Gene
| Gene Model ID | habu1_s2598_g09389 |
|---|---|
| Locus | habu1_scaffold2598 : 453776 ... 458073 : - |
| To GenomeBrowser | habu1_scaffold2598:453776..458073 |
| Genes list of scaffold | habu1_scaffold2598 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| somatostatin receptor type 2 | GO:0004994 GO:0005886 GO:0007193 GO:0007218 GO:0007268 GO:0016021 GO:0030165 GO:0038170 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2598_g09389.t1 | 1 | 1 | 7TM_GPCR_Srx | 55 | 263 | 2.3e-07 | 30.2 | 9.2e-11 | 2.3e-07 | 30.2 |
| habu1_s2598_g09389.t1 | 1 | 1 | 7TM_GPCR_Srsx | 58 | 329 | 6.5e-16 | 58.2 | 3.6e-19 | 8.8e-16 | 57.8 |
| habu1_s2598_g09389.t1 | 1 | 1 | 7tm_1 | 64 | 315 | 0.0 | 223.8 | 0.0 | 0.0 | 223.8 |
| habu1_s2598_g09389.t1 | 1 | 1 | 7TM_GPCR_Srv | 135 | 327 | 7.3e-10 | 38.4 | 2.9e-13 | 7.3e-10 | 38.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2598_g09389.t1 | gi|602660434|ref|XP_007435882.1| | PREDICTED: somatostatin receptor type 2 [Python bivittatus] | 0.0 |
| habu1_s2598_g09389.t1 | gi|327264566|ref|XP_003217084.1| | PREDICTED: somatostatin receptor type 2 [Anolis carolinensis] | 0.0 |
| habu1_s2598_g09389.t1 | gi|675612661|ref|XP_008935075.1| | PREDICTED: somatostatin receptor type 2 [Merops nubicus] | 0.0 |
| habu1_s2598_g09389.t1 | gi|704317316|ref|XP_010167907.1| | PREDICTED: somatostatin receptor type 2 [Caprimulgus carolinensis] | 0.0 |
| habu1_s2598_g09389.t1 | gi|527243945|ref|XP_005140321.1| | PREDICTED: somatostatin receptor type 2-like [Melopsittacus undulatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.2 |
| Venom grand-1 | 2.7 |
| Pit, infrared sensing | 0.1 |
| Nose | 0.1 |
| Brain-1 | 1.2 |
| Eye | 0.3 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 3.7 |
| Brain-2 | 1.7 |
| Spleen | 0.3 |
| Lung | 0.1 |
| Liver | 10.7 |
| Kidney | 0.0 |
| Pancreas | 0.4 |
| Small intestine | 0.0 |
| Large intestine | 0.1 |
| Stomach | 1.2 |
| heart | 0.3 |
| ovary | 0.0 |
| cheek muscle | 0.2 |
Transcript
| Transcript ID | habu1_s2598_g09389.t1 |
|---|---|
| Definition | - |
>habu1_s2598_g09389.t1 ttcatactataatctcagtggatttgaaaatgacccttccattttacaggtaaatcattttgaaaaacaaaacgcaataa agaattgcttccagtaaatgaggtaatgtttcccttgcaaaaaaaaaaaaaaaagattagctagactaaattgacaatga aattgtatcaatatttaacaagaataagtctcattgaattgagtgaaatatatattcttgtagaagtaaacatagaattg catgtttagagatatctaatattcaccctttattatttgtgtacatattgtggaggggagatttcttgtaaataaaaagt actgtagagtatttgttttgaagaaataccactttatcttagacgaccctgactcaatcaaaatggcctcttcttttgct tgaagaagatttcttgccaggcagacagtgacagcagttgcatcatggatcaggataaccagttgcccaacaccacagtc ttctggttcccctcaacttctcagttcgacagtttctccccagagactcgggctactaatatttccatcaacatcacaag ccaccactatgacttgactagcaatgccatcctcacctttatttactttgtggtgtgcattgtgggcctctgcggaaata ctctggtcatctacgtcatccttcgctatgccaagatgaagacgatcaccaatatctacatccttaatttggctatagcc gatgaactgtttatgttgggcttgcctttcctggctgtgcaggtggctctggttcactggccctttgggaaagtcatctg ccggatcgtcatgacagtggatggaatcaatcagttcaccagcatcttttgcctcacagtcatgagtatggataggtatc ttgctgtagtacaccccataaagtctgctaaatggaggcgcccaagaacagcaaagatggtcaatgtagctgtctggggc atctctcttctggtcatattgcccatcatgatatatgctggagtgatcaataatcacggaaacagtagttgtaccatgat ttggccagatgagtctggtgcttggtacgctggcttcatcatttatgcctttattcttggcttcctagtacccctaacca tcatttgcctttgttaccttttcatcatcatcaaggtgaaatcatctggcattagggtaggttcctccaagaggaaaaag tcagagaaaaaggtcaccaggatggtctccattgttgttgctgttttcatcttttgttggctgcctttctatatctttaa tgtctcatcagtctcggtgtttattgtgccaacacctgtcctcaagggcatgtttgattttgtggtggtcctcacatatg caaatagctgtgccaatcctatcctttacgcctttctgtctgacaacttcaagaagagcttccagaatgttctctgcctg atgaaagttggtggcatggacgaaacggacaggagtgacagcaagcaggataagtccaggctcaatgaagctacagaaac ccagagaacattgctcaatggagaccttcagacaagcatctaagaccccagcagtggtcggatttgaattataattttaa aatgattggacaagcattaaataaacaacaaattccaattctgaaca |
|
Protein
| Protein ID | habu1_s2598_g09389.t1 |
|---|---|
| Definition | - |
>habu1_s2598_g09389.t1 MDQDNQLPNTTVFWFPSTSQFDSFSPETRATNISINITSHHYDLTSNAILTFIYFVVCIVGLCGNTLVIYVILRYAKMKT ITNIYILNLAIADELFMLGLPFLAVQVALVHWPFGKVICRIVMTVDGINQFTSIFCLTVMSMDRYLAVVHPIKSAKWRRP RTAKMVNVAVWGISLLVILPIMIYAGVINNHGNSSCTMIWPDESGAWYAGFIIYAFILGFLVPLTIICLCYLFIIIKVKS SGIRVGSSKRKKSEKKVTRMVSIVVAVFIFCWLPFYIFNVSSVSVFIVPTPVLKGMFDFVVVLTYANSCANPILYAFLSD NFKKSFQNVLCLMKVGGMDETDRSDSKQDKSRLNEATETQRTLLNGDLQTSI |
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