Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2598_g09396
Locus habu1_scaffold2598 : 1508915 ... 1538327 : +
To GenomeBrowser habu1_scaffold2598:1508915..1538327
Genes list of scaffold habu1_scaffold2598

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s2598_g09396.