Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2447_g08972
Locus habu1_scaffold2447 : 1110941 ... 1128076 : -
To GenomeBrowser habu1_scaffold2447:1110941..1128076
Genes list of scaffold habu1_scaffold2447

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 1.8
Venom grand-1 2.4
Pit, infrared sensing 8.3
Nose 0.3
Brain-1 5.7
Eye 1.4
fetal fibroblast 0.1
venom gland-2 2.7
Brain-2 2.0
Spleen 4.6
Lung 89.9
Liver 13.9
Kidney 1.0
Pancreas 0.8
Small intestine 0.5
Large intestine 6.0
Stomach 17.0
heart 18.6
ovary 0.1
cheek muscle 12.9

Transcript
Transcript IDhabu1_s2447_g08972.t1
Definition-
>habu1_s2447_g08972.t1
agtcgaggactacccaaccagttgtaagtcgaggactttccctgcccgggagcgccgcgcatgcgtggttccgccccctg
tgccggccgaggcgtagctggcaagcggcagagacggagcaggccgaccaccagctggcccagctcaagggagctggagg
ccaaaggcggcgacgcagcggcggctggcacgcggggagataaaagggcgtcgcgggactgtgctgggtgcgagcttctc
actgcctccgcctgccacctcctcctcctgccgccgccgccgccgccgccgcctccggtctgcaccccttttgacaccga
aacgacattcgcctctctgcatcgcttccatcccgttagcagactaaagtcatgttacactggggatacgaggaagacaa
cggtgtttgctgcattcctaatgaccagaatgcctggaagtaggcagaaaatgaacaactctagtgttctaacctgcatc
cttggaaaaataagaaaattcaggacctactcactggaaggaaattttccccattgctgatggaaaccggcaatctccca
ttgatattcaaactaaagagactaaatatgactccaacctgcttcctctcagccccagctatgatccttcctctgctaaa
gtaatactcaataatggacattccaccagtgtggaatttgatgacactgagaataaatcagtgctaagtgggggtccact
cactggaaattataggctgcgacaaatccacttccactggggagccagtgatgacattggttctgaacatgctgtggatg
gagcaaaattcccagcagaggaaccaggtgagatggaatataacgaattaataagaggtgcttagaaaacagtatgttcc
aaaacagatatatagctggaaagaaataagttccatctaagaaaccaaatggaaggagaaaatatttaggaatgtttagt
cagtttaaaaagttttccctctgccgattatcaagaacccactagaaaccctactgatttttgggggggaaagatcctag
atttgagagagtgtcaggctgatcatacgggtggagatatgcccaaaaggtcagtgaacagatgtaccatgttgagccct
gggaagaaaaggctctttggctcaagaatgcacctctgccaaattggcacatgcaagaagaaagagctgctctgcagaca
gaagacaacactgttcctctggcagatgatctctgtggatccaaagtcctattaatctgaagcagcctatctcctggacc
caggtgtttccaacaggctgcgatacagttctgctgaggatgatgcataaaagaaacaggccttaaaagatttctccaac
aagctgtggtgaaagagcggtgcttcatgtggtgcactggaatgcaggtaaataccccagctttgttgaagctgctcaga
aacctgatggattagcagtcatggctgttttcttaaaattgggtgaatgcaattcacaactgaaaaaaatcacagaccaa
ctggataccattaaagtgaagggtaaccagcacaggttcaccaattttgatccttcctgtctgctccctcattcactgga
ctactggacttaccttgggtctctcacagttcctcctcttcttgagagtgtcatttggatcatccttagggagcctataa
gtgtttgctctgaacagctggccaaatttcgcaacctcctgtgcactggtgaaggagagcatgcctactgcatgctgaaa
aacttcagaccaccacagcctttaaggggtcgggaagtaagaagaaattaaagaaaggataatttgcttgacactgtttt
ggatgcaaaacccatttaaaatattgcccttattttttaaaaaaaatattttaatttgaagtgtggcaatgtttttcatt
tttaaattgtaggaattttgatggaaatacagaatagaatagaatagaatagaatagaatagaatagaatagaatagaat
agaatagaatagaacattattatgatccctgacaattttgcccctacaatataaatcccaaataaaaacttatgagcttg
tataaaat
Transcript IDhabu1_s2447_g08972.t2
Definition-
>habu1_s2447_g08972.t2
agtcgaggactacccaaccagttgtaagtcgaggactttccctgcccgggagcgccgcgcatgcgtggttccgccccctg
tgccggccgaggcgtagctggcaagcggcagagacggagcaggccgaccaccagctggcccagctcaagggagctggagg
ccaaaggcggcgacgcagcggcggctggcacgcggggagataaaagggcgtcgcgggactgtgctgggtgcgagcttctc
actgcctccgcctgccacctcctcctcctgccgccgccgccgccgccgccgcctccggtctgcaccccttttgacaccga
aacgacattcgcctctctgcatcgcttccatcccgttagcagactaaagtcatgttacactggggatacgaggaagacaa
cggtgtttgctgcattcctaatgaccagaatgcctggaagtaggcagaaaatgaacaactctagtgttctaacctgcatc
cttggaaaaataagaaaattcaggacctactcactggaaggaaattttccccattgctgatggaaaccggcaatctccca
ttgatattcaaactaaagagactaaatatgactccaacctgcttcctctcagccccagctatgatccttcctctgctaaa
gtaatactcaataatggacattccaccagtgtggaatttgatgacactgagaataaatcagtgctaagtgggggtccact
cactggaaattataggctgcgacaaatccacttccactggggagccagtgatgacattggttctgaacatgctgtggatg
gagcaaaattcccagcagagcttcatgtggtgcactggaatgcaggtaaataccccagctttgttgaagctgctcagaaa
cctgatggattagcagtcatggctgttttcttaaaattgggtgaatgcaattcacaactgaaaaaaatcacagaccaact
ggataccattaaagtgaagggtaaccagcacaggttcaccaattttgatccttcctgtctgctccctcattcactggact
actggacttaccttgggtctctcacagttcctcctcttcttgagagtgtcatttggatcatccttagggagcctataagt
gtttgctctgaacagctggccaaatttcgcaacctcctgtgcactggtgaaggagagcatgcctactgcatgctgaaaaa
cttcagaccaccacagcctttaaggggtcgggaagtaagaagaaattaaagaaaggataatttgcttgacactgttttgg
atgcaaaacccatttaaaatattgcccttattttttaaaaaaaatattttaatttgaagtgtggcaatgtttttcatttt
taaattgtaggaattttgatggaaatacagaatagaatagaatagaatagaatagaatagaatagaatagaatagaatag
aatagaatagaacattattatgatccctgacaattttgcccctacaatataaatcccaaataaaaacttatgagcttgta
taaaat

Protein
Protein IDhabu1_s2447_g08972.t1
Definition-
>habu1_s2447_g08972.t1
MRGSAPCAGRGVAGKRQRRSRPTTSWPSSRELEAKGGDAAAAGTRGDKRASRDCAGCELLTASACHLLLLPPPPPPPPPV
CTPFDTETTFASLHRFHPVSRLKSCYTGDTRKTTVFAAFLMTRMPGSRQKMNNSSVLTCILGKIRKFRTYSLEGNFPHC
Protein IDhabu1_s2447_g08972.t2
Definition-
>habu1_s2447_g08972.t2
MRGSAPCAGRGVAGKRQRRSRPTTSWPSSRELEAKGGDAAAAGTRGDKRASRDCAGCELLTASACHLLLLPPPPPPPPPV
CTPFDTETTFASLHRFHPVSRLKSCYTGDTRKTTVFAAFLMTRMPGSRQKMNNSSVLTCILGKIRKFRTYSLEGNFPHC

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Chromosome
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495