Gene
| Gene Model ID | habu1_s2447_g08963 |
|---|---|
| Locus | habu1_scaffold2447 : 802637 ... 815688 : + |
| To GenomeBrowser | habu1_scaffold2447:802637..815688 |
| Genes list of scaffold | habu1_scaffold2447 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| regulator of microtubule dynamics protein 1 | GO:0005739 GO:0005813 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2447_g08963.t4 | gi|557274812|ref|XP_006020663.1| | PREDICTED: regulator of microtubule dynamics protein 1 [Alligator sinensis] | 0.0 |
| habu1_s2447_g08963.t4 | gi|564261774|ref|XP_006269776.1| | PREDICTED: regulator of microtubule dynamics protein 1 [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.4 |
| Venom grand-1 | 1.3 |
| Pit, infrared sensing | 2.8 |
| Nose | 3.8 |
| Brain-1 | 4.8 |
| Eye | 2.9 |
| fetal fibroblast | 16.3 |
| venom gland-2 | 5.0 |
| Brain-2 | 6.2 |
| Spleen | 5.4 |
| Lung | 3.0 |
| Liver | 5.3 |
| Kidney | 5.5 |
| Pancreas | 4.4 |
| Small intestine | 4.5 |
| Large intestine | 3.4 |
| Stomach | 7.2 |
| heart | 6.5 |
| ovary | 49.7 |
| cheek muscle | 6.2 |
Transcript
| Transcript ID | habu1_s2447_g08963.t1 |
|---|---|
| Definition | - |
>habu1_s2447_g08963.t1 ttctgggagacccgtttcttttgcgagcccacaaggatgaaatccggctgcagccgtcagctttctttaggtcatggagg gaaaaggggagtcgaggtgtttgaaaaatccagaattttcagaagagggtttatattctcagcattgtcttacttgggat acaacacttatctagtaatttctcagtctgctatggtttgggctgatgtgaaagttgatgaaatcctagatcaagcagac tatctctatgaaagtggagaaacccaaaagctttatcagttgctgagtgaacacaagaacaggtacagtatgctatttcg gcatgttctaatgggctgaggttggcatagagcacacagctatgatacaaaatcactagatacatggaagggttgaaatc agaattttagaatacattatagtggacctcttgagtcctttactctcatttaaaaaacaactttttcttctaattgcttt caatggaaaacaaaatactcaaaatgaaataatatcacatggcactatgcaccgagcaataaatgagcaataaaacagtt tgaagttctaagatcaatttttaaatgcatttaggagattgggaattggttctctgggtaaatttgaatatccccagatt ttaatttctggaattgattacacttgtaaagtacctctactttcactagattcagttcgctgcaaaatacccgttaatta caattattatagtctcatgcagtgctgtgttactaaattgttttaaatttttttattttatataaagttctcccacagaa ctattgtttggtagtaaatgtataataaatatgtctttacattgatacctt |
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| Transcript ID | habu1_s2447_g08963.t2 |
| Definition | - |
>habu1_s2447_g08963.t2 gcttagtcaaacttcagcagaaaaaaagaagcagctggcttatgaagcccttgattatgcaaagaaggcacttgagaaag acaacacttgttatagcgtacacaaggtcagacaaacaaataatttacacttggtagaaatttgaaaggaaaattgcaac aattctttcatatcttaaataataaacttatattcaattaatttaattagtatacagtaattatgcagcaattatcattt caaaccagtctaccaaatgaactgagatcagaaagttccagaaactagctgcagtaatatttctactgacttaattgttt taaagtagatacaatattattgaaatattgcaactagtgattcatactaagatatactcaaaggcaaaaggatgcagaag tagctgcatgatcccaagaaaagattcagttgctttaaaagatgaagatacatataacttaagtatccctgcatgttcca gagcacccttttgcttttaaaacacaagtgttgcatagtgtaagataaatcatagaagagtaattgaactaagttattgc cagttattttttatttcactttttaattttaaaagcctagaatggcttggacggttatagctagtcatgtcctgtttgag tatgaacctgtctagacattaaaattcaatttcttttaaatatctatttttttcggaaacctgtctgaatgtagaatgtg gaaaaggttcttcactctttcaaaattatataatttattctctcaggacttttatgtaatctttacttggtttaaaacct ccttcagcttggacttttaagaaattctatgccattcaatttagttttaactatagttcattttagacagttaaccacct agcattccctattgactaaagcttcagttaacaaatctttgtgtagtatagttaaaaatgttttattgacagtatgataa ttttatattgctaaataatctatttttttcatttagtggtatgcaatatgtctcagtgatgtgggagattatgaaggaat aaagaacaaaattgccagtgcttttgttataaaagaacatttccagaaagcaattgatctgaatccaaaggatgctactt cacttcatcttatgggcatttggtgctacacatttgctgatatgccatggtatcagaggaacatagctactgttttattc tcaacaccacctagttctacctatgaagaagcattacagtactttcaaaaggctgaaaatggtacaaaaagaagcattgg aactactaaattctatatgacacgattactcaaaatatatgaactgatgaactaagaaactaagcagaaagctaaacatt atattgtggttcaaattggtatatgaagaaaagaacttttagagaataaattccagattttgctgacatttccatctgca tctattaatccatctatatacatgttcaaaatggagacaaaaaatcaggaagcagttatgaaattgacaagtattcagaa attttaattttaattcctacttttcttgtttaaactgttatttcaatcattgtctggcatatgaagacatggttttagat atttcatttggataactgcactgtttttgttttggagaatttagtaggacagaatatgcttgcttttatatgtcaaaagg ataattggttaagatatagttataagaatgtggttagaatgcagtattgcacgcttactctgcccaccgccaggagttca atcctgacaggccaaaggttgactcagccttccatcctttcaaggttggtaaaatgaggaccaagattgttgggggcaat atgctgattctgtaaaccacttagagagctgtaaagcactatgaagcttatataagtctgagtgctattgctaatgctat tgtttacccttaagacataaaggtacttttaagcactatggtg |
|
| Transcript ID | habu1_s2447_g08963.t3 |
| Definition | - |
>habu1_s2447_g08963.t3 ttctgggagacccgtttcttttgcgagcccacaaggatgaaatccggctgcagccgtcagctttctttaggtcatggagg gaaaaggggagtcgaggtgtttgaaaaatccagaattttcagaagagggtttatattctcagcattgtcttacttgggat acaacacttatctagtaatttctcagtctgctatggtttgggctgatgtgaaagttgatgaaatcctagatcaagcagac tatctctatgaaagtggagaaacccaaaagctttatcagttgctgagtgaacacaagaacagtgaaaatgcacaagtgtt gtggcgtctggcacgagctttacgagaccttgctcagcttagtcaaacttcagcagaaaaaaagaagcagctggcttatg aagcccttgattatgcaaagaaggcacttgagaaagacaacacttgttatagcgtacacaagtggtatgcaatatgtctc agtgatgtgggagattatgaaggaataaagaacaaaattgccagtgcttttgttataaaagaacatttccagaaagcaat tgatctgaatccaaaggatgctacttcacttcatcttatgggcatttggtgctacacatttgctgatatgccatggtatc agaggaacatagctactgttttattctcaacaccacctagttctacctatgaagaagcattacagtactttcaaaaggct gaaaatgttgaaccaaatttctatagtaaaaacttgctgttcttaggaaagacatacatcagattaaataataaaaagat ggcccttctctggctaacaaaagctagagataggctaccacatacagaggaagataagcaggtacaaaaagaagcattgg aactactaaattctatatgacacgattactcaaaatatatgaactgatgaactaagaaactaagcagaaagctaaacatt atattgtggttcaaattggtatatgaagaaaagaacttttagagaataaattccagattttgctgacatttccatctgca tctattaatccatctatatacatgttcaaaatggagacaaaaaatcaggaagcagttatgaaattgacaagtattcagaa attttaattttaattcctacttttcttgtttaaactgttatttcaatcattgtctggcatatgaagacatggttttagat atttcatttggataactgcactgtttttgttttggagaatttagtaggacagaatatgcttgcttttatatgtcaaaagg ataattggttaagatatagttataagaatgtggttagaatgcagtattgcacgcttactctgcccaccgccaggagttca atcctgacaggccaaaggttgactcagccttccatcctttcaagggtactcttaaaataaaaagtacttctatatataaa aaaaacaccaaaaacccccataaacaaatataaaaatgagagaaataaaaattcaaaaacagtatagctca |
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| Transcript ID | habu1_s2447_g08963.t4 |
| Definition | - |
>habu1_s2447_g08963.t4 gcttagtcaaacttcagcagaaaaaaagaagcagctggcttatgaagcccttgattatgcaaagaaggcacttgagaaag acaacacttgttatagcgtacacaaggtcagacaaacaaataatttacacttggtagaaatttgaaaggaaaattgcaac aattctttcatatcttaaataataaacttatattcaattaatttaattagtatacagtaattatgcagcaattatcattt caaaccagtctaccaaatgaactgagatcagaaagttccagaaactagctgcagtaatatttctactgacttaattgttt taaagtagatacaatattattgaaatattgcaactagtgattcatactaagatatactcaaaggcaaaaggatgcagaag tagctgcatgatcccaagaaaagattcagttgctttaaaagatgaagatacatataacttaagtatccctgcatgttcca gagcacccttttgcttttaaaacacaagtgttgcatagtgtaagataaatcatagaagagtaattgaactaagttattgc cagttattttttatttcactttttaattttaaaagcctagaatggcttggacggttatagctagtcatgtcctgtttgag tatgaacctgtctagacattaaaattcaatttcttttaaatatctatttttttcggaaacctgtctgaatgtagaatgtg gaaaaggttcttcactctttcaaaattatataatttattctctcaggacttttatgtaatctttacttggtttaaaacct ccttcagcttggacttttaagaaattctatgccattcaatttagttttaactatagttcattttagacagttaaccacct agcattccctattgactaaagcttcagttaacaaatctttgtgtagtatagttaaaaatgttttattgacagtatgataa ttttatattgctaaataatctatttttttcatttagtggtatgcaatatgtctcagtgatgtgggagattatgaaggaat aaagaacaaaattgccagtgcttttgttataaaagaacatttccagaaagcaattgatctgaatccaaaggatgctactt cacttcatcttatgggcatttggtgctacacatttgctgatatgccatggtatcagaggaacatagctactgttttattc tcaacaccacctagttctacctatgaagaagcattacagtactttcaaaaggctgaaaatgttgaaccaaatttctatag taaaaacttgctgttcttaggaaagacatacatcagattaaataataaaaagatggcccttctctggctaacaaaagcta gagataggctaccacatacagaggaagataagcaggtacaaaaagaagcattggaactactaaattctatatgacacgat tactcaaaatatatgaactgatgaactaagaaactaagcagaaagctaaacattatattgtggttcaaattggtatatga agaaaagaacttttagagaataaattccagattttgctgacatttccatctgcatctattaatccatctatatacatgtt caaaatggagacaaaaaatcaggaagcagttatgaaattgacaagtattcagaaattttaattttaattcctacttttct tgtttaaactgttatttcaatcattgtctggcatatgaagacatggttttagatatttcatttggataactgcactgttt ttgttttggagaatttagtaggacagaatatgcttgcttttatatgtcaaaaggataattggttaagatatagttataag aatgtggttagaatgcagtattgcacgcttactctgcccaccgccaggagttcaatcctgacaggccaaaggttgactca gccttccatcctttcaagggtactcttaaaataaaaagtacttctatatataaaaaaaacaccaaaaacccccataaaca aatataaaaatgagagaaataaaaattcaaaaacagtatagctca |
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Protein
| Protein ID | habu1_s2447_g08963.t1 |
|---|---|
| Definition | - |
>habu1_s2447_g08963.t1 MKSGCSRQLSLGHGGKRGVEVFEKSRIFRRGFIFSALSYLGYNTYLVISQSAMVWADVKVDEILDQADYLYESGETQKLY QLLSEHKNRYSMLFRHVLMG |
|
| Protein ID | habu1_s2447_g08963.t2 |
| Definition | - |
>habu1_s2447_g08963.t2 MGIWCYTFADMPWYQRNIATVLFSTPPSSTYEEALQYFQKAENGTKRSIGTTKFYMTRLLKIYELMN |
|
| Protein ID | habu1_s2447_g08963.t3 |
| Definition | - |
>habu1_s2447_g08963.t3 MKSGCSRQLSLGHGGKRGVEVFEKSRIFRRGFIFSALSYLGYNTYLVISQSAMVWADVKVDEILDQADYLYESGETQKLY QLLSEHKNSENAQVLWRLARALRDLAQLSQTSAEKKKQLAYEALDYAKKALEKDNTCYSVHKWYAICLSDVGDYEGIKNK IASAFVIKEHFQKAIDLNPKDATSLHLMGIWCYTFADMPWYQRNIATVLFSTPPSSTYEEALQYFQKAENVEPNFYSKNL LFLGKTYIRLNNKKMALLWLTKARDRLPHTEEDKQVQKEALELLNSI |
|
| Protein ID | habu1_s2447_g08963.t4 |
| Definition | - |
>habu1_s2447_g08963.t4 MGIWCYTFADMPWYQRNIATVLFSTPPSSTYEEALQYFQKAENVEPNFYSKNLLFLGKTYIRLNNKKMALLWLTKARDRL PHTEEDKQVQKEALELLNSI |
|