSSTYDQFSPRLTTGLVLDLRPQLKRFVRPQVFQGVAGVVLITTGVCVQVKLHYAFVVLNEAASGVAVTVTV IGVLIIILSGFGAIALFRSSKAMIKFFTGLLVLLLITEILVVATAYACRVKLHQTVSKDFMKILNKYNKKLQITKGVDIL QAEFQCCGAENYTDWQNTTFGLLSSSVPKSCCKIPVESCVTDLNEDTVGINQEGCLLKLKSWTERNISAFGGLAVLIVFG QVTGILLCYILLKIINEDYDNIEQA |
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| Protein ID | habu1_s2440_g08890.t2 |
| Definition | - |
>habu1_s2440_g08890.t2 MHGTPGQGKSSTYDQFSPRLTTGLVLDLRPQLKRFVRPQVFQGVAGVVLITTGVCVQVKLHYAFVVLNEAASGVAVTVTV IGVLIIILSGFGAIALFRSSKAMIKFFTGLLVLLLITEILVVATAYACRVKLHQTVSKDFMKILNKYNKKLQITKGVDIL QAEFQCCGAENYTDWQNTTFGLLSSSVPKSCCKIPVESCVTDLNEDTVGINQEGCLLKLKSWTERNISAFGGLAVLIVFG QVTGILLCYILLKIINEDYDNIEQA |
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| Protein ID | habu1_s2440_g08890.t3 |
| Definition | - |
>habu1_s2440_g08890.t3 MHGTPGQGKSSTYDQFSPRLTTGLVLDLRPVGVAALKSHLAKCVMFFTTTTTKKNHEIGCSHMICLTTGICYNCNFKLNY GFSSFVEVASKMKGEGRITWEKCVKIALWLTVLLYWVAGVVLITTGVCVQVKLHYAFVVLNEAASGVAVTVTVIGVLIII LSGFGAIALFRSSKAMIKFFTGLLVLLLITEILVVATAYACRVKLHQTVSKDFMKILNKYNKKLQITKGVDILQAEFQCC GAENYTDWQNTTFGLLSSSVPKSCCKIPVESCVTDLNEDTVGINQEGCLLKLKSWTERNISAFGGLAVLIVFGQVTGILL CYILLKIINEDYDNIEQA |
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