Gene
| Gene Model ID | habu1_s24_g00209 |
|---|---|
| Locus | habu1_scaffold24 : 292206 ... 348293 : + |
| To GenomeBrowser | habu1_scaffold24:292206..348293 |
| Genes list of scaffold | habu1_scaffold24 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein nov homolog | GO:0001558 GO:0005520 GO:0016942 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s24_g00209.t1 | 1 | 1 | VWC | 221 | 284 | 3.1e-09 | 36.7 | 8.5e-13 | 3.1e-09 | 36.7 |
| habu1_s24_g00209.t1 | 1 | 1 | TSP_1 | 319 | 359 | 8.2e-07 | 29.0 | 2.2e-10 | 8.2e-07 | 29.0 |
| habu1_s24_g00209.t1 | 1 | 1 | Cys_knot | 371 | 455 | 1.2e-12 | 47.8 | 3.1e-16 | 1.2e-12 | 47.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s24_g00209.t1 | gi|637333554|ref|XP_003224878.2| | PREDICTED: protein NOV homolog [Anolis carolinensis] | 0.0 |
| habu1_s24_g00209.t1 | gi|698410707|ref|XP_009693066.1| | PREDICTED: protein NOV homolog, partial [Cariama cristata] | 0.0 |
| habu1_s24_g00209.t1 | gi|663246922|ref|XP_008503606.1| | PREDICTED: protein NOV homolog [Calypte anna] | 0.0 |
| habu1_s24_g00209.t1 | gi|719758176|ref|XP_010215420.1| | PREDICTED: protein NOV homolog, partial [Tinamus guttatus] | 0.0 |
| habu1_s24_g00209.t1 | gi|706129058|ref|XP_010199124.1| | PREDICTED: protein NOV homolog, partial [Colius striatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.0 |
| Venom grand-1 | 4.5 |
| Pit, infrared sensing | 1.9 |
| Nose | 0.9 |
| Brain-1 | 10.1 |
| Eye | 2.0 |
| fetal fibroblast | 0.7 |
| venom gland-2 | 1.6 |
| Brain-2 | 1.7 |
| Spleen | 0.3 |
| Lung | 0.6 |
| Liver | 1.0 |
| Kidney | 1.4 |
| Pancreas | 0.8 |
| Small intestine | 0.1 |
| Large intestine | 1.6 |
| Stomach | 2.5 |
| heart | 0.0 |
| ovary | 37.9 |
| cheek muscle | 0.4 |
Transcript
| Transcript ID | habu1_s24_g00209.t1 |
|---|---|
| Definition | - |
>habu1_s24_g00209.t1 atgatctctgctcgaggcgggggctccatgcctccgccgcccaacgccactgcctattaccccccgcctcgcgtgaatct gccctccggcgtggaaatcctgcgcacttactcgggggccttcgtctgcctggagatcgacaaatccattttgttcgcca ttctggaggggaattaatgtgaagagagggataacaagaagctacttaaaacagtgtttttgttcttttattttttccaa tctaataaacgtggaaataaattatgtaaatgctttttggagcactcgtatggatactagtggctgctacaaaagttcct ttgcccctgctgcagggctgggtgatgtttgtatctgtgacagcctgcttcacttccatctccttcctttcggtctttct cttcagttatcgagagagaattgccatcgactggaaccgtttggacaccacatggcgctttgggacacttccgctgctcg tgcagtgctttgggacacttccactgcttgcacagtgctttgggacgcttccgttgctcgcacgcttcaggatgcttctg ttactcatggtaggagaccacgtggcgcttcgggctgtttccgctgcagaaacagcccaaagagccacgcagtgtcctgt cacaagcagcagaaatggcacaaagcaccatgcggcgtcctgccgggaggagcggcaatggcgcaatgtgtcacatagca tccagccgcaagtgacggcaagcggccgcaaaagaagtcaagtagcagcgcgacaggtgttggggcttgggaggcctggc tgcagtggtcctaaggagaaacaaaagctcttagcaaatgtgcaatacattgcatacaggcaatcaagaaagacaacatt agccaaaattaatattgcagtaaaacttaaagaccttgaaggagacaactgtgtttttgatgggattatttatcgaagcg gtgagaccttccagcccaactgtaaataccactgtacctgcagggatggacagatcagctgtgtgcccctctgcaatgtt gatttgttgcttcctggtcctgaatgccccttcccaagaaaagttgaagttcccaaggaatgctgtgaacaatggtcatg tgaccctaaaaaagatgacgctgaagagtttgcaatggcaggattcagacaggaagctaccttgggggctgaaggttctg actcaagttctaactgcattgagcagacaacggaatggagtgcatgttccaccagctgcggcatgggagcctccaccaga gtcaccaacaagaaccccatgtgtgaaatggtgaaagagatgaggctgtgtgaagtgcgcccctgtgaaaagaatccact acctgataagaaggggaaaaaatgtctccgaactataaagcctcccacagctgtccatctggagtaccagaactgcacca gcatccatatgtataaaccccgttactgtggcatctgcaacgatggacggtgctgcactccacacacgacaaaaacaatc caggtggaattccgttgtcctcaaggcaacaccatccaacatcctctgatgtccattactagttgtgtgtgtcacaagaa ctgccctcagaataacaacgcttttgttcgaaagctcagttgaatgagccactcagaaatcaccagactggtcttctgat gctttagtaacatgtatcttctcttttgggggagggaggaaggatcagatgctttgattcccgatcctgtctatcatttg atttctagataaggcatttcagttcctgtggaatttcttttgaaaccctgcttgcttcaaacgttgttttgcgccattaa aatattgtcacttggggtgtata |
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Protein
| Protein ID | habu1_s24_g00209.t1 |
|---|---|
| Definition | - |
>habu1_s24_g00209.t1 MLFGALVWILVAATKVPLPLLQGWVMFVSVTACFTSISFLSVFLFSYRERIAIDWNRLDTTWRFGTLPLLVQCFGTLPLL AQCFGTLPLLARFRMLLLLMVGDHVALRAVSAAETAQRATQCPVTSSRNGTKHHAASCREERQWRNVSHSIQPQVTASGR KRSQVAARQVLGLGRPGCSGPKEKQKLLANVQYIAYRQSRKTTLAKINIAVKLKDLEGDNCVFDGIIYRSGETFQPNCKY HCTCRDGQISCVPLCNVDLLLPGPECPFPRKVEVPKECCEQWSCDPKKDDAEEFAMAGFRQEATLGAEGSDSSSNCIEQT TEWSACSTSCGMGASTRVTNKNPMCEMVKEMRLCEVRPCEKNPLPDKKGKKCLRTIKPPTAVHLEYQNCTSIHMYKPRYC GICNDGRCCTPHTTKTIQVEFRCPQGNTIQHPLMSITSCVCHKNCPQNNNAFVRKLS |
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