Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2513_g09132
Locus habu1_scaffold2513 : 61905 ... 121195 : -
To GenomeBrowser habu1_scaffold2513:61905..121195
Genes list of scaffold habu1_scaffold2513

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s2513_g09132.t1 1 1 RVT_1 32 131 2.2e-06 27.1 5.8e-10 4.3e-06 26.2
habu1_s2513_g09132.t1 1 1 DUF1891 137 178 3.8e-14 51.7 1.2e-17 8.8e-14 50.6

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 0.0
Pit, infrared sensing 0.0
Nose 0.1
Brain-1 0.0
Eye 0.1
fetal fibroblast 0.1
venom gland-2 0.0
Brain-2 0.0
Spleen 0.0
Lung 0.0
Liver 0.0
Kidney 0.0
Pancreas 0.0
Small intestine 0.0
Large intestine 0.0
Stomach 0.0
heart 0.1
ovary 0.0
cheek muscle 0.2

Transcript
Transcript IDhabu1_s2513_g09132.t1
Definition-
>habu1_s2513_g09132.t1
gaggactaaaccggtcgtaagtcgaggactacccaaccggtcgtaagtcgaggactttccctgcccgggagcgccgcaca
tgcgtggttccgccccctgcgccggccgaggcgtagctggcaagtggcagagacggagcaggccgaccaccagctggccc
agcccaagggagctactgttcaccttgatgacccatgactgctgtgccaaatctgctatgaatcatattgtgaagtatgc
agacgacatggcagtggtgggtcttatccgggatgaaagtgaagatgcttatagggaagaggtgaaggctctggtggact
ggtgcaataaaagtaacctggttctaaatgttgataaaacaaaggagatcattgaagattttagaaagagccggcatagt
catattccactcagtatcaaggatgcagctatagaggtggtcaacagtatgaagtatctgggggtgcagatagctaacaa
tctcaactggtctctccacacgtcatccttagtgaagtgtgcaaaccagcatctgcatttcttgcgtcggatgaggagag
cacatctttctccttctgtcctggccactttttacagaggtatgattgagagcattttaacaaactgcatcactgtctgg
tttggtggcagcagggcctcagatagaaagtccatacagagaatggtaaggacaaccaagaagatcataggaagctcaat
tcctgatattcaggatgctgtttataagtgctatgtgcttagagttcaaagcattgttagagaccccacataccgacttt
agggtctgtttctgtttctcccctctggaaggaggtttcaaagtatttctagcaggactaacctattctgtaatagcttt
gttccttatgccatccatctggtaaacttgtaagatttgtttctctctccatgcacatgtatacataacccgaactagac
tgttgtttttctgtgtcatataatatatgtgggtatatgcataattctgtatttatttatttgtttgtttgtttgtttat
ttatttatttttgtcatatttatgtaatgtatattggaggtggtgacactttaagagctctatgcaatgacatttcattt
taatgtatgccgtttagtgtacattcaaagtgacaataaagttattattctattctgttctg

Protein
Protein IDhabu1_s2513_g09132.t1
Definition-
>habu1_s2513_g09132.t1
MRGSAPCAGRGVAGKWQRRSRPTTSWPSPRELLFTLMTHDCCAKSAMNHIVKYADDMAVVGLIRDESEDAYREEVKALVD
WCNKSNLVLNVDKTKEIIEDFRKSRHSHIPLSIKDAAIEVVNSMKYLGVQIANNLNWSLHTSSLVKCANQHLHFLRRMRR
AHLSPSVLATFYRGMIESILTNCITVWFGGSRASDRKSIQRMVRTTKKIIGSSIPDIQDAVYKCYVLRVQSIVRDPTYRL

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