Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2447_g08961
Locus habu1_scaffold2447 : 704332 ... 773150 : +
To GenomeBrowser habu1_scaffold2447:704332..773150
Genes list of scaffold habu1_scaffold2447

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s2447_g08961.t3 1 1 cNMP_binding 537 634 3.0e-10 39.7 1.7e-13 1.3e-09 37.7

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 0.0
Pit, infrared sensing 0.1
Nose 0.0
Brain-1 0.0
Eye 9.6
fetal fibroblast 0.0
venom gland-2 0.1
Brain-2 0.0
Spleen 0.0
Lung 0.0
Liver 0.0
Kidney 0.0
Pancreas 0.0
Small intestine 0.0
Large intestine 0.0
Stomach 0.0
heart 0.1
ovary 0.0
cheek muscle 0.0

Transcript
Transcript IDhabu1_s2447_g08961.t1
Definition-
>habu1_s2447_g08961.t1
cttatcttgttgtttttttaactctaaaatgtcaaagcacattttcaggataaatctataagcaatgccacaattaaaag
aaaaataaaaaagaaactatgccaagaaaagcaatcacttggataggctgtctttgcaggagattatgacgtactctaca
aaactaaaccctgattaaacatctaattggtttgaataatactggccagaaaagttaaatgcctttagcatttaattaca
aatgaccacagtttttacagatctctgtgaacaaatatgttcagtaaattaaaaggaaaattcaccaaagtgctacccaa
accagcagaggaaaatgtgaacgagaattctctagaaccatcatcacagccttcactggaaaaaaataagaaaaatgatg
ttgaaaatgggaacttgaaaaaagaagaaaacatggcacaatcagtctccaagcaacaaaatgaaggaagaactccagaa
cgaggacttgagctttctaaggctgaacaaccaatggcatcaaaggaaccaactcagaaggatgaggcacagccagacag
ggggaagggagagaccacagtcccagaaaataaaccaccggaagtcattatcaatgaatatgcacaaatacagctgcaag
acatggtccaaaaaatgcgagaaagaacagctacttataaggaaaaggtgactaatccagtaatctcttcacctgaagtc
agtccaactgcatcaccccaaaagcagcccccaccctctgctgccaaagaagaaaaaaaagaggaaaaaaaagaagaaag
taaatctgaggagaagccaagttctacagtaaagaagcgatccatgaaagaatatatgaaaaaatttaaactgccagaaa
ccatagatgcattcacagatcgtcgctatataatgtggttattcttagttactgttgcttataactggaactgctggttc
atcccactgcgattagtattcccagttcaaacatcaagcaacacagtatactggattgctgtagacatcttaagtgacat
ctgctacatctgtgatctcttgttatttcagcctcgagtacaatttgtgaaagggggagatataataacagataaagtag
aaataaaaaagtcctaccggaattcattaaaatttcggcatctcacattctttgaattcaatgacaagttagaggcagtg
atggataaagcatatatctacagggtcattcgaactattggatacctattgtttatcttgcatattaatgcatgcttata
ctactgggcttcaacgtatcaaggacttgggagtaccaaatgggtgtatgatggcaaaggaaacatgtatctaagatgtt
actactgggctgttcgcactttgattactattggtggactaccagaaccagtcactttgtttgaaataatctttcagctt
atgaattatttctcaggcgtctttgtattctccggtttgattggccagatgcgtgatattattggagcagcaacagcagg
acaaaactattatcgtgcctgtatggatgacacagttgattacatgaatactaatactattccatgggttgttcagaatc
gtattcgaacatggtatgagtatacgtgggattcacaaggaatgctagatgaatcagaattactggagcaaatgcctgga
aaaatgcagttagacattgcaactgatgtcaattttgctattgtccgcaaaattgatttgttcaaagaatgtgactccca
aatgatatgcgacatgctgctgagattgaaatccgttgtgtatttacctggcgattttgtgtgcaaaaagggagaaattg
