Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2598_g09386
Locus habu1_scaffold2598 : 392562 ... 400045 : -
To GenomeBrowser habu1_scaffold2598:392562..400045
Genes list of scaffold habu1_scaffold2598

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 2.1
Venom grand-1 0.5
Pit, infrared sensing 2.2
Nose 2.9
Brain-1 2.7
Eye 3.3
fetal fibroblast 4.5
venom gland-2 4.6
Brain-2 2.9
Spleen 2.3
Lung 2.2
Liver 2.5
Kidney 2.1
Pancreas 1.0
Small intestine 1.5
Large intestine 1.3
Stomach 1.9
heart 4.4
ovary 29.2
cheek muscle 4.0

Transcript
Transcript IDhabu1_s2598_g09386.t1
Definition-
>habu1_s2598_g09386.t1
gtgactctagagcgcatgtgcctaaggcgacgggtgacgcacggggcgcatgccctttcctcaaacttgcctcggtctcc
gctcgtgagttaaggtcaaaggtttcgattccgccggaggcgcgtttgtcgtttttcaacgctggattctcaaattgctg
gtttgtccaaaagcctgccgatcacagttgtgtcgctgattcgagttcagcacggtttcctcctgaataaatctttttcg
aatgcggcttcttattcccaggagggaacctaacttctgggcagaaaaatgactggcaactcaccacaaatgcaaatctg
cccctactgcaaaaagcagtttaaacgtctcaagtctcacctgcctcactgtaagatggcaggtagtgaagattcaagag
aagctttgcctctcttcagaaaagcctgtgattctgttacatctgagcagctaaatactgagaaaaagaaagggcagatc
caaagcttagaaattccccccaaagaagaaagcaaaaaaagtaaaactaacttggttacaaaaaaaggaagaagaaaaaa
tattggagtaattggaacaattgtaaacagtggtctgcctgaagaaaagcaaattaaaagtgctagtgaaaagtcacctc
aaacaagggagaataaaaaaacttcagaagagctttcagcagcagtagataaaaagctgtttctaaagataaacctgcca
gagaaattatccacagtcgaaaaaaccagtagaacccctttacctaaagaagagattatacctaccggtagtcttaattt
agaatcactgatacaaagtggaaaagccacttcagagccacaccagaaaccctgtgtaaaacagaaaccgaacatagagt
catcggtagagcagagtgtgtccctttcaactaataatttcattgagagtcttcaaccagttcctcaagaacttggtgac
agaatagaacaaatcactgcttctcatcatgtgacagcattagaaaacagatgtgaatcctctggtcataatagcctgtt
aaatgaaagtatccttgataacagtaaggcaggacaaaggcctctgaaatcagtgtcaggaggagcaaaccttgccctga
tcaacaggcagcaaattattacaggcagtgtggacaagaagagcactttagaacctgagggaaatgtcaaaaatggaaac
acagaaaatgacatgtccaaaattaaagcatgcacatcacaggaccatgttgtggacaactatggaagggttaccagagg
tccagtccacttgtttaaaagtaagttagatgcaaattctttatttctcaaagcagaggattatcctaaggaacacgtcg
ttgatccagatcttaagcctaatgtgtatcccatattcacagaagttctcagagcaatgggagttgataaaacttctact
agccacttaagtgctgtagagaaaaatactgatttatgctcaagagccactgagacaaaagaaggtaaaaaatcagtgat
gggtttaagaaaaccctcaccccaagagttagaaatgactacttctccagaacaaagcatacaagtatcttcattaggac
tggagtggttcactgaactgtatcccaattaccagaagctgggcttatttttagagagacagtcacaatgggataccaaa
atatcagaagctcacattctgttttgtgacaatcacaaagttcctctggcagaaaagaatctaaaggatatcaaacatca
