Gene
| Gene Model ID | habu1_s2452_g08995 |
|---|---|
| Locus | habu1_scaffold2452 : 251976 ... 277893 : + |
| To GenomeBrowser | habu1_scaffold2452:251976..277893 |
| Genes list of scaffold | habu1_scaffold2452 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| acyl- dehydrogenase family member mitochondrial | EC:1.3.99.3 GO:0003995 GO:0005634 GO:0005739 GO:0006118 GO:0030425 GO:0050660 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2452_g08995.t1 | 1 | 1 | Acyl-CoA_dh_N | 57 | 165 | 6.2e-24 | 84.7 | 5.0e-27 | 1.9e-23 | 83.2 |
| habu1_s2452_g08995.t1 | 1 | 1 | Acyl-CoA_dh_M | 169 | 222 | 1.6e-23 | 81.9 | 7.7e-27 | 2.9e-23 | 81.1 |
| habu1_s2452_g08995.t1 | 1 | 1 | Acyl-CoA_dh_1 | 282 | 429 | 4.79945e-42 | 143.5 | 1.70006e-41 | 6.3e-38 | 130.2 |
| habu1_s2452_g08995.t1 | 1 | 1 | Acyl-CoA_dh_2 | 300 | 421 | 1.0e-07 | 32.2 | 9.2e-11 | 3.4e-07 | 30.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2452_g08995.t1 | gi|602654539|ref|XP_007433097.1| | PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial-like isoform X1 [Python bivittatus] | 0.0 |
| habu1_s2452_g08995.t1 | gi|602654541|ref|XP_007433098.1| | PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial-like isoform X2 [Python bivittatus] | 0.0 |
| habu1_s2452_g08995.t1 | gi|591363318|ref|XP_007056563.1| | PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial-like [Chelonia mydas] | 0.0 |
| habu1_s2452_g08995.t1 | gi|327265911|ref|XP_003217751.1| | PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial [Anolis carolinensis] | 0.0 |
| habu1_s2452_g08995.t1 | gi|530646406|ref|XP_005309837.1| | PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 9.2 |
| Venom grand-1 | 13.7 |
| Pit, infrared sensing | 12.6 |
| Nose | 10.5 |
| Brain-1 | 6.4 |
| Eye | 8.5 |
| fetal fibroblast | 24.1 |
| venom gland-2 | 19.4 |
| Brain-2 | 9.0 |
| Spleen | 8.0 |
| Lung | 4.8 |
| Liver | 24.6 |
| Kidney | 16.4 |
| Pancreas | 8.8 |
| Small intestine | 14.3 |
| Large intestine | 13.9 |
| Stomach | 14.0 |
| heart | 39.9 |
| ovary | 22.3 |
| cheek muscle | 49.7 |
Transcript
| Transcript ID | habu1_s2452_g08995.t1 |
|---|---|
| Definition | - |