gtagagaaatgtatatcattaaacaaggtgaagttcaagtacttggaggtcctgatggcactaaagtcctggtcaccctg
agagcaggagctgtatttggagaaatcagtctattagcagacagtggaggaaatcggcgaactgcgaatgtgatcgctca
tggatttgccaatctttttattcttgacaagaagacattgaatgaaatcctggtgtcctatcctgaatctgaaaggcact
tgagaaagaaggggaaagcacttatgaagaaggcaggaaaacctgctggaccaccaccaccatctgtaaagggcctagct
ctacttatggctaaagcggaagcgcctaagatgctcaaagcattaactggagggaaaggaggaattttagcagtaattaa
cagggtgaagaaagagaatgaggccttgaaagaacttgaagccaaagaagaacaagcaaagaaagagaatgaggaaaaag
aaaaggcagaaaaaaagaagacagaaaatgtcaaaccaagtctacaggaaaaaaaaccagctcaagagcccatggttaaa
atccaagaaaccaaagcagagtcaagtgctcctaaagaagaggcagtcacacaaagttcaccacaaccatcactgctcaa
aggcatcaataaacagtcccttgtcattagcatgactccttcaaatgtatcaggggaaggagagatccttactgttgaag
tcaaagacaaaaaagcaacataaccagtggatgtttttactgcatatacgtgacatctcaagcactgtgcagctctcaga
ttatcttcttgttcaaaagtgtagctcatctcaggtttctttgtatgttccacaaacataaataaaaaggctagtggaga
gttagtggtactgcgttcattgtaagttataaggagaataccaactatatgtcctcaaaaataatttgaaagtacaaaat
ttgatcattgtcctgctgattactggtcaaataatttgcaatctttacacctcattctctagttcaggatggctggctgg
tttaaaatataacctaatactaatttatacttatttggggttgttcagactcaagagctgaagcagaaatgaccatgttt
ctggatttttatatgctgggtctttcagtgacccagtcaggtgcatgctgccctttgcactttgcaaatgtatgctgcaa
atctacctttttaaaaataaatatctgatttttaaaaaaataa
Transcript IDhabu1_s2447_g08961.t2
Definition-
>habu1_s2447_g08961.t2
cttatcttgttgtttttttaactctaaaatgtcaaagcacattttcaggataaatctataagcaatgccacaattaaaag
aaaaataaaaaagaaactatgccaagaaaagcaatcacttggataggctgtctttgcaggagattatgacgtactctaca
aaactaaaccctgattaaacatctaattggtttgaataatactggccagaaaagttaaatgcctttagcatttaattaca
aatgaccacagtttttacagatctctgtgaacaaatatgttcagtaaattaaaaggaaaattcaccaaagtgctacccaa
accagcagaggaaaatgtgaacgagaattctctagaaccatcatcacagccttcactggaaaaaaataagaaaaatgatg
ttgaaaatgggaacttgaaaaaagaagaaaacatggcacaatcagtctccaagcaacaaaatgaaggaagaactccagaa
cgaggacttgagctttctaaggctgaacaaccaatggcatcaaaggaaccaactcagaaggatgaggcacagccagacag
ggggaagggagagaccacagtcccagaaaataaaccaccggaagtcattatcaatgaatatgcacaaatacagctgcaag
acatggtccaaaaaatgcgagaaagaacagctacttataaggaaaaggtgactaatccagtaatctcttcacctgaagtc
agtccaactgcatcaccccaaaagcagcccccaccctctgctgccaaagaagaaaaaaaagaggaaaaaaaagaagaaag
taaatctgaggagaagccaagttctacagtaaagaagcgatccatgaaagaatatatgaaaaaatttaaactgccagaaa
ccatagatgcattcacagatcgtcgctatataatgtggttattcttagttactgttgcttataactggaactgctggttc
atcccactgcgattagtattcccagttcaaacatcaagcaacacagtatactggattgctgtagacatcttaagtgacat
ctgctacatctgtgatctcttgttatttcagcctcgagtacaatttgtgaaagggggagatataataacagataaagtag
aaataaaaaagtcctaccggaattcattaaaatttcggcttgatttattttcagtaattccatttgatgttttatgtgtt
atatttggaatcagtgcactatttagagtaaacaggatgatgaagcatctcacattctttgaattcaatgacaagttaga
