Gene
| Gene Model ID | habu1_s2440_g08895 |
|---|---|
| Locus | habu1_scaffold2440 : 825453 ... 833311 : + |
| To GenomeBrowser | habu1_scaffold2440:825453..833311 |
| Genes list of scaffold | habu1_scaffold2440 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| uridine 5 -monophosphate synthase | EC:2.4.2.10 EC:4.1.1.23 GO:0004588 GO:0004590 GO:0004672 GO:0005089 GO:0005524 GO:0006207 GO:0006468 GO:0043087 GO:0044205 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2440_g08895.t1 | 1 | 1 | Pribosyltran | 37 | 145 | 1.6e-11 | 43.9 | 9.4e-15 | 4.6e-11 | 42.5 |
| habu1_s2440_g08895.t1 | 1 | 1 | OMPdecase | 244 | 458 | 0.0 | 253.2 | 0.0 | 0.0 | 252.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2440_g08895.t1 | gi|602646524|ref|XP_007429693.1| | PREDICTED: uridine 5'-monophosphate synthase [Python bivittatus] | 0.0 |
| habu1_s2440_g08895.t1 | gi|327260221|ref|XP_003214933.1| | PREDICTED: uridine 5'-monophosphate synthase [Anolis carolinensis] | 0.0 |
| habu1_s2440_g08895.t1 | gi|327291149|ref|XP_003230284.1| | PREDICTED: uridine 5'-monophosphate synthase isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s2440_g08895.t1 | gi|530566683|ref|XP_005279879.1| | PREDICTED: uridine 5'-monophosphate synthase [Chrysemys picta bellii] | 0.0 |
| habu1_s2440_g08895.t1 | gi|696963681|ref|XP_009569823.1| | PREDICTED: uridine 5'-monophosphate synthase [Cuculus canorus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.3 |
| Venom grand-1 | 4.9 |
| Pit, infrared sensing | 5.5 |
| Nose | 4.6 |
| Brain-1 | 3.2 |
| Eye | 3.3 |
| fetal fibroblast | 12.5 |
| venom gland-2 | 6.3 |
| Brain-2 | 3.1 |
| Spleen | 4.6 |
| Lung | 3.8 |
| Liver | 9.9 |
| Kidney | 9.2 |
| Pancreas | 4.3 |
| Small intestine | 4.5 |
| Large intestine | 4.0 |
| Stomach | 4.7 |
| heart | 3.6 |
| ovary | 1.9 |
| cheek muscle | 8.4 |
Transcript
| Transcript ID | habu1_s2440_g08895.t1 |
|---|---|
| Definition | - |
>habu1_s2440_g08895.t1 ttcgcgcgcgtggtacgaggaaagcgaaaagcgccatggagtcgttggcgactgagctgtacggagttcaggctctgcgc ttcggggagttcgtcctgaagagcggcctggtctccccggtctatattgacctccgcgtcattgtgtcgtatccggcgct gctaaataaggtagcagatctccttttctgttcagcgaaggatgccgcactcaagtatgattccgtgtgtggagttccat acacagctttgcccttggctacaataatctgctcaacaaataaggttccaatgcttatacggagaaaagaagccaaagat catggaaccaagcgccttgtggagggcacaattaattcaggagaaacttgcctgattatcgaggatgtagtaaccagcgg ttcaagtgtcttggagacggcagaggtcctttggaaagagggattgaaggttactgatgccattgtgctgttggacagag aacaaggagggaaagccatgttggaaaaacatggaattaggctgcactccgtgtgcagcttgtctcaaattcttcaaatc cttgaacagcagaaaaaaattacttctgaaacagtagtaagagtggaaaaattcatccaagacaatatttttaagccatc tgaacaaaatggtaccgctcctgtgaaaagggtatgcaaagaaatgagttacgctgctcgggctgagctgccaggcactc atcctctggctgctcgacttctcaagcttatggagaaaaaacagtctaacttgtgcctttctgctgatgtgaacagttcc aaagaattgcttcagctggctgacagtctgggaccatccatctgcattttgaaaactcacattgatattctggatgattt tacccaggaagtagttaaagaactgagtgtacttgcttctcggcatgaattcttgatttttgaagaccgaaaatttgcag acattggaaatacggtgaagcaccagtacaaaggcggtgttttcaaaatagcatcatggtcagatatggttaatgcccat gcagttcctggcccaggagttattaaagggctgaaagaagtggggcatcctttacaacgtgggtgtctcttggttggtga gatgagctccagtgagtccctggccacaggtgactatacgaaagctgttgtcagaatggctgaagatcactcagattttg ttctgggatttatttctgggtccaaaattactgaaaaacctgaatttcttcatttaactccaggggtccagatgcaagct ggaggtgatagccttgggcagaagtacctaagtccacaagacgttatcagaaaacgaaagtcagacatcatcattgtggg acgaggcatcttatctgcatcagaccgccaggctgaagcagaggcgtataggaaactagcctgggaaagttacttgcaga ggattggtgtttgtcctcaaagttagctaagttggcttccactaaacaagccactccaagaagctagcacaattaagaag ataaatgtgttttgcccgccaaatatttttgtatgttaaaataaatttgccactgaaggatttggaagctgctacacaaa taatagctatggcacttcttgacattgaaatcaagaatcagatgttgtattaaggtgattctggaattctacccttgcat ttttagtaaaaattaaaaaaaaaaaacattcccaggcttttaaaacaacatcattgggtttgaaaacatcagtgatataa aaatggagagaagtcagaaaacaagatataccttcatatagcatatgcacttatcagttcttaattgttttctgtattat aataagaggagtctccctagagggtgggcatttcagtcacatctgaaacaagcttgaaagtcttgtgttggtgagagagc tggctgttttagtataattaagacacttgttaatattttagcaaatgctttgctaatgtagagatagcttaaatacctca ggttacattcagaaaatgtatttctcctgttgataattatctggaatgtgagatgtatgaacatcttgtacaatattaat tttaaatgtgaacatattaatacatcagtggttttatatgaggagggtagaataatatgtatgttgtcttacataaaaga gtgcatttattaatgttaggggtcttatgaaatatttgcagtataaatgaggtattagtgcaaatgtgatgttttttctt ccgaaatggtctagaattctcaaggacttgttttaaccaactacaggggttttttttttctcccttattcagttctgtca tccaattcttctacaaaagtccttacatgtttcgaatgagccaaaaattgattctgatgcataaaagaccttttataatg ttatggttctgatttaaacattttaaactgatataatttttaaagtatgtgaataaaatagtacttatttcataaatgc |
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Protein
| Protein ID | habu1_s2440_g08895.t1 |
|---|---|
| Definition | - |
>habu1_s2440_g08895.t1 MESLATELYGVQALRFGEFVLKSGLVSPVYIDLRVIVSYPALLNKVADLLFCSAKDAALKYDSVCGVPYTALPLATIICS TNKVPMLIRRKEAKDHGTKRLVEGTINSGETCLIIEDVVTSGSSVLETAEVLWKEGLKVTDAIVLLDREQGGKAMLEKHG IRLHSVCSLSQILQILEQQKKITSETVVRVEKFIQDNIFKPSEQNGTAPVKRVCKEMSYAARAELPGTHPLAARLLKLME KKQSNLCLSADVNSSKELLQLADSLGPSICILKTHIDILDDFTQEVVKELSVLASRHEFLIFEDRKFADIGNTVKHQYKG GVFKIASWSDMVNAHAVPGPGVIKGLKEVGHPLQRGCLLVGEMSSSESLATGDYTKAVVRMAEDHSDFVLGFISGSKITE KPEFLHLTPGVQMQAGGDSLGQKYLSPQDVIRKRKSDIIIVGRGILSASDRQAEAEAYRKLAWESYLQRIGVCPQS |
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