Gene
| Gene Model ID | habu1_s2513_g09137 |
|---|---|
| Locus | habu1_scaffold2513 : 571982 ... 617595 : + |
| To GenomeBrowser | habu1_scaffold2513:571982..617595 |
| Genes list of scaffold | habu1_scaffold2513 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| proto-oncogene c-rel | GO:0001816 GO:0003700 GO:0005667 GO:0045449 GO:0045893 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2513_g09137.t1 | 1 | 1 | RHD | 9 | 177 | 0.0 | 248.5 | 0.0 | 0.0 | 247.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2513_g09137.t1 | gi|602633522|ref|XP_007423639.1| | PREDICTED: proto-oncogene c-Rel [Python bivittatus] | 0.0 |
| habu1_s2513_g09137.t1 | gi|637356349|ref|XP_003227818.2| | PREDICTED: proto-oncogene c-Rel [Anolis carolinensis] | 0.0 |
| habu1_s2513_g09137.t1 | gi|558158250|ref|XP_006122239.1| | PREDICTED: proto-oncogene c-Rel [Pelodiscus sinensis] | 0.0 |
| habu1_s2513_g09137.t1 | gi|564270082|ref|XP_006273807.1| | PREDICTED: proto-oncogene c-Rel [Alligator mississippiensis] | 0.0 |
| habu1_s2513_g09137.t1 | gi|557262596|ref|XP_006016818.1| | PREDICTED: proto-oncogene c-Rel [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.2 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 0.2 |
| Nose | 0.5 |
| Brain-1 | 0.2 |
| Eye | 0.1 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.9 |
| Brain-2 | 0.2 |
| Spleen | 6.9 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.2 |
| Pancreas | 0.0 |
| Small intestine | 0.8 |
| Large intestine | 0.6 |
| Stomach | 0.8 |
| heart | 0.1 |
| ovary | 0.0 |
| cheek muscle | 1.0 |
Transcript
| Transcript ID | habu1_s2513_g09137.t1 |
|---|---|
| Definition | - |
>habu1_s2513_g09137.t1 atacagctcagcctcctcacgttaagcgtttgccgcccaagtgtaaaggcacaggtaggcttggaaaccggagaggaggc gggaggcggtccctcccttgacatttaagaaagaaagttataactgagtgagagacatcagggaagtattttgcctacgt ctcgggaaattccctgacggttaacgaataagcgcacagggaggaagatcctagctgccggacccagacgagcggcgctc agacgcggaacagaaatatctccagacgagacagaggctgccgcctcaacgagaagcagctccgcagacgcgagcctccc ttggacacaacctcagcgggaggaggtcccaccatggccagtggtcatgagccatatattgaaatacatgagcaacctag acaaagagggatgcgttttcgatacaaatgtgaaggaagatcagcaggcagtattccgggtgaacacagtactgatatca accggacgttcccatctatacagatcctgaactactttgggaaagtaaaaatcagaataacattggtaactaagaatgaa ccctataggccgcatcctcaccagttggttggaaaggattgtgaaaatggttactatgaagctgaatttgggccagagcg tagagttttgagttttcagaatctgggcattcaatgtgtgaaaaagagagaactcaaggaatctatcatttcgcgaattg ctaagaagatcaatccattcaatgtttctgaagaacagctgttgacagttgaagaatatgacctcaatgtggtgagactc tgtttccaagcattcatctctgatgagcatggcaactgcacacagcctatatccccagtcatctccaaccccatttatga taaccgtgcacccaattcagctgaattgagaatctgtcgtgtgaacaagaactgtggaacagtgaaaggaggagatgaaa ttttcctcttgtgtgacaaagttcaaaaagatgatatagaagtgagatttttcatgaataactgggaagccaaggggatt ttttcacaagctgatgttcatcgtcaagtagccattgtcttcaagacgcccccatttttcaaagatatcacagatcctgc aaccgtgaagatgcaattgcgaaggccctcagatcaggaagtcagtgaccctatggactttagatatttaccagaggaaa aagacccttatggtcataaggcaaaaaggcagaggtcaccaatggctttacaaaagctcattcaagattctggtccctat gagaggtctaatgctgctctgttccagactgctaccagtgaagaaaaattcattaagaaagaatcaaatatatattgctc accgattgaaacagccattccactgcagaaaacatctacaagcaccccttcattgcagccatattattcccctcctttaa accacttaagttccaatgggcatcctggtccaccttttcaaatgacagagtccattaagcaggatggggttctgccatct tgctggcattcctctgtttcacctttaagtgttttgctgcaacatagaaacttgggtgatgtgttgcatcctacaatgca gaatggtagctctccatttcttggacaggaaaagagtctgaactgggccagtcagaaagaggggaacatttatcaagggt tctttgcaacaatgaatgaccatgagtcaacaatgacatcatcatcaccttcaccatcagtatctcagcaagatatgcag aatgtctccagcactatcgacagccagtctattcatccagtaaatgtggcagtgtccaatggcattagcatggagatgga agactccagatgctcagatgttaacttggaaaagtcatcttttgttcaagctttaaatccaagcaatcacaggaagaaag tccaaccattgctgcctcctgccctatcaacagtaaccacttctagcttatctttgacctctatgtccaatatttttgag acaccaacttttcattatctggctagccttaatgaatcaggattgcccagcaatccaaacaccataaatatatcaaattt tgatacttatagcacccaagatgatgagttcctaaattccattggaagcaattttgatagtatactttaaatataaagtt taattgaagctgactgttg |
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Protein
| Protein ID | habu1_s2513_g09137.t1 |
|---|---|
| Definition | - |
>habu1_s2513_g09137.t1 MASGHEPYIEIHEQPRQRGMRFRYKCEGRSAGSIPGEHSTDINRTFPSIQILNYFGKVKIRITLVTKNEPYRPHPHQLVG KDCENGYYEAEFGPERRVLSFQNLGIQCVKKRELKESIISRIAKKINPFNVSEEQLLTVEEYDLNVVRLCFQAFISDEHG NCTQPISPVISNPIYDNRAPNSAELRICRVNKNCGTVKGGDEIFLLCDKVQKDDIEVRFFMNNWEAKGIFSQADVHRQVA IVFKTPPFFKDITDPATVKMQLRRPSDQEVSDPMDFRYLPEEKDPYGHKAKRQRSPMALQKLIQDSGPYERSNAALFQTA TSEEKFIKKESNIYCSPIETAIPLQKTSTSTPSLQPYYSPPLNHLSSNGHPGPPFQMTESIKQDGVLPSCWHSSVSPLSV LLQHRNLGDVLHPTMQNGSSPFLGQEKSLNWASQKEGNIYQGFFATMNDHESTMTSSSPSPSVSQQDMQNVSSTIDSQSI HPVNVAVSNGISMEMEDSRCSDVNLEKSSFVQALNPSNHRKKVQPLLPPALSTVTTSSLSLTSMSNIFETPTFHYLASLN ESGLPSNPNTINISNFDTYSTQDDEFLNSIGSNFDSIL |
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