gggtctgtctccacaggggatacttggagaaacattcagagcctggaatagatacttcagtaggaacatcaatgtgaaaa
agtatggattgcctgggatttctttgctgctgctgggcttgtgtaccctcggctatgcctggagacatgatcacattaaa
tataagcagaggaaatatactgatgaagatacaacagtataaatataagacttgtgtctagtgctcaatcatggacgtta
ccttgggtctggccagtaaagtggatattaccagtcactgcagaagttacatgaaaatattttgatagtaacttggcatc
tctttagaaaaggtaatctgtcatactatagatattttttgctgataaaaaaaacacctaatttctgtaatcctgccttt
tcttgggcaggatctgatgtccattttgcagtgttatttgagattccctttcatctgtggagtgtggagacagcgctctc
tggaatgtcctctgacacctggggggctcagttcaggtccttcctggatcctgcaagtgctgggagtggaaaaacactca
gacatcccagtaggatacattagggcttgattatctcccctgtcctgttaaacttttgtgtgaaacttctgggagagatc
ctcctttgggtttgggcaaggtgccatcagtatgctgttgagccatagctctccattaccctggaagcttaattggaagt
attgtggaagtcctgacttaaatggaacaaagccaactaaattgaaacccagcaagacagagttactgttttttctttta
ttgtgaggcaaggtggttccttacatagccaggctgcaagccctttttagctttgaattctgaaaccaactttttgaatt
acatagatgtagaaaatgattgccaactaatgcagatctttatattctagagtaaacttcattgttttcatctagctg
Transcript IDhabu1_s2598_g09386.t2
Definition-
>habu1_s2598_g09386.t2
gtgactctagagcgcatgtgcctaaggcgacgggtgacgcacggggcgcatgccctttcctcaaacttgcctcggtctcc
gctcgtgagttaaggtcaaaggtttcgattccgccggaggcgcgtttgtcgtttttcaacgctggattctcaaattgctg
gtttgtccaaaagcctgccgatcacagttgtgtcgctgattcgagttcagcacggtttcctcctgaataaatctttttcg
aatgcggcttcttattcccaggagggaacctaacttctgggcagaaaaatgactggcaactcaccacaaatgcaaatctg
cccctactgcaaaaagcagtttaaacgtctcaagtctcacctgcctcactgtaagatggcaggtagtgaagattcaagag
aagctttgcctctcttcagaaaagcctgtgattctgttacatctgagcagctaaatactgagaaaaagaaagggcagatc
caaagcttagaaattccccccaaagaagaaagcaaaaaaagtaaaactaacttggttacaaaaaaaggaagaagaaaaaa
tattggagtaattggaacaattgtaaacagtggtctgcctgaagaaaagcaaattaaaagtgctagtgaaaagtcacctc
aaacaagggagaataaaaaaacttcagaagagctttcagcagcagtagataaaaagctgtttctaaagataaacctgcca
gagaaattatccacagtcgaaaaaaccagtagaacccctttacctaaagaagagattatacctaccggtagtcttaattt
agaatcactgatacaaagtggaaaagccacttcagagccacaccagaaaccctgtgtaaaacagaaaccgaacatagagt
catcggtagagcagagtgtgtccctttcaactaataatttcattgagagtcttcaaccagttcctcaagaacttggtgac
agaatagaacaaatcactgcttctcatcatgtgacagcattagaaaacagatgtgaatcctctggtcataatagcctgtt
aaatgaaagtatccttgataacagtaaggcaggacaaaggcctctgaaatcagtgtcaggaggagcaaaccttgccctga
tcaacaggcagcaaattattacaggcagtgtggacaagaagagcactttagaacctgagggaaatgtcaaaaatggaaac
acagaaaatgacatgtccaaaattaaagcatgcacatcacaggaccatgttgtggacaactatggaagggttaccagagg
tccagtccacttgtttaaaattcctctggcagaaaagaatctaaaggatatcaaacatcagggtctgtctccacagggga
tacttggagaaacattcagagcctggaatagatacttcagtaggaacatcaatgtgaaaaagtatggattgcctgggatt
tctttgctgctgctgggcttgtgtaccctcggctatgcctggagacatgatcacattaaatataagcagaggaaatatac
tgatgaagatacaacagtataaatataagacttgtgtctagtgctcaatcatggacgttaccttgggtctggccagtaaa
gtggatattaccagtcactgcagaagttacatgaaaatattttgatagtaacttggcatctctttagaaaaggtaatctg
tcatactatagatattttttgctgataaaaaaaacacctaatttctgtaatcctgccttttcttgggcaggatctgatgt
ccattttgcagtgttatttgagattccctttcatctgtggagtgtggagacagcgctctctggaatgtcctctgacacct
ggggggctcagttcaggtccttcctggatcctgcaagtgctgggagtggaaaaacactcagacatcccagtaggatacat
tagggcttgattatctcccctgtcctgttaaacttttgtgtgaaacttctgggagagatcctcctttgggtttgggcaag
gtgccatcagtatgctgttgagccatagctctccattaccctggaagcttaattggaagtattgtggaagtcctgactta
aatggaacaaagccaactaaattgaaacccagcaagacagagttactgttttttcttttattgtgaggcaaggtggttcc
ttacatagccaggctgcaagccctttttagctttgaattctgaaaccaactttttgaattacatagatgtagaaaatgat
tgccaactaatgcagatctttatattctagagtaaacttcattgttttcatctagctg
Transcript IDhabu1_s2598_g09386.t3
Definition-
>habu1_s2598_g09386.t3
gtgactctagagcgcatgtgcctaaggcgacgggtgacgcacggggcgcatgccctttcctcaaacttgcctcggtctcc
gctcgtgagttaaggtcaaaggtttcgattccgccggaggcgcgtttgtcgtttttcaacgctggattctcaaattgctg
gtttgtccaaaagcctgccgatcacagttgtgtcgctgattcgagttcagcacggtttcctcctgaataaatctttttcg
aatgcggcttcttattcccaggagggaacctaacttctgggcagaaaaatgactggcaactcaccacaaatgcaaatctg
cccctactgcaaaaagcagtttaaacgtctcaagtctcacctgcctcactgtaagatggcaggtagtgaagattcaagag
aagctttgcctctcttcagaaaagcctgtgattctgttacatctgagcagctaaatactgagaaaaagaaagggcagatc
caaagcttagaaattccccccaaagaagaaagcaaaaaaagtaaaactaacttggttacaaaaaaaggaagaagaaaaaa
tattggagtaattggaacaattgtaaacagtggtctgcctgaagaaaagcaaattaaaagtgctagtgaaaagtcacctc
aaacaagggagaataaaaaaacttcagaagagctttcagcagcagtagataaaaagctgtttctaaagataaacctgcca
gagaaattatccacagtcgaaaaaaccagtagaacccctttacctaaagaagagattatacctaccggtagtcttaattt
agaatcactgatacaaagtggaaaagccacttcagagccacaccagaaaccctgtgtaaaacagaaaccgaacatagagt
catcggtagagcagagtgtgtccctttcaactaataatttcattgagagtcttcaaccagttcctcaagaacttggtgac
agaatagaacaaatcactgcttctcatcatgtgacagcattagaaaacagatgtgaatcctctggtcataatagcctgtt
aaatgaaagtatccttgataacagtaaggcaggacaaaggcctctgaaatcagtgtcaggaggagcaaaccttgccctga
tcaacaggcagcaaattattacaggcagtgtggacaagaagagcactttagaacctgagggaaatgtcaaaaatggaaac
acagaaaatgacatgtccaaaattaaagcatgcacatcacaggaccatgttgtggacaactatggaagggttaccagagg
tccagtccacttgtttaaaacctggaatagatacttcagtaggaacatcaatgtgaaaaagtatggattgcctgggattt
ctttgctgctgctgggcttgtgtaccctcggctatgcctggagacatgatcacattaaatataagcagaggaaatatact
gatgaagatacaacagtataaatataagacttgtgtctagtgctcaatcatggacgttaccttgggtctggccagtaaag
tggatattaccagtcactgcagaagttacatgaaaatattttgatagtaacttggcatctctttagaaaaggtaatctgt
catactatagatattttttgctgataaaaaaaacacctaatttctgtaatcctgccttttcttgggcaggatctgatgtc
cattttgcagtgttatttgagattccctttcatctgtggagtgtggagacagcgctctctggaatgtcctctgacacctg
gggggctcagttcaggtccttcctggatcctgcaagtgctgggagtggaaaaacactcagacatcccagtaggatacatt
agggcttgattatctcccctgtcctgttaaacttttgtgtgaaacttctgggagagatcctcctttgggtttgggcaagg
tgccatcagtatgctgttgagccatagctctccattaccctggaagcttaattggaagtattgtggaagtcctgacttaa
atggaacaaagccaactaaattgaaacccagcaagacagagttactgttttttcttttattgtgaggcaaggtggttcct
tacatagccaggctgcaagccctttttagctttgaattctgaaaccaactttttgaattacatagatgtagaaaatgatt
gccaactaatgcagatctttatattctagagtaaacttcattgttttcatctagctg

Protein
Protein IDhabu1_s2598_g09386.t1
Definition-
>habu1_s2598_g09386.t1
MTGNSPQMQICPYCKKQFKRLKSHLPHCKMAGSEDSREALPLFRKACDSVTSEQLNTEKKKGQIQSLEIPPKEESKKSKT
NLVTKKGRRKNIGVIGTIVNSGLPEEKQIKSASEKSPQTRENKKTSEELSAAVDKKLFLKINLPEKLSTVEKTSRTPLPK
EEIIPTGSLNLESLIQSGKATSEPHQKPCVKQKPNIESSVEQSVSLSTNNFIESLQPVPQELGDRIEQITASHHVTALEN
RCESSGHNSLLNESILDNSKAGQRPLKSVSGGANLALINRQQIITGSVDKKSTLEPEGNVKNGNTENDMSKIKACTSQDH
VVDNYGRVTRGPVHLFKSKLDANSLFLKAEDYPKEHVVDPDLKPNVYPIFTEVLRAMGVDKTSTSHLSAVEKNTDLCSRA
TETKEGKKSVMGLRKPSPQELEMTTSPEQSIQVSSLGLEWFTELYPNYQKLGLFLERQSQWDTKISEAHILFCDNHKVPL
AEKNLKDIKHQGLSPQGILGETFRAWNRYFSRNINVKKYGLPGISLLLLGLCTLGYAWRHDHIKYKQRKYTDEDTTV
Protein IDhabu1_s2598_g09386.t2
Definition-
>habu1_s2598_g09386.t2
MTGNSPQMQICPYCKKQFKRLKSHLPHCKMAGSEDSREALPLFRKACDSVTSEQLNTEKKKGQIQSLEIPPKEESKKSKT
NLVTKKGRRKNIGVIGTIVNSGLPEEKQIKSASEKSPQTRENKKTSEELSAAVDKKLFLKINLPEKLSTVEKTSRTPLPK
EEIIPTGSLNLESLIQSGKATSEPHQKPCVKQKPNIESSVEQSVSLSTNNFIESLQPVPQELGDRIEQITASHHVTALEN
RCESSGHNSLLNESILDNSKAGQRPLKSVSGGANLALINRQQIITGSVDKKSTLEPEGNVKNGNTENDMSKIKACTSQDH
VVDNYGRVTRGPVHLFKIPLAEKNLKDIKHQGLSPQGILGETFRAWNRYFSRNINVKKYGLPGISLLLLGLCTLGYAWRH
DHIKYKQRKYTDEDTTV
Protein IDhabu1_s2598_g09386.t3
Definition-
>habu1_s2598_g09386.t3
MTGNSPQMQICPYCKKQFKRLKSHLPHCKMAGSEDSREALPLFRKACDSVTSEQLNTEKKKGQIQSLEIPPKEESKKSKT
NLVTKKGRRKNIGVIGTIVNSGLPEEKQIKSASEKSPQTRENKKTSEELSAAVDKKLFLKINLPEKLSTVEKTSRTPLPK
EEIIPTGSLNLESLIQSGKATSEPHQKPCVKQKPNIESSVEQSVSLSTNNFIESLQPVPQELGDRIEQITASHHVTALEN
RCESSGHNSLLNESILDNSKAGQRPLKSVSGGANLALINRQQIITGSVDKKSTLEPEGNVKNGNTENDMSKIKACTSQDH
VVDNYGRVTRGPVHLFKTWNRYFSRNINVKKYGLPGISLLLLGLCTLGYAWRHDHIKYKQRKYTDEDTTV

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