Gene
| Gene Model ID | habu1_s2447_g08964 |
|---|---|
| Locus | habu1_scaffold2447 : 821067 ... 875426 : - |
| To GenomeBrowser | habu1_scaffold2447:821067..875426 |
| Genes list of scaffold | habu1_scaffold2447 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nedd4-like e3 ubiquitin-protein ligase wwp1 isoform x1 | EC:6.3.2.19 GO:0004842 GO:0016567 GO:0016874 GO:0043161 GO:0045892 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2447_g08964.t1 | 1 | 1 | C2 | 60 | 117 | 3.5e-07 | 29.9 | 1.8e-10 | 8.8e-07 | 28.6 |
| habu1_s2447_g08964.t1 | 4 | 1 | WW | 366 | 395 | 0.0 | 155.2 | 5.4e-15 | 2.7e-11 | 43.1 |
| habu1_s2447_g08964.t1 | 4 | 2 | WW | 398 | 427 | 0.0 | 155.2 | 1.0e-16 | 5.1e-13 | 48.6 |
| habu1_s2447_g08964.t1 | 4 | 3 | WW | 473 | 502 | 0.0 | 155.2 | 1.6e-16 | 8.1e-13 | 47.9 |
| habu1_s2447_g08964.t1 | 4 | 4 | WW | 513 | 542 | 0.0 | 155.2 | 1.9e-11 | 9.5e-08 | 31.7 |
| habu1_s2447_g08964.t1 | 1 | 1 | HECT | 632 | 934 | 0.0 | 314.2 | 0.0 | 0.0 | 313.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2447_g08964.t1 | gi|602651993|ref|XP_007432376.1| | PREDICTED: NEDD4-like E3 ubiquitin-protein ligase WWP1 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s2447_g08964.t1 | gi|637288410|ref|XP_008106629.1| | PREDICTED: LOW QUALITY PROTEIN: NEDD4-like E3 ubiquitin-protein ligase WWP1 [Anolis carolinensis] | 0.0 |
| habu1_s2447_g08964.t1 | gi|591371909|ref|XP_007052979.1| | PREDICTED: NEDD4-like E3 ubiquitin-protein ligase WWP1 [Chelonia mydas] | 0.0 |
| habu1_s2447_g08964.t1 | gi|530619494|ref|XP_005299439.1| | PREDICTED: NEDD4-like E3 ubiquitin-protein ligase WWP1 isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s2447_g08964.t1 | gi|530619496|ref|XP_005299440.1| | PREDICTED: NEDD4-like E3 ubiquitin-protein ligase WWP1 isoform X2 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.7 |
| Venom grand-1 | 6.2 |
| Pit, infrared sensing | 6.2 |
| Nose | 3.9 |
| Brain-1 | 5.7 |
| Eye | 5.3 |
| fetal fibroblast | 4.5 |
| venom gland-2 | 4.6 |
| Brain-2 | 7.5 |
| Spleen | 5.1 |
| Lung | 7.6 |
| Liver | 12.0 |
| Kidney | 11.1 |
| Pancreas | 6.1 |
| Small intestine | 6.3 |
| Large intestine | 5.5 |
| Stomach | 7.0 |
| heart | 9.1 |
| ovary | 2.4 |
| cheek muscle | 54.6 |
Transcript
| Transcript ID | habu1_s2447_g08964.t1 |
|---|---|
| Definition | - |
>habu1_s2447_g08964.t1 cgaaggttgaggagacagccctctgtcagagaaagggggcggcggcggtggtgggggcactacctcgcagctgggctctg agccacgatagcgcccaatgttcaagtctgtcaagatcctcctgtatcttaagcctgtcttctggagtgttggctattcc tgccagcttggtgtcgtctgcaaatttgatgagttccccatctatcccctcatccaaatcattgatgaagatgttgaaga gcacctggcccggctgagtatggctgctgccatttatacagaactagtagcagacaatgaagtgaagaaaacatctaagt ctggcagttcctcaaatccaaaatgggaagaacaattgacagtgaatgtgactccacaaaccactttggaatttagagtt tggagccatcatactttaaaagctgatgctttattaggaaaagccactgtagatcttagacaagctttggaagttcacaa tagaagattagaacatgtcaaagaacatttgaagctttcattggaaaataagagtggcttgatacaaacaggagaactga taatagtgcttgatggtttggtgcttgaaacagaatccctttcaaaccgcagttcactagtgaccatagaagtccagcaa aatggtgatgctttacatgaaaatagagaaacatctgctaggatcacttccagattagataatgaaacaccatcaagttc catagtacaggtctcattccctatacatgccattaatggagacaatggagacaactcatcatctcctgatattgtgacca gatccaaaaattcaccaataccaaaaccactgtcaagtgaacaagataacaacattgttagttgtgaatctataatggaa gctgataatctttcaatctccgaaatacctatggattctacagaagcaccatctacgtctgcagattgtaccactactac ttcagaaactcctatagaaactgaggctactactagtaacgctgaaagcagtacctctacaactgcctttagtgcatttt caggacttcagcccattactccttcagattctgtatcctctagcacagagaacaatgcaacaccaatggcagaagtagca aaaccaagggagtctgctaatgtatctggtgaagccataaggcagcaacctggtaacaccaccatagaacctttgcccac agggtgggaacaaagaaaggatccccatggtagaacttattatgttgatcacaacacaagaactacaacttgggaaaggc ctcaacctttgccgccaggctgggaaagaagagttgatgatcgtggaagagtttattatgtggaccataacacacgaaca acaacatggcagagaccaacaatggaatcagtcagaaattttgaacaatggcagtcgcaacgaaatcaattgcaaggagc tatgcaacaatttaaccaacgatacctctattcggcttcaatgctttctgctgaaaatgatccactaggtcctttaccac caggctgggaaagaagagttgattcaaatgacagagtatattttgtaaatcacaatacaaagacaacacagtgggaagat ccacggactcaaggcttacaaaatgaagatccccttccagaaggctgggaaatcagatacaccagagaaggtgtaagata cttcgttgatcataacacacgaacaactaccttcaatgatcctcgtactggtaaatcatctgtaaataaaggaccacaaa ttgcttatgaacgcagctttaggtggaaactagctcatttccgctacttatgtcagtcaaatgctctaccaagccatgtg aagatcaatgtatccagacaaactttgtttgaagattccttccaacagatcatggctttaaaaccttatgacttaaggag acgattgtatgtcatattcagaggagaggaagggttggattatggaggtttagccagagaatggttcttcttgctgtcac atgaagtactgaaccctatgtattgtctctttgaatatgctggcaagagtaattactgtttacagataaatccagcatca acaataaatccagatcatctttcatacttctgtttcattggacgatttattgctatggcattgtttcatggcaaattcat tgatactgggttttccctgccattctacaagcgcatgctaaataagaaactcacaataaaagatttggaatctattgaca ctgagttttataattctctaatttggataagggacaacaatatagaagaatgtaatttagaaatgtacttctgtgttgac atggagctgctaggaaaggttacttcacatgagctgaaatcaggaggatcaaatttacttgtcactgaagaaaataaaga agaatatattggtttaatggcagagtggcgtttttcacgaggagtacaagaacaaaccaaagctttcctggatggattca atgaagttgttcctcttcaatggctacagtattttgatgaaaaagaactggaggttatgctttgtggtatgcaagaggtc gatatggccgactggcaaagaaacactgtttatcgccattatacaagaaatagcaaacaaataatgtggttctggcagtt cataaaagaagctgacaatgaagtccgtatgagactgatgcaatttgtcactggtacttgccggttaccgctgggaggat ttgcagagctcatgggaagcaatggtcctcagaaattctgtgttgaaaaggttgggaaggaaacctggttaccaagaagt cacacgtgttttaatcgtttagatttaccaccttataaaagctatgaacagctgaaagaaaaattgctttttgcaattga ggagacagaaggatttggacaagagtaagactcataaaagtgaagctttcattttttttcagataggctggagcaactaa attgcagttagttgtacataagccgtctcttctgtacagcagtttttctggaaatctttttaaaaggcagttctgttctt ccacaaagatatgcaaaaacttttactttctctacttatttattttgccctcagagatcggccagaatgaaattgaaaca gaaagtctttattttaaaatgtgtgcatatatatatatatatatatctgtatatatctgtatgcatgcacataaacaata gtcagctctagttttat |
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Protein
| Protein ID | habu1_s2447_g08964.t1 |
|---|---|
| Definition | - |
>habu1_s2447_g08964.t1 MFKSVKILLYLKPVFWSVGYSCQLGVVCKFDEFPIYPLIQIIDEDVEEHLARLSMAAAIYTELVADNEVKKTSKSGSSSN PKWEEQLTVNVTPQTTLEFRVWSHHTLKADALLGKATVDLRQALEVHNRRLEHVKEHLKLSLENKSGLIQTGELIIVLDG LVLETESLSNRSSLVTIEVQQNGDALHENRETSARITSRLDNETPSSSIVQVSFPIHAINGDNGDNSSSPDIVTRSKNSP IPKPLSSEQDNNIVSCESIMEADNLSISEIPMDSTEAPSTSADCTTTTSETPIETEATTSNAESSTSTTAFSAFSGLQPI TPSDSVSSSTENNATPMAEVAKPRESANVSGEAIRQQPGNTTIEPLPTGWEQRKDPHGRTYYVDHNTRTTTWERPQPLPP GWERRVDDRGRVYYVDHNTRTTTWQRPTMESVRNFEQWQSQRNQLQGAMQQFNQRYLYSASMLSAENDPLGPLPPGWERR VDSNDRVYFVNHNTKTTQWEDPRTQGLQNEDPLPEGWEIRYTREGVRYFVDHNTRTTTFNDPRTGKSSVNKGPQIAYERS FRWKLAHFRYLCQSNALPSHVKINVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGLDYGGLAREWFFLLSHEVLNP MYCLFEYAGKSNYCLQINPASTINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFYKRMLNKKLTIKDLESIDTEFYNS LIWIRDNNIEECNLEMYFCVDMELLGKVTSHELKSGGSNLLVTEENKEEYIGLMAEWRFSRGVQEQTKAFLDGFNEVVPL QWLQYFDEKELEVMLCGMQEVDMADWQRNTVYRHYTRNSKQIMWFWQFIKEADNEVRMRLMQFVTGTCRLPLGGFAELMG SNGPQKFCVEKVGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE |
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