Gene
| Gene Model ID | habu1_s2447_g08962 |
|---|---|
| Locus | habu1_scaffold2447 : 780625 ... 801896 : - |
| To GenomeBrowser | habu1_scaffold2447:780625..801896 |
| Genes list of scaffold | habu1_scaffold2447 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| copine-3 isoform x1 | EC:2.7.11.0 GO:0004674 GO:0005829 GO:0006468 GO:0009069 GO:0044822 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2447_g08962.t2 | 2 | 1 | C2 | 13 | 98 | 5.3e-30 | 103.1 | 2.0e-15 | 9.9e-12 | 44.5 |
| habu1_s2447_g08962.t2 | 2 | 2 | C2 | 145 | 229 | 5.3e-30 | 103.1 | 4.1e-19 | 2.0e-15 | 56.3 |
| habu1_s2447_g08962.t2 | 1 | 1 | Copine | 310 | 457 | 0.0 | 202.0 | 0.0 | 0.0 | 201.0 |
| habu1_s2447_g08962.t2 | 1 | 1 | vWA-TerF-like | 376 | 514 | 2.7e-09 | 37.1 | 1.0e-12 | 5.2e-09 | 36.2 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 10.9 |
| Venom grand-1 | 7.7 |
| Pit, infrared sensing | 9.3 |
| Nose | 8.8 |
| Brain-1 | 3.4 |
| Eye | 7.1 |
| fetal fibroblast | 20.6 |
| venom gland-2 | 24.2 |
| Brain-2 | 3.2 |
| Spleen | 5.2 |
| Lung | 7.5 |
| Liver | 7.4 |
| Kidney | 7.9 |
| Pancreas | 9.0 |
| Small intestine | 7.9 |
| Large intestine | 5.9 |
| Stomach | 7.5 |
| heart | 5.4 |
| ovary | 31.7 |
| cheek muscle | 7.1 |
Transcript
| Transcript ID | habu1_s2447_g08962.t1 |
|---|---|
| Definition | - |
>habu1_s2447_g08962.t1 gccgagggataaaagacggaaaagatggcagcacagtgtgtaacaaaggtggagctgactgtttcttgtaacaatctcct ggataaagatattagctccaagtcagaccctctttgtgtgctacttcaatacacaagtggacagcagtggtatgaggttg atcgcacagaaaggatcaaaaacagtttgaaccctaaattttccaggaaattccagattgattactattttgaactagtt cagaaactcaaatttgggatttttgacattgacaatacaactgttcagctgaacgatgatgacttcttaggagaatttga atgcacactgggacagattgtttctagcaagatgcttaccagacctttattgttaagaaatggcaaacctgcaggaaaag gtgtaattatgattagtgcagaagaaataaaagacaaccgtgtagtcctacttgaagttgaagcaaggaaactggacaat aaggatttgtttggaaaatccgatccttatttggaatttcacaagcaaacatctgaaggaaaatgggtgatggtccatag aacggaagttgttaaaaataatttgaatcctgtctggaggccattcaaaatctctctcaactctttgtgttatggtgaca tggacaaagcaatcaaggttgaatgctatgactacgacaatgatggatcgcatgatctcatagggacgtttcaagctaca atgtctaaactgaaggaagcctctcgacattcaccaattgaatttgaatgcatcaatgaaaaaaagaggcagaaaaagaa aagctacaaaaactcagggattgtgagctttaaacactgtgaggtcatcacagagtgtactttccttgactacgtcatgg ggggatgccagttgaattttactgttggcattgattttactggatctaatggagatcctcgttcttcagactccttacat tacatcagccccaatggagtgaatgaatacttgtcagccatttggtctgtaggaatggtcattcaggattatgatacaga taagatgtttccagcttttgggtttggtgctcagatctccccttcatggcaggtgtcgcacgaattcccgttgaacttta acccatcgaaccccttctgcagtggggtccagggtattgtggatgcatatcgggtctgccttcctcaaataagattgtat gggcccaccaacttctctccaattatcaatcatgtagctagatttgctgctgcagcttcacagcagagaacagcctcaca atattttatactcctgataatcacggatggggtgataacagaccttgatgaaaccagatctgctattgtcagtgcctcta agcttccaatgtccatcattattgttggtgttggaggtgctgatttcagtgccatggaatttctggacagtgacagtgga gctttgagatcacgttcaggagaagctgctattcgagacattgtccaatttgtgccatttagacagttccacaatgctcc caaggaagctcttgctcaaagtgtcctggcagaggtgccacagcaagttgtgagctatttcagcatgtgcaagttgcaac caccaaacaagcctacagccaagcaagaacagcagaagcaagcatgaatcactctgtgggaagtttcggtgcttcctgtc tgtggtgtcccttgattgtgatgcacaataaaagccttttcatacattttacag |
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| Transcript ID | habu1_s2447_g08962.t2 |
| Definition | - |
>habu1_s2447_g08962.t2 aacagaactgggcgaggccggagaagaaggatctctgctcacggaggctggtgtgatctctcgagatggcagcacagtgt gtaacaaaggtggagctgactgtttcttgtaacaatctcctggataaagatattagctccaagtcagaccctctttgtgt gctacttcaatacacaagtggacagcagtggtatgaggttgatcgcacagaaaggatcaaaaacagtttgaaccctaaat tttccaggaaattccagattgattactattttgaactagttcagaaactcaaatttgggatttttgacattgacaataca actgttcagctgaacgatgatgacttcttaggagaatttgaatgcacactgggacagattgtttctagcaagatgcttac cagacctttattgttaagaaatggcaaacctgcaggaaaaggtgtaattatgattagtgcagaagaaataaaagacaacc gtgtagtcctacttgaagttgaagcaaggaaactggacaataaggatttgtttggaaaatccgatccttatttggaattt cacaagcaaacatctgaaggaaaatgggtgatggtccatagaacggaagttgttaaaaataatttgaatcctgtctggag gccattcaaaatctctctcaactctttgtgttatggtgacatggacaaagcaatcaaggttgaatgctatgactacgaca atgatggatcgcatgatctcatagggacgtttcaagctacaatgtctaaactgaaggaagcctctcgacattcaccaatt gaatttgaatgcatcaatgaaaaaaagaggcagaaaaagaaaagctacaaaaactcagggattgtgagctttaaacactg tgaggtcatcacagagtgtactttccttgactacgtcatggggggatgccagttgaattttactgttggcattgatttta ctggatctaatggagatcctcgttcttcagactccttacattacatcagccccaatggagtgaatgaatacttgtcagcc atttggtctgtaggaatggtcattcaggattatgatacagataagatgtttccagcttttgggtttggtgctcagatctc cccttcatggcaggtgtcgcacgaattcccgttgaactttaacccatcgaaccccttctgcagtggggtccagggtattg tggatgcatatcgggtctgccttcctcaaataagattgtatgggcccaccaacttctctccaattatcaatcatgtagct agatttgctgctgcagcttcacagcagagaacagcctcacaatattttatactcctgataatcacggatggggtgataac agaccttgatgaaaccagatctgctattgtcagtgcctctaagcttccaatgtccatcattattgttggtgttggaggtg ctgatttcagtgccatggaatttctggacagtgacagtggagctttgagatcacgttcaggagaagctgctattcgagac attgtccaatttgtgccatttagacagttccacaatgctcccaaggaagctcttgctcaaagtgtcctggcagaggtgcc acagcaagttgtgagctatttcagcatgtgcaagttgcaaccaccaaacaagcctacagccaagcaagaacagcagaagc aagcatgaatcactctgtgggaagtttcggtgcttcctgtctgtggtgtcccttgattgtgatgcacaataaaagccttt tcatacattttacag |
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Protein
| Protein ID | habu1_s2447_g08962.t1 |
|---|---|
| Definition | - |
>habu1_s2447_g08962.t1 MAAQCVTKVELTVSCNNLLDKDISSKSDPLCVLLQYTSGQQWYEVDRTERIKNSLNPKFSRKFQIDYYFELVQKLKFGIF DIDNTTVQLNDDDFLGEFECTLGQIVSSKMLTRPLLLRNGKPAGKGVIMISAEEIKDNRVVLLEVEARKLDNKDLFGKSD PYLEFHKQTSEGKWVMVHRTEVVKNNLNPVWRPFKISLNSLCYGDMDKAIKVECYDYDNDGSHDLIGTFQATMSKLKEAS RHSPIEFECINEKKRQKKKSYKNSGIVSFKHCEVITECTFLDYVMGGCQLNFTVGIDFTGSNGDPRSSDSLHYISPNGVN EYLSAIWSVGMVIQDYDTDKMFPAFGFGAQISPSWQVSHEFPLNFNPSNPFCSGVQGIVDAYRVCLPQIRLYGPTNFSPI INHVARFAAAASQQRTASQYFILLIITDGVITDLDETRSAIVSASKLPMSIIIVGVGGADFSAMEFLDSDSGALRSRSGE AAIRDIVQFVPFRQFHNAPKEALAQSVLAEVPQQVVSYFSMCKLQPPNKPTAKQEQQKQA |
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| Protein ID | habu1_s2447_g08962.t2 |
| Definition | - |
>habu1_s2447_g08962.t2 MAAQCVTKVELTVSCNNLLDKDISSKSDPLCVLLQYTSGQQWYEVDRTERIKNSLNPKFSRKFQIDYYFELVQKLKFGIF DIDNTTVQLNDDDFLGEFECTLGQIVSSKMLTRPLLLRNGKPAGKGVIMISAEEIKDNRVVLLEVEARKLDNKDLFGKSD PYLEFHKQTSEGKWVMVHRTEVVKNNLNPVWRPFKISLNSLCYGDMDKAIKVECYDYDNDGSHDLIGTFQATMSKLKEAS RHSPIEFECINEKKRQKKKSYKNSGIVSFKHCEVITECTFLDYVMGGCQLNFTVGIDFTGSNGDPRSSDSLHYISPNGVN EYLSAIWSVGMVIQDYDTDKMFPAFGFGAQISPSWQVSHEFPLNFNPSNPFCSGVQGIVDAYRVCLPQIRLYGPTNFSPI INHVARFAAAASQQRTASQYFILLIITDGVITDLDETRSAIVSASKLPMSIIIVGVGGADFSAMEFLDSDSGALRSRSGE AAIRDIVQFVPFRQFHNAPKEALAQSVLAEVPQQVVSYFSMCKLQPPNKPTAKQEQQKQA |
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