>habu1_s2452_g08995.t1 aggacgggcagcggccggagacatgagcgggctggctctgcttttgcgagcggcgcgaacggcgttcccatccggggcca ggctgtttcgcaccggctgctttcggcccgcttttgttaaggagcttttcatgggaaacttccaagggaaggaagtattt ccttatcctgaaattagcaatgaagaattggaagaaatcaatgacttcgtagcaccagtggaaaaattcttccaggaaga agtggattctaagaaaattgatcaagatgctaaaattccacaagaaactcttaatgggctgaagaatctggggctttttg gcatgcagataccagaggaatatggtggccttggtctttcaaacacaatgtatgcccgtctaggagaaataacttctcaa gatggagctattgctgtaactttggcagctcatcaggctatagggctaaaggggctcctgcttgaaggcactgaggaaca gaagaaaaagtatctacctaaactggcctctggggagcacattgcagcattttgtctcacagaaccaggaagtggaagcg atgctgcatccattcagaccagagccaccttgagtgaagatggaaagcattacatattaaatggttcaaagatatggata tccaatggtggtattgcagatatctttactgtgtttgcaaaaaccgatattgttgataaagatggtgcattcaaagacaa aattactgctttcattgtagaaagagcttttggtggaatcactaatggaaaagcagaggataaactgggtatacgtggat ctaatacttgtgaagttcactttgaaaatacaaacgttcctgtagagaatgttattggagaagttggagaagggtttaag gttgcaatgaatattctaaacagtgggagatttagcatgggcagtgcctctgctggaatgcttaagaaactgattgaaat gactgcagaatatgcttgtacaagaaaacaattcaataagaacctgagtgaatttggattaattcaggagaaatttgccc ttatggctaggaaagcttatgtaatggaaagcatggcctatctcactgcaggaatgatggacaggccaggaatcccagat tgctcggttgaagctgccattgttaaagtgttcagttctgaaggttcttgggtttgtgtgagtgaagcgctacaaattct tggaggccttggctacataaaagactatccatatgagcgctatctccgggactgtaggatacttatgatttttgagggaa caaatgaagttttgaggatgtatattgctttgacaggcatgcaatatgcaggcaaaatcttaactgaaaaaataaaagaa ttcaagaaaagaaacgtaaaagtgatatggaatctacttgtgggcagtctgtttggcagcaagcctccaagcatagaagt aattgggcatggaggagaagttcatcccaatctcaaagaaagtgttaagaaacttgaacaaaacatctttgagtttggca agatagttgaaagtttactaataaggtttggcaagactattgtgaatgagcagatggttcttaaaaaagtggcaaacatt gttattaatttatatgcaatgactgcagtcatatccagggctagccgatctatctgcattggtttaaataatcatgatca tgaggtgctgcttgcaaatattttctgcgctgaagcttgttttgagaataattatacaatagtatcattacaaaaagatt ctcctgaaaacctggatgacagcattaaaaaagtggcaaatcaggtgctggaaaaaagaagttatatttgttcacacccg ctaaacagaactgtctgaaagctgaaaaatattactggagccggagaacacagtaactgaatgtattcagactggatcct caggtatattcttagatctgaggcaaattacttgactaataacatatacggtttcatattctacagtgcaattttataaa atacaataaagtaataaattacatacgcctgc |
|
Protein
| Protein ID | habu1_s2452_g08995.t1 |
|---|---|
| Definition | - |
>habu1_s2452_g08995.t1 MSGLALLLRAARTAFPSGARLFRTGCFRPAFVKELFMGNFQGKEVFPYPEISNEELEEINDFVAPVEKFFQEEVDSKKID QDAKIPQETLNGLKNLGLFGMQIPEEYGGLGLSNTMYARLGEITSQDGAIAVTLAAHQAIGLKGLLLEGTEEQKKKYLPK LASGEHIAAFCLTEPGSGSDAASIQTRATLSEDGKHYILNGSKIWISNGGIADIFTVFAKTDIVDKDGAFKDKITAFIVE RAFGGITNGKAEDKLGIRGSNTCEVHFENTNVPVENVIGEVGEGFKVAMNILNSGRFSMGSASAGMLKKLIEMTAEYACT RKQFNKNLSEFGLIQEKFALMARKAYVMESMAYLTAGMMDRPGIPDCSVEAAIVKVFSSEGSWVCVSEALQILGGLGYIK DYPYERYLRDCRILMIFEGTNEVLRMYIALTGMQYAGKILTEKIKEFKKRNVKVIWNLLVGSLFGSKPPSIEVIGHGGEV HPNLKESVKKLEQNIFEFGKIVESLLIRFGKTIVNEQMVLKKVANIVINLYAMTAVISRASRSICIGLNNHDHEVLLANI FCAEACFENNYTIVSLQKDSPENLDDSIKKVANQVLEKRSYICSHPLNRTV |
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