Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2453_g09005
Locus habu1_scaffold2453 : 222896 ... 230679 : +
To GenomeBrowser habu1_scaffold2453:222896..230679
Genes list of scaffold habu1_scaffold2453

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s2453_g09005.t1 gi|602637579|ref|XP_007425632.1| PREDICTED: putative uncharacterized protein C3orf83 homolog isoform X1 [Python bivittatus] 0.0
habu1_s2453_g09005.t1 gi|327265907|ref|XP_003217749.1| PREDICTED: putative uncharacterized protein C3orf83 homolog [Anolis carolinensis] 0.0
habu1_s2453_g09005.t1 gi|530644962|ref|XP_005309151.1| PREDICTED: putative uncharacterized protein C3orf83 homolog [Chrysemys picta bellii] 0.0
habu1_s2453_g09005.t1 gi|564247023|ref|XP_006262619.1| PREDICTED: putative uncharacterized protein C3orf83-like [Alligator mississippiensis] 0.0
habu1_s2453_g09005.t1 gi|591363294|ref|XP_007056551.1| PREDICTED: putative uncharacterized protein C3orf83 homolog [Chelonia mydas] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 1.9
Venom grand-1 4.4
Pit, infrared sensing 2.2
Nose 3.3
Brain-1 1.3
Eye 1.6
fetal fibroblast 1.5
venom gland-2 5.2
Brain-2 2.1
Spleen 2.4
Lung 2.3
Liver 5.3
Kidney 3.8
Pancreas 7.1
Small intestine 3.2
Large intestine 4.1
Stomach 3.5
heart 2.3
ovary 24.6
cheek muscle 4.6

Transcript
Transcript IDhabu1_s2453_g09005.t1
Definition-
>habu1_s2453_g09005.t1
gagtgcccctctcccagtttaaagttataggtttcgggactcgctacttctgggatgtctgtatgggttccttttgctta
tctggctgggaatagggggggaaatgcacaaccagcaacaagagaggatctggtttttgttccaaagatgctttttcacg
aggcaactggacttcttgtttttgtttgaagacgtttcgcttctcattcaagaaacttcttcagagaactgcccactatg
tgggcaaaggctgatttacagaagtctggaagaagcacctgtcagtattccaagcccatttgttaatggacacggagaaa
aatgttcttttttactgaagcccactataggaacatttctaagagattatgatggagattctgaccttcatgttggaata
accagtaccaatggtttggtttataattacaatgaaactggtattaccattgctgaatatggatgggaacaatgtgtaag
cattccacttgtgcagcctgatatgtatgccctccttaatcaatgggatacttatctagaacaattttcaacaacagata
tttggcttccacacaggtatgaagaatgtttccataattgttatacttatgcactaacatttattaactgtgtgctgagt
gcccaaaagcaacaacaaatgaataaaaatgaatttacagagaaatttgtaattccgcgaacaagaaaagcttccaaata
tatcactatctacaaagaaatatgcaagaatggtttttacgttgttgatcatccttctcaaaaaggcagtacttctgcca
atgccatttgactttaggccgaagcacttactgacgataaataaaattaaaatattcaagttaagac

Protein
Protein IDhabu1_s2453_g09005.t1
Definition-
>habu1_s2453_g09005.t1
MHNQQQERIWFLFQRCFFTRQLDFLFLFEDVSLLIQETSSENCPLCGQRLIYRSLEEAPVSIPSPFVNGHGEKCSFLLKP
TIGTFLRDYDGDSDLHVGITSTNGLVYNYNETGITIAEYGWEQCVSIPLVQPDMYALLNQWDTYLEQFSTTDIWLPHRYE
ECFHNCYTYALTFINCVLSAQKQQQMNKNEFTEKFVIPRTRKASKYITIYKEICKNGFYVVDHPSQKGSTSANAI

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