ggcagtgatggataaagcatatatctacagggtcattcgaactattggatacctattgtttatcttgcatattaatgcat
gcttatactactgggcttcaacgtatcaaggacttgggagtaccaaatgggtgtatgatggcaaaggaaacatgtatcta
agatgttactactgggctgttcgcactttgattactattggtggactaccagaaccagtcactttgtttgaaataatctt
tcagcttatgaattatttctcaggcgtctttgtattctccggtttgattggccagatgcgtgatattattggagcagcaa
cagcaggacaaaactattatcgtgcctgtatggatgacacagttgattacatgaatactaatactattccatgggttgtt
cagaatcgtattcgaacatggtatgagtatacgtgggattcacaaggaatgctagatgaatcagaattactggagcaaat
gcctggaaaaatgcagttagacattgcaactgatgtcaattttgctattgtccgcaaaattgatttgttcaaagaatgtg
actcccaaatgatatgcgacatgctgctgagattgaaatccgttgtgtatttacctggcgattttgtgtgcaaaaaggga
gaaattggtagagaaatgtatatcattaaacaaggtgaagttcaagtacttggaggtcctgatggcactaaagtcctggt
caccctgagagcaggagctgtatttggagaaatcagtctattagcagacagtggaggaaatcggcgaactgcgaatgtga
tcgctcatggatttgccaatctttttattcttgacaagaagacattgaatgaaatcctggtgtcctatcctgaatctgaa
aggcacttgagaaagaaggggaaagcacttatgaagaaggcaggaaaacctgctggaccaccaccaccatctgtaaaggg
cctagctctacttatggctaaagcggaagcgcctaagatgctcaaagcattaactggagggaaaggaggaattttagcag
taattaacagggtgaagaaagagaatgaggccttgaaagaacttgaagccaaagaagaacaagcaaagaaagagaatgag
gaaaaagaaaaggcagaaaaaaagaagacagaaaatgtcaaaccaagtctacaggaaaaaaaaccagctcaagagcccat
ggttaaaatccaagaaaccaaagcagagtcaagtgctcctaaagaagaggcagtcacacaaagttcaccacaaccatcac
tgctcaaaggcatcaataaacagtcccttgtcattagcatgactccttcaaatgtatcaggggaaggagagatccttact
gttgaagtcaaagacaaaaaagcaacataaccagtggatgtttttactgcatatacgtgacatctcaagcactgtgcagc
tctcagattatcttcttgttcaaaagtgtagctcatctcaggtttctttgtatgttccacaaacataaataaaaaggcta
gtggagagttagtggtactgcgttcattgtaagttataaggagaataccaactatatgtcctcaaaaataatttgaaagt
acaaaatttgatcattgtcctgctgattactggtcaaataatttgcaatctttacacctcattctctagttcaggatggc
tggctggtttaaaatataacctaatactaatttatacttatttggggttgttcagactcaagagctgaagcagaaatgac
catgtttctggatttttatatgctgggtctttcagtgacccagtcaggtgcatgctgccctttgcactttgcaaatgtat
gctgcaaatctacctttttaaaaataaatatctgatttttaaaaaaataa
Transcript IDhabu1_s2447_g08961.t3
Definition-
>habu1_s2447_g08961.t3
cttatcttgttgtttttttaactctaaaatgtcaaagcacattttcaggataaatctataagcaatgccacaattaaaag
aaaaataaaaaagaaactatgccaagaaaagcaatcacttggataggctgtctttgcaggagattatgacgtactctaca
aaactaaaccctgattaaacatctaattggtttgaataatactggccagaaaagttaaatgcctttagcatttaattaca
aatgaccacagtttttacagatctctgtgaacaaatatgttcagtaaattaaaaggaaaattcaccaaagtgctacccaa
accagcagaggaaaatgtgaacgagaattctctagaaccatcatcacagccttcactggaaaaaaataagaaaaatgatg
ttgaaaatgggaacttgaaaaaagaagaaaacatggcacaatcagtctccaagcaacaaaatgaaggaagaactccagaa
cgaggacttgagctttctaaggctgaacaaccaatggcatcaaaggaaccaactcagaaggatgaggcacagccagacag
ggggaagggagagaccacagtcccagaaaataaaccaccggaagtcattatcaatgaatatgcacaaatacagctgcaag
acatggtccaaaaaatgcgagaaagaacagctacttataaggaaaaggtgactaatccagtaatctcttcacctgaagtc
agtccaactgcatcaccccaaaagcagcccccaccctctgctgccaaagaagaaaaaaaagaggaaaaaaaagaagaaag
taaatctgaggagaagccaagttctacagtaaagaagcgatccatgaaagaatatatgaaaaaatttaaactgccagaaa
ccatagatgcattcacagatcgtcgctatataatgtggttattcttagttactgttgcttataactggaactgctggttc
atcccactgcgattagtattcccagttcaaacatcaagcaacacagtatactggattgctgtagacatcttaagtgacat
ctgctacatctgtgatctcttgttatttcagcctcgagtacaatttgtgaaagggggagatataataacagataaagtag
aaataaaaaagtcctaccggaattcattaaaatttcggcttgatttattttcagtaattccatttgatgttttatgtgtt
atatttggaatcagtgcactatttagagtaaacaggatgatgaagcatctcacattctttgaattcaatgacaagttaga
ggcagtgatggataaagcatatatctacagggtcattcgaactattggatacctattgtttatcttgcatattaatgcat
gcttatactactgggcttcaacgtatcaaggacttgggagtaccaaatgggtgtatgatggcaaaggaaacatgtatcta
agatgttactactgggctgttcgcactttgattactattggtggactaccagaaccagtcactttgtttgaaataatctt
tcagcttatgaattatttctcaggcgtctttgtattctccggtttgattggccagatgcgtgatattattggagcagcaa
cagcaggacaaaactattatcgtgcctgtatggatgacacagttgattacatgaatactaatactattccatgggttgtt
cagaatcgtattcgaacatggtatgagtatacgtgggattcacaaggaatgctagatgaatcagaattactggagcaaat
gcctggaaaaatgcagttagacattgcaactgatgtcaattttgctattgtccgcaaaattgatttgttcaaagaatgtg
actcccaaatgatatgcgacatgctgctgagattgaaatccgttgtgtatttacctggcgattttgtgtgcaaaaaggga
gaaattggtagagaaatgtatatcattaaacaaggtgaagttcaagtacttggaggtcctgatggcactaaagtcctggt
caccctgagagcaggagctgtatttggagaaatcagggaggaaacgtgtctgccatcacagatcaatgcaaacagtggag
gaaatcggcgaactgcgaatgtgatcgctcatggatttgccaatctttttattcttgacaagaagacattgaatgaaatc
ctggtgtcctatcctgaatctgaaaggcacttgagaaagaaggggaaagcacttatgaagaaggcaggaaaacctgctgg
accaccaccaccatctgtaaagggcctagctctacttatggctaaagcggaagcgcctaagatgctcaaagcattaactg
gagggaaaggaggaattttagcagtaattaacagggtgaagaaagagaatgaggccttgaaagaacttgaagccaaagaa
gaacaagcaaagaaagagaatgaggaaaaagaaaaggcagaaaaaaagaagacagaaaatgtcaaaccaagtctacagga
aaaaaaaccagctcaagagcccatggttaaaatccaagaaaccaaagcagagtcaagtgctcctaaagaagaggcagtca
cacaaagttcaccacaaccatcactgctcaaaggcatcaataaacagtcccttgtcattagcatgactccttcaaatgta
tcaggggaaggagagatccttactgttgaagtcaaagacaaaaaagcaacataaccagtggatgtttttactgcatatac
gtgacatctcaagcactgtgcagctctcagattatcttcttgttcaaaagtgtagctcatctcaggtttctttgtatgtt
ccacaaacataaataaaaaggctagtggagagttagtggtactgcgttcattgtaagttataaggagaataccaactata
tgtcctcaaaaataatttgaaagtacaaaatttgatcattgtcctgctgattactggtcaaataatttgcaatctttaca
cctcattctctagttcaggatggctggctggtttaaaatataacctaatactaatttatacttatttggggttgttcaga
ctcaagagctgaagcagaaatgaccatgtttctggatttttatatgctgggtctttcagtgacccagtcaggtgcatgct
gccctttgcactttgcaaatgtatgctgcaaatctacctttttaaaaataaatatctgatttttaaaaaaataa

Protein
Protein IDhabu1_s2447_g08961.t1
Definition-
>habu1_s2447_g08961.t1
MFSKLKGKFTKVLPKPAEENVNENSLEPSSQPSLEKNKKNDVENGNLKKEENMAQSVSKQQNEGRTPERGLELSKAEQPM
ASKEPTQKDEAQPDRGKGETTVPENKPPEVIINEYAQIQLQDMVQKMRERTATYKEKVTNPVISSPEVSPTASPQKQPPP
SAAKEEKKEEKKEESKSEEKPSSTVKKRSMKEYMKKFKLPETIDAFTDRRYIMWLFLVTVAYNWNCWFIPLRLVFPVQTS
SNTVYWIAVDILSDICYICDLLLFQPRVQFVKGGDIITDKVEIKKSYRNSLKFRHLTFFEFNDKLEAVMDKAYIYRVIRT
IGYLLFILHINACLYYWASTYQGLGSTKWVYDGKGNMYLRCYYWAVRTLITIGGLPEPVTLFEIIFQLMNYFSGVFVFSG
LIGQMRDIIGAATAGQNYYRACMDDTVDYMNTNTIPWVVQNRIRTWYEYTWDSQGMLDESELLEQMPGKMQLDIATDVNF
AIVRKIDLFKECDSQMICDMLLRLKSVVYLPGDFVCKKGEIGREMYIIKQGEVQVLGGPDGTKVLVTLRAGAVFGEISLL
ADSGGNRRTANVIAHGFANLFILDKKTLNEILVSYPESERHLRKKGKALMKKAGKPAGPPPPSVKGLALLMAKAEAPKML
KALTGGKGGILAVINRVKKENEALKELEAKEEQAKKENEEKEKAEKKKTENVKPSLQEKKPAQEPMVKIQETKAESSAPK
EEAVTQSSPQPSLLKGINKQSLVISMTPSNVSGEGEILTVEVKDKKAT
Protein IDhabu1_s2447_g08961.t2
Definition-
>habu1_s2447_g08961.t2
MFSKLKGKFTKVLPKPAEENVNENSLEPSSQPSLEKNKKNDVENGNLKKEENMAQSVSKQQNEGRTPERGLELSKAEQPM
ASKEPTQKDEAQPDRGKGETTVPENKPPEVIINEYAQIQLQDMVQKMRERTATYKEKVTNPVISSPEVSPTASPQKQPPP
SAAKEEKKEEKKEESKSEEKPSSTVKKRSMKEYMKKFKLPETIDAFTDRRYIMWLFLVTVAYNWNCWFIPLRLVFPVQTS
SNTVYWIAVDILSDICYICDLLLFQPRVQFVKGGDIITDKVEIKKSYRNSLKFRLDLFSVIPFDVLCVIFGISALFRVNR
MMKHLTFFEFNDKLEAVMDKAYIYRVIRTIGYLLFILHINACLYYWASTYQGLGSTKWVYDGKGNMYLRCYYWAVRTLIT
IGGLPEPVTLFEIIFQLMNYFSGVFVFSGLIGQMRDIIGAATAGQNYYRACMDDTVDYMNTNTIPWVVQNRIRTWYEYTW
DSQGMLDESELLEQMPGKMQLDIATDVNFAIVRKIDLFKECDSQMICDMLLRLKSVVYLPGDFVCKKGEIGREMYIIKQG
EVQVLGGPDGTKVLVTLRAGAVFGEISLLADSGGNRRTANVIAHGFANLFILDKKTLNEILVSYPESERHLRKKGKALMK
KAGKPAGPPPPSVKGLALLMAKAEAPKMLKALTGGKGGILAVINRVKKENEALKELEAKEEQAKKENEEKEKAEKKKTEN
VKPSLQEKKPAQEPMVKIQETKAESSAPKEEAVTQSSPQPSLLKGINKQSLVISMTPSNVSGEGEILTVEVKDKKAT
Protein IDhabu1_s2447_g08961.t3
Definition-
>habu1_s2447_g08961.t3
MFSKLKGKFTKVLPKPAEENVNENSLEPSSQPSLEKNKKNDVENGNLKKEENMAQSVSKQQNEGRTPERGLELSKAEQPM
ASKEPTQKDEAQPDRGKGETTVPENKPPEVIINEYAQIQLQDMVQKMRERTATYKEKVTNPVISSPEVSPTASPQKQPPP
SAAKEEKKEEKKEESKSEEKPSSTVKKRSMKEYMKKFKLPETIDAFTDRRYIMWLFLVTVAYNWNCWFIPLRLVFPVQTS
SNTVYWIAVDILSDICYICDLLLFQPRVQFVKGGDIITDKVEIKKSYRNSLKFRLDLFSVIPFDVLCVIFGISALFRVNR
MMKHLTFFEFNDKLEAVMDKAYIYRVIRTIGYLLFILHINACLYYWASTYQGLGSTKWVYDGKGNMYLRCYYWAVRTLIT
IGGLPEPVTLFEIIFQLMNYFSGVFVFSGLIGQMRDIIGAATAGQNYYRACMDDTVDYMNTNTIPWVVQNRIRTWYEYTW
DSQGMLDESELLEQMPGKMQLDIATDVNFAIVRKIDLFKECDSQMICDMLLRLKSVVYLPGDFVCKKGEIGREMYIIKQG
EVQVLGGPDGTKVLVTLRAGAVFGEIREETCLPSQINANSGGNRRTANVIAHGFANLFILDKKTLNEILVSYPESERHLR
KKGKALMKKAGKPAGPPPPSVKGLALLMAKAEAPKMLKALTGGKGGILAVINRVKKENEALKELEAKEEQAKKENEEKEK
AEKKKTENVKPSLQEKKPAQEPMVKIQETKAESSAPKEEAVTQSSPQPSLLKGINKQSLVISMTPSNVSGEGEILTVEVK
DKKAT

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