Gene
| Gene Model ID | habu1_s2447_g08959 |
|---|---|
| Locus | habu1_scaffold2447 : 249336 ... 445542 : + |
| To GenomeBrowser | habu1_scaffold2447:249336..445542 |
| Genes list of scaffold | habu1_scaffold2447 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| matrix metalloproteinase-16 isoform x1 | EC:3.4.24.0 GO:0001958 GO:0004222 GO:0005509 GO:0006508 GO:0008270 GO:0030574 GO:0031012 GO:0035988 GO:0048701 GO:0097094 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2447_g08959.t2 | 1 | 1 | RVT_1 | 152 | 421 | 1.3e-31 | 109.6 | 1.4e-34 | 2.4e-31 | 108.7 |
| habu1_s2447_g08959.t2 | 1 | 1 | PG_binding_1 | 488 | 535 | 3.2e-09 | 36.6 | 9.4e-12 | 1.5e-08 | 34.4 |
| habu1_s2447_g08959.t2 | 1 | 1 | Peptidase_M10 | 573 | 738 | 0.0 | 195.3 | 0.0 | 0.0 | 194.4 |
| habu1_s2447_g08959.t2 | 4 | 1 | Hemopexin | 803 | 838 | 0.0 | 172.8 | 4.4e-14 | 7.2e-11 | 41.6 |
| habu1_s2447_g08959.t2 | 4 | 2 | Hemopexin | 840 | 883 | 0.0 | 172.8 | 6.7e-14 | 1.1e-10 | 41.0 |
| habu1_s2447_g08959.t2 | 4 | 3 | Hemopexin | 887 | 932 | 0.0 | 172.8 | 2.9e-17 | 4.7e-14 | 51.8 |
| habu1_s2447_g08959.t2 | 4 | 4 | Hemopexin | 937 | 980 | 0.0 | 172.8 | 1.0e-15 | 1.6e-12 | 46.8 |
| habu1_s2447_g08959.t2 | 1 | 1 | DUF3377 | 983 | 1053 | 4.5e-35 | 119.1 | 6.2e-38 | 1.0e-34 | 117.9 |
| habu1_s2447_g08959.t2 | 1 | 1 | DDE_3 | 1272 | 1327 | 8.7e-12 | 45.0 | 5.0e-14 | 8.2e-11 | 41.8 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.1 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 0.3 |
| Nose | 0.2 |
| Brain-1 | 0.8 |
| Eye | 0.2 |
| fetal fibroblast | 0.9 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.7 |
| Spleen | 0.3 |
| Lung | 0.3 |
| Liver | 0.1 |
| Kidney | 0.1 |
| Pancreas | 0.0 |
| Small intestine | 0.1 |
| Large intestine | 0.1 |
| Stomach | 0.1 |
| heart | 0.1 |
| ovary | 0.1 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s2447_g08959.t1 |
|---|---|
| Definition | - |
>habu1_s2447_g08959.t1 agtcgaggactttccctgcccgggagcgccgtgcatgtgtgggtccgccccctgcgccggccgaggcgtagctggcaagc ggcagagatggagcaggccgaccaccagctggcccagcccaagggagcactgcaagccggggggatttcgtgcatcaatc cagggtcctcttcttgcaagccttgctttggattttatgtgccaccggatgccgagcagagcagtattttaatgtggagt aagtggaccactaattacatggctatctgtgagtggaagcaggatgaggaaaagcaaaacaatctgtctgatttcgaagt cgtctcctccctggatattggctctctcaccagcagcccccctggaggagagtcgcccccgagcatggcccacctggagc atggcagccgggacatggcagctgggcagcggagacaagactctgccctcacgccccatcgcacacaagtgatgctgtgg ggttccatccctcaggaactgaaagacgcgtccatcgtgcacctctacaagaggaaaggaaatcgacacgtctgcgataa ttatagagaaatatcacttctctccgtcgcaggcaagatctttgcacgagtgttgctaaatcgcctgattgaccatctgg aacagggtctactacctgagacacagtgtagtttccgcaaagagcgtggcacggtggacatgatctttgcagctcgacag ctccaggagaaatgtcaggagcagaatcgtgaactatataccacttttgtggatctcaccaaggcttttgacacagttag ttgtgaaggattatggcacattatgtcgaagtttgggtgccctgacagatttattctgatggtacggcagttccatgatg gcatggcgggtcgtgttctgagcaacggtgaagcctcagaggctttccctgtcacaaacggcgttaagcaaggctgcgta ctgacaccaaccttgttcagcatgatgttttcagccatgctgtctgacgcctttcagaacagctcagtgggagtcaatct gaggtacagaaccgatgggaaattgttcaacctgcgaagactccaggctgtcaccaaggtaaaggagactgtgctacgag atcttctctttgctgatgactgtgcccttaatgcaggatcggagcaggaagtgcaagccagcatggacaaattcgcagtt gtttgtgacaactttggcctctttatcaacacgaagaaaactgaagtgatgtaccagccagttccaaaagcccaatacca agagcctaccatcacagtgaagggacaaaagctgcaagcagtggaccaatttacgtatcttggtagtaccctctcccgtg cagtaacaattgacatcgaggtcaactgtagaattgccaaggcaagttctgcatttggcagactgcggactaacgtgtgg gagcgccgtggaataagccttgctactaagcttaaagtttaccaggcagcagtgctaactaccctaatgtatgctagtga gacctggacagtgtacaggaggcacgtgtggttacaaaaatacggctatcttccatccgctgattccagaatgtcagtat tgcgcactgcagagacaatgaaatctgctatagctgccatgcagcagttctatggcattaacacgacaggaaaagtggac agaaacacaatcgatgatatcaccttaagctggatgaagaagcctcgttgtggagttcctgatcagatgagaggcaactc tagatttaacattcgtcgaaagcgatatgcattaacagggcagaagtggcaacacaaatatatcacttacagcataaaga atgtcactccaaaagtaggagatgctgaaacccgtaaagctattcgacgtgccttcgatgtgtggcagaatgtaacccct ctgacatttgaggaagttccttatgtagaactggagaatggcaagaaagatgtggatattactataatttttgcatcagg ttttcatggagacagttctccattcgatggggaaggaggatttttggctcatgcttattttcctgggccaggaattggag gtgatactcattttgactcagatgagccatggactttgggaaatcccaatcatgatggaaatgatttgttcctagtggca gttcatgaactgggacatgcccttggattggagcattcaaacgatccgactgccattatggctccattttaccagtatat ggaaactgacaatttcaaactacctaatgatgatttgcagggaatccaaaagatatacggtccacctgacagaatcccac caccaacaagacccttgccgacagtacctccacatcgttctgtccctccagctgatcctaggaagaatgacagggctaaa gctccccggccacccacaggggataagccctcctaccctggggtcaaacccaatatctgtgatggaaatttcaatactct agccatcctccgccacgaaatgtttgttttcaaggatcagtggttttggcgagtcagaaataacagggtgatggatggat accccatgcagattacctacttctggagggggctgcctccaagcattgatgcagtttatgaaaacagtgatggaaacttc gttttctttaaagtggacaaaattatgacaccttacaaccacatgatgaacttttctccttccatctgaaagaacccaac aaatatcagttattgttccaaagtttggaagatcaaagtttcatataggtgagaagcaggaatcatgtgccaccccatca ccatgctgtttcatctgccatctccagaattagttgttttgagcattagttatttgtcttgcttttcatgtaatctgtgt tactcagtgatttatctgccattactaattcaggtgggaaatgaagtattaacaatgttcctgttctcatgcaaatttct ttcgtaattaaaaatttcataaagaccaaaaatatggcatgtgcaatgcagggttttgtatttctctccccaccctcagt ttttcaccaggcatcagctgttgcctaaaattaaaactttaaatatgcatctaatttgagtttaatgtgaaaattataca ttctactgaataaatactagtttatcattacaacct |
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| Transcript ID | habu1_s2447_g08959.t2 |
| Definition | - |
>habu1_s2447_g08959.t2 agtcgaggactttccctgcccgggagcgccgtgcatgtgtgggtccgccccctgcgccggccgaggcgtagctggcaagc ggcagagatggagcaggccgaccaccagctggcccagcccaagggagcactgcaagccggggggatttcgtgcatcaatc cagggtcctcttcttgcaagccttgctttggattttatgtgccaccggatgccgagcagagcagtattttaatgtggagt aagtggaccactaattacatggctatctgtgagtggaagcaggatgaggaaaagcaaaacaatctgtctgatttcgaagt cgtctcctccctggatattggctctctcaccagcagcccccctggaggagagtcgcccccgagcatggcccacctggagc atggcagccgggacatggcagctgggcagcggagacaagactctgccctcacgccccatcgcacacaagtgatgctgtgg ggttccatccctcaggaactgaaagacgcgtccatcgtgcacctctacaagaggaaaggaaatcgacacgtctgcgataa ttatagagaaatatcacttctctccgtcgcaggcaagatctttgcacgagtgttgctaaatcgcctgattgaccatctgg aacagggtctactacctgagacacagtgtagtttccgcaaagagcgtggcacggtggacatgatctttgcagctcgacag ctccaggagaaatgtcaggagcagaatcgtgaactatataccacttttgtggatctcaccaaggcttttgacacagttag ttgtgaaggattatggcacattatgtcgaagtttgggtgccctgacagatttattctgatggtacggcagttccatgatg gcatggcgggtcgtgttctgagcaacggtgaagcctcagaggctttccctgtcacaaacggcgttaagcaaggctgcgta ctgacaccaaccttgttcagcatgatgttttcagccatgctgtctgacgcctttcagaacagctcagtgggagtcaatct gaggtacagaaccgatgggaaattgttcaacctgcgaagactccaggctgtcaccaaggtaaaggagactgtgctacgag atcttctctttgctgatgactgtgcccttaatgcaggatcggagcaggaagtgcaagccagcatggacaaattcgcagtt gtttgtgacaactttggcctctttatcaacacgaagaaaactgaagtgatgtaccagccagttccaaaagcccaatacca agagcctaccatcacagtgaagggacaaaagctgcaagcagtggaccaatttacgtatcttggtagtaccctctcccgtg cagtaacaattgacatcgaggtcaactgtagaattgccaaggcaagttctgcatttggcagactgcggactaacgtgtgg gagcgccgtggaataagccttgctactaagcttaaagtttaccaggcagcagtgctaactaccctaatgtatgctagtga gacctggacagtgtacaggaggcacgtgtggttacaaaaatacggctatcttccatccgctgattccagaatgtcagtat tgcgcactgcagagacaatgaaatctgctatagctgccatgcagcagttctatggcattaacacgacaggaaaagtggac agaaacacaatcgatgatatcaccttaagctggatgaagaagcctcgttgtggagttcctgatcagatgagaggcaactc tagatttaacattcgtcgaaagcgatatgcattaacagggcagaagtggcaacacaaatatatcacttacagcataaaga atgtcactccaaaagtaggagatgctgaaacccgtaaagctattcgacgtgccttcgatgtgtggcagaatgtaacccct ctgacatttgaggaagttccttatgtagaactggagaatggcaagaaagatgtggatattactataatttttgcatcagg ttttcatggagacagttctccattcgatggggaaggaggatttttggctcatgcttattttcctgggccaggaattggag gtgatactcattttgactcagatgagccatggactttgggaaatcccaatcatgatggaaatgatttgttcctagtggca gttcatgaactgggacatgcccttggattggagcattcaaacgatccgactgccattatggctccattttaccagtatat ggaaactgacaatttcaaactacctaatgatgatttgcagggaatccaaaagatatacggtccacctgacagaatcccac caccaacaagacccttgccgacagtacctccacatcgttctgtccctccagctgatcctaggaagaatgacagggctaaa gctccccggccacccacaggggataagccctcctaccctggggtcaaacccaatatctgtgatggaaatttcaatactct agccatcctccgccacgaaatgtttgttttcaaggatcagtggttttggcgagtcagaaataacagggtgatggatggat accccatgcagattacctacttctggagggggctgcctccaagcattgatgcagtttatgaaaacagtgatggaaacttc gttttctttaaaggtaacaagttctggatctttaaggacaccaccctccagccagggtatcctcatgatttaatatcatt aggaagtgggattcctcctcatggtattgattcagcaatttggtgggaggatgttgggaaaacctacttcttcaaaggag acaggtattggagatacagtgaagatataagaactatggacacaggttatcccaaatcaatcacaatctggaaaggtatc ccagaatcacctcagggagcctttgttcacaaagaaaatggcttcacgtatttctacaaaggcaaagaatactggaaatt caacaatcaaatgctccgggtggaaccgggatatcccagatctatcctcaaggattttatgggctgtgatggaccagcag accgggacaaagagcgacacagccctcaagatgatgtagacattgtcatcaaactggacaacacagccagcactgtgaaa gctatagccattgtcattccttgcatactggccctgtgcctccttgtcttggtttacactgtgttccaattcaagaggaa aggaacaccccgccacatactttactgcaaacgctctatgcaagaggcccaggattcagactctgcttctgactccaaag aaactgttccagctgaaccagtagaaccagtcagccttaggaaacatcaagccaggagccacatgaggctgattaaacat aggcaccttcagaacaattgatgggtgaaaatgtctgtgcgtcttatggagcgaatgccgcctcccaaccacggcgccgc ggcctcccaaccgcggcctcccaaccgccgcggcagtggcgcggcctcccaaccgccgcggcggcacggcctcccaaccg ccgcggcggtggcacggcctcccaactgccgcggcagcgctgcggcctcccaaccgcggtgccgcggcctcccaaccgcc gcgccgcggcctcccaaccgcttgcttcttcggctgcctcctgtcctgctccccctccccacccgttcggaaagagaaag agaagagaaagagagagacagagagacccttttgacatctaaaatgaagagaactctgcatacgctgctcctgaacaaca aacaatgtcagaagcgtcttacctgggctaaagaaaaacagaactggtctgttgctcagtggtccaaagtcctcttttct gatgagagcaacttttgcatctcatttgggaaccaaggacccagcgtctggaggaagaatggagaggcacacactgccaa aagcaccaaaacctggttcaatgaccgtgggattactgtgctcgattggccagcaaactcgcctgacctgaaccccatag agaatctatggggcattgccaagagaaagatgagagacatgagaccgaacaatgcagaagagctgaaggccgctattgaa gcatcctggtcttccataacacctcagcagtgccataggctgatagcttccatgccacgccgcattgagacagtaattgc tgcaaaaggggcccaaaccaagtactgagtacatatgcatgcttatacgtttcagaggtccgatgttgttctatgtacaa tccttgttttattgattgcatgtaatattctaattttctgagattgtggatttggggttttcatgagctgtaagccataa tcatcacaattatgacaaatcacagcttgcactatcttgctttgcatgtaatgagtctatctcatatattaggttcacct tttaagttgcattactgaaataaatgaacttttgcacaatagtcta |
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Protein
| Protein ID | habu1_s2447_g08959.t1 |
|---|---|
| Definition | - |
>habu1_s2447_g08959.t1 MEQADHQLAQPKGALQAGGISCINPGSSSCKPCFGFYVPPDAEQSSILMWSKWTTNYMAICEWKQDEEKQNNLSDFEVVS SLDIGSLTSSPPGGESPPSMAHLEHGSRDMAAGQRRQDSALTPHRTQVMLWGSIPQELKDASIVHLYKRKGNRHVCDNYR EISLLSVAGKIFARVLLNRLIDHLEQGLLPETQCSFRKERGTVDMIFAARQLQEKCQEQNRELYTTFVDLTKAFDTVSCE GLWHIMSKFGCPDRFILMVRQFHDGMAGRVLSNGEASEAFPVTNGVKQGCVLTPTLFSMMFSAMLSDAFQNSSVGVNLRY RTDGKLFNLRRLQAVTKVKETVLRDLLFADDCALNAGSEQEVQASMDKFAVVCDNFGLFINTKKTEVMYQPVPKAQYQEP TITVKGQKLQAVDQFTYLGSTLSRAVTIDIEVNCRIAKASSAFGRLRTNVWERRGISLATKLKVYQAAVLTTLMYASETW TVYRRHVWLQKYGYLPSADSRMSVLRTAETMKSAIAAMQQFYGINTTGKVDRNTIDDITLSWMKKPRCGVPDQMRGNSRF NIRRKRYALTGQKWQHKYITYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYVELENGKKDVDITIIFASGFH GDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMET DNFKLPNDDLQGIQKIYGPPDRIPPPTRPLPTVPPHRSVPPADPRKNDRAKAPRPPTGDKPSYPGVKPNICDGNFNTLAI LRHEMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKVDKIMTPYNHMMNFSPSI |
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| Protein ID | habu1_s2447_g08959.t2 |
| Definition | - |
>habu1_s2447_g08959.t2 MEQADHQLAQPKGALQAGGISCINPGSSSCKPCFGFYVPPDAEQSSILMWSKWTTNYMAICEWKQDEEKQNNLSDFEVVS SLDIGSLTSSPPGGESPPSMAHLEHGSRDMAAGQRRQDSALTPHRTQVMLWGSIPQELKDASIVHLYKRKGNRHVCDNYR EISLLSVAGKIFARVLLNRLIDHLEQGLLPETQCSFRKERGTVDMIFAARQLQEKCQEQNRELYTTFVDLTKAFDTVSCE GLWHIMSKFGCPDRFILMVRQFHDGMAGRVLSNGEASEAFPVTNGVKQGCVLTPTLFSMMFSAMLSDAFQNSSVGVNLRY RTDGKLFNLRRLQAVTKVKETVLRDLLFADDCALNAGSEQEVQASMDKFAVVCDNFGLFINTKKTEVMYQPVPKAQYQEP TITVKGQKLQAVDQFTYLGSTLSRAVTIDIEVNCRIAKASSAFGRLRTNVWERRGISLATKLKVYQAAVLTTLMYASETW TVYRRHVWLQKYGYLPSADSRMSVLRTAETMKSAIAAMQQFYGINTTGKVDRNTIDDITLSWMKKPRCGVPDQMRGNSRF NIRRKRYALTGQKWQHKYITYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYVELENGKKDVDITIIFASGFH GDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMET DNFKLPNDDLQGIQKIYGPPDRIPPPTRPLPTVPPHRSVPPADPRKNDRAKAPRPPTGDKPSYPGVKPNICDGNFNTLAI LRHEMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKFWIFKDTTLQPGYPHDLISLGS GIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEDIRTMDTGYPKSITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNN QMLRVEPGYPRSILKDFMGCDGPADRDKERHSPQDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGT PRHILYCKRSMQEAQDSDSASDSKETVPAEPVEPVSLRKHQARSHMRLIKHRHLQNNXWVKMSVRLMERMPPPNHGAAAS QPRPPNRRGSGAASQPPRRHGLPTAAAVARPPNCRGSAAASQPRCRGLPTAAPRPPNRLLLRLPPVLLPLPTRSEREREE KERDRETLLTSKMKRTLHTLLLNNKQCQKRLTWAKEKQNWSVAQWSKVLFSDESNFCISFGNQGPSVWRKNGEAHTAKST KTWFNDRGITVLDWPANSPDLNPIENLWGIAKRKMRDMRPNNAEELKAAIEASWSSITPQQCHRLIASMPRRIETVIAAK GAQTKY |
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