Gene
| Gene Model ID | habu1_s2447_g08977 |
|---|---|
| Locus | habu1_scaffold2447 : 1200690 ... 1300824 : - |
| To GenomeBrowser | habu1_scaffold2447:1200690..1300824 |
| Genes list of scaffold | habu1_scaffold2447 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| rna-binding raly-like protein isoform x3 | GO:0000166 GO:0044822 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2447_g08977.t2 | 1 | 1 | RRM_1 | 65 | 127 | 7.1e-11 | 41.5 | 7.8e-14 | 1.3e-10 | 40.7 |
| habu1_s2447_g08977.t2 | 1 | 1 | RRM_6 | 65 | 125 | 4.8e-06 | 26.4 | 5.2e-09 | 8.6e-06 | 25.6 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.7 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 0.7 |
| Nose | 3.4 |
| Brain-1 | 19.2 |
| Eye | 2.8 |
| fetal fibroblast | 0.2 |
| venom gland-2 | 0.1 |
| Brain-2 | 12.5 |
| Spleen | 1.6 |
| Lung | 0.1 |
| Liver | 0.1 |
| Kidney | 0.6 |
| Pancreas | 5.5 |
| Small intestine | 0.0 |
| Large intestine | 0.1 |
| Stomach | 0.0 |
| heart | 1.1 |
| ovary | 0.1 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s2447_g08977.t1 |
|---|---|
| Definition | - |
>habu1_s2447_g08977.t1 ccaggacttccttctttaccgcctctttggggcggcttctggtccatttagggtcccctaacagtaagaaaatcagctga agggcatggagccccgaacccctcgactgctgcgctactgcacaagactgaaagtcactttgtttgaattattctatcaa ctatctgaaatgcatagattaaacaaagggctgaaatcaagtgagccaaccatgaccggcaaaacacagaccagtaatgt taccaataagaatgatcccaaatccatcaactccagagtcttcattggtaatcttaatacagccattgtcaaaaaaggag atatagaagcaatctttgcaaagtatggaaaaatagtcggctgttcagtgcacaaaggttatgcatttgtacaatacatg agtgagaggcatgcgagagctgctgtggcaggagaaaatgccaggatcattgcaggacaaccactgggacttgcaatgac tatgtacaagagcaagcgaagacaccaacaaagatacattaatatggcaggggagccaaaaccatacagacctaagctgg gaactaagcgaccactttctgctctctacagacttgaatcaaaagaacctttcctttctgttggtggttatgtctttgat tatgattattacagagatgatttctacaatcggttatttgattatcacagccgggttcctgccccacctcgtgctgtgat tcctttgaaacgcccacgagtaacagtcacagcaactcgcagaggaaagggagtcttttccatgaaagggacatcaaggt ctacatcaagtggagcttcttcatcaggagcaaaattgaaatcagatgaattgcagacaatcaagaaggaattaacgcaa atcaaaacaaaaattgattctttgttaggaagactggacaagattgaaaagcagcagaaagttcaatcagaaatccaaaa gaaacaaatagaagacagtatagagttaatccaagaagaatgcatatcagagaatgctgacaactctacagaagaacctg ttgaaggagggctggatggggacggagaagaaatgacagatgggatagatgaagatttcgatgaggagggtagtaatgag ctgaaaaagacaagcaagaaaacaaagaaaaacaaaacaaaaatcctgcaagtttctacagatcaaatgaattgggaccc ttacacaacccttttggaagctgagaagataattcatagacttccctgtgtgaaaatgtaaactacagtttcttgtcagc tcatagcatatttgactcaatttgtatgaagaactgaatttacttttggaaatggagaccaccattcaaaattttaaaac atatgtttaaaactacacaattgtcatatttttatggtttggactataaatgtgtttctcctggctaatcattggtaatt ttttttattttgatgtcagatagccaatgacttgtataataatatgaaggacatatttaaagcaaaagaaattactgtat acaaatgtatatttgtaaaagctatttttatgattagcatgttttatggttcatcatatttacagtcaggtgatattgca cttaaatgtttacagcataatgaagagatcatcaaaaatttatgagccaatatatattttaattattttttattcctgct ttaaggcaaatacatacattagtgggttatcaaaaagaacaaatcaatatttgtctttgaagatttttagtgcatcatta cactaaaatggatataatttgaaaatattctgtatacaatttcctgtgatatcagtagaaaattattattaatgtcaata tgccccaacttctatgttgctactcttagcttcagataagcacattctggatagactatagatcagtatggttcaaaaat ctcttaatacttttatgagggttgccatgttgtaaagttggcatgtttgatgcctgtctgctttctattccactgaattg tcttttttgacctcttcaggtaactggaagttccagtttaacctattttagccagacaggtagacagataccttggtttc tctggggttaaattgcaaaatgaggggagtgcatcatacagtatagactgttttttcagtcttgcttagagaacgaggct tgaaactggactctttccatgatcataattcatattaatctgaataagggtaaaataagtggtttttgtcaacttaatta gtaggacatcattaccaaatccaagcacttttctgagggcccaaaggaaccatcacacatccaatcatgtctacatttat agttaaatagaagatgtatttgattttggtaagtgttcactgaatggctgcctggtctttcccccaaacctcttcaaagg gcttcagtgtattgcttagtattttcacaaatatttcttcagtctacatttttggaaatgcagcttccatgaattcattg ctacatcattttactcatgcaattcatgaattatccagatctagatatcaattgtaaagtgcctcagttgaccattatag atttcacaatgcttgaatgtgactcttacaatgtccatacataaggattcaggcaggaatacgcagtatgttatctataa agcatctctaactgcagcgttgtatctccagattaacggctgtgggaaaagaacagcctgttgctcaattaaacctggga ataaaatgtgaagccgccatctgctaaatctagcattagttcagatgccagacactcaagctggaattttttgtaggcag aacacatgttttacttgaactgatagctccttcaccctgaccttctgtctcttgcattattacaatgtttccataaaagc tatctattttctgtataaattatttttttctcagtccatgcagtgattataaaagtaccaagagaaagaagagaataagc agggtttgtttctgcatcgtttgctgtaagtctgtacccaaatacctttgcacgcaagacaaatgaatccagaaaaagag ttggaattttgattctattatcataggaacatttccccctctgttttaaacatatgtattaagttgtgttgcactttggt ttagaacaattctatgaaatgggaaaataatgttaagaccatggaaaatattattacttgaataaaatatagggttgaac aataccatttggaaggagtttttcagaacatgaagcaacacaaacagctgctctaatgagttgcagaacggaaatagttt cagctcccacaaataccagaacacttcatttgaattaaatccaaaacatggcacatccataagggaactctacagccatt tttaaaagccatggaggttttcaataataggacagtattttcattcatcttctgaagattttggttttttgtcaacattc aacacaattttttttcaaatgctgtaacataaattttacattcctgtaaataaatattttcctttgattaatggattaat tctcttcaatagttcttctgaaaatactaatgatggaaattaacagcggctcaaaaaaaaaatcagcctgacatccaata ctgtaaattcaaagctttgttcataagtaaacatctcttaagtttatgctatgtatttctgaaacttgagaaaaaataat actaattatcaaaatggttgaatcatctccatgctgtaaatcaattgaaaggtaactgcagatctgtgcttaacatctgg gctattatctaagttagaaaacaatttttctgataatcatttatcttgatataccttcagtgtcagcaatatcaaaagga attcacagggaggacatttctcaacacatctttcaaaagactattatttcaacaagataaaaagtcacaacaactgcaag acaatgatactaaattttttcagcaccataaaccattaaaatttcaaataagactgactttttacgtcatcttgatacta taaattatggggatgtactttctaaacaatactatttaactgacgttaaatgaaaccaggtgttttggaatacaagactg acaagaataatcttccatattaaaagttccctttaagcagggtggcaattcttgataataaaagggaacaaaatgtggcc ctggttgcattactcagaaaactgagtatataggggaaaatatcttgataactattgagaaagcaagagtgaatagaggn nnnnnn |
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| Transcript ID | habu1_s2447_g08977.t2 |
| Definition | - |
>habu1_s2447_g08977.t2 ccaggacttccttctttaccgcctctttggggcggcttctggtccatttagggtcccctaacagtaagaaaatcagctga agggcatggagccccgaacccctcgactgctgcgctactgcacaagactgaaagtcactttgtttgaattattctatcaa ctatctgaaatgcatagattaaacaaagggctgaaatcaagtgagccaaccatgaccggcaaaacacagaccagtaatgt taccaataagaatgatcccaaatccatcaactccagagtcttcattggtaatcttaatacagccattgtcaaaaaaggag atatagaagcaatctttgcaaagtatggaaaaatagtcggctgttcagtgcacaaaggttatgcatttgtacaatacatg agtgagaggcatgcgagagctgctgtggcaggagaaaatgccaggatcattgcaggacaaccactgggacttgcaatgac tatgtacaagagcaagcgaagacaccaacaaagatacattaatatggcaggggagccaaaaccatacagacctaagctgg gaactaagcgaccactttctgctctctacagacttgaatcaaaagaacctttcctttctgttggtggttatgtctttgat tatgattattacagagatgatttctacaatcggttatttgattatcacagccgggttcctgccccacctcgtgctgtgat tcctttgaaacgcccacgagtaacagtcacagcaactcgcagaggaaagggagtcttttccatgaaagggacatcaaggt ctacatcaagtggagcttcttcatcaggagcaaaattgaaatcagatgaattgcagacaatcaagaaggaattaacgcaa atcaaaacaaaaattgattctttgttaggaagactggacaagattgaaaagcagcagaaagttcaatcagaaatccaaaa gaaacaaatagaagacagtatagagttaatccaagaagaatgcatatcagagaatgctgacaactctacagaagaacctg ttgaaggagggctggatggggacggagaagaaatgacagatgggatagatgaagatttcgatgaggagggtagtaatgag ctgtttctacagatcaaatgaattgggacccttacacaacccttttggaagctgagaagataattcatagacttccctgt gtgaaaatgtaaactacagtttcttgtcagctcatagcatatttgactcaatttgtatgaagaactgaatttacttttgg aaatggagaccaccattcaaaattttaaaacatatgtttaaaactacacaattgtcatatttttatggtttggactataa atgtgtttctcctggctaatcattggtaattttttttattttgatgtcagatagccaatgacttgtataataatatgaag gacatatttaaagcaaaagaaattactgtatacaaatgtatatttgtaaaagctatttttatgattagcatgttttatgg ttcatcatatttacagtcaggtgatattgcacttaaatgtttacagcataatgaagagatcatcaaaaatttatgagcca atatatattttaattattttttattcctgctttaaggcaaatacatacattagtgggttatcaaaaagaacaaatcaata tttgtctttgaagatttttagtgcatcattacactaaaatggatataatttgaaaatattctgtatacaatttcctgtga tatcagtagaaaattattattaatgtcaatatgccccaacttctatgttgctactcttagcttcagataagcacattctg gatagactatagatcagtatggttcaaaaatctcttaatacttttatgagggttgccatgttgtaaagttggcatgtttg atgcctgtctgctttctattccactgaattgtcttttttgacctcttcaggtaactggaagttccagtttaacctatttt agccagacaggtagacagataccttggtttctctggggttaaattgcaaaatgaggggagtgcatcatacagtatagact gttttttcagtcttgcttagagaacgaggcttgaaactggactctttccatgatcataattcatattaatctgaataagg gtaaaataagtggtttttgtcaacttaattagtaggacatcattaccaaatccaagcacttttctgagggcccaaaggaa ccatcacacatccaatcatgtctacatttatagttaaatagaagatgtatttgattttggtaagtgttcactgaatggct gcctggtctttcccccaaacctcttcaaagggcttcagtgtattgcttagtattttcacaaatatttcttcagtctacat ttttggaaatgcagcttccatgaattcattgctacatcattttactcatgcaattcatgaattatccagatctagatatc aattgtaaagtgcctcagttgaccattatagatttcacaatgcttgaatgtgactcttacaatgtccatacataaggatt caggcaggaatacgcagtatgttatctataaagcatctctaactgcagcgttgtatctccagattaacggctgtgggaaa agaacagcctgttgctcaattaaacctgggaataaaatgtgaagccgccatctgctaaatctagcattagttcagatgcc agacactcaagctggaattttttgtaggcagaacacatgttttacttgaactgatagctccttcaccctgaccttctgtc tcttgcattattacaatgtttccataaaagctatctattttctgtataaattatttttttctcagtccatgcagtgatta taaaagtaccaagagaaagaagagaataagcagggtttgtttctgcatcgtttgctgtaagtctgtacccaaataccttt gcacgcaagacaaatgaatccagaaaaagagttggaattttgattctattatcataggaacatttccccctctgttttaa acatatgtattaagttgtgttgcactttggtttagaacaattctatgaaatgggaaaataatgttaagaccatggaaaat attattacttgaataaaatatagggttgaacaataccatttggaaggagtttttcagaacatgaagcaacacaaacagct gctctaatgagttgcagaacggaaatagtttcagctcccacaaataccagaacacttcatttgaattaaatccaaaacat ggcacatccataagggaactctacagccatttttaaaagccatggaggttttcaataataggacagtattttcattcatc ttctgaagattttggttttttgtcaacattcaacacaattttttttcaaatgctgtaacataaattttacattcctgtaa ataaatattttcctttgattaatggattaattctcttcaatagttcttctgaaaatactaatgatggaaattaacagcgg ctcaaaaaaaaaatcagcctgacatccaatactgtaaattcaaagctttgttcataagtaaacatctcttaagtttatgc tatgtatttctgaaacttgagaaaaaataatactaattatcaaaatggttgaatcatctccatgctgtaaatcaattgaa aggtaactgcagatctgtgcttaacatctgggctattatctaagttagaaaacaatttttctgataatcatttatcttga tataccttcagtgtcagcaatatcaaaaggaattcacagggaggacatttctcaacacatctttcaaaagactattattt caacaagataaaaagtcacaacaactgcaagacaatgatactaaattttttcagcaccataaaccattaaaatttcaaat aagactgactttttacgtcatcttgatactataaattatggggatgtactttctaaacaatactatttaactgacgttaa atgaaaccaggtgttttggaatacaagactgacaagaataatcttccatattaaaagttccctttaagcagggtggcaat tcttgataataaaagggaacaaaatgtggccctggttgcattactcagaaaactgagtatataggggaaaatatcttgat aactattgagaaagcaagagtgaatagaggnnnnnnn |
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Protein
| Protein ID | habu1_s2447_g08977.t1 |
|---|---|
| Definition | - |
>habu1_s2447_g08977.t1 MEPRTPRLLRYCTRLKVTLFELFYQLSEMHRLNKGLKSSEPTMTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKGDI EAIFAKYGKIVGCSVHKGYAFVQYMSERHARAAVAGENARIIAGQPLGLAMTMYKSKRRHQQRYINMAGEPKPYRPKLGT KRPLSALYRLESKEPFLSVGGYVFDYDYYRDDFYNRLFDYHSRVPAPPRAVIPLKRPRVTVTATRRGKGVFSMKGTSRST SSGASSSGAKLKSDELQTIKKELTQIKTKIDSLLGRLDKIEKQQKVQSEIQKKQIEDSIELIQEECISENADNSTEEPVE GGLDGDGEEMTDGIDEDFDEEGSNELKKTSKKTKKNKTKILQVSTDQMNWDPYTTLLEAEKIIHRLPCVKM |
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| Protein ID | habu1_s2447_g08977.t2 |
| Definition | - |
>habu1_s2447_g08977.t2 MEPRTPRLLRYCTRLKVTLFELFYQLSEMHRLNKGLKSSEPTMTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKGDI EAIFAKYGKIVGCSVHKGYAFVQYMSERHARAAVAGENARIIAGQPLGLAMTMYKSKRRHQQRYINMAGEPKPYRPKLGT KRPLSALYRLESKEPFLSVGGYVFDYDYYRDDFYNRLFDYHSRVPAPPRAVIPLKRPRVTVTATRRGKGVFSMKGTSRST SSGASSSGAKLKSDELQTIKKELTQIKTKIDSLLGRLDKIEKQQKVQSEIQKKQIEDSIELIQEECISENADNSTEEPVE GGLDGDGEEMTDGIDEDFDEEGSNELFLQIK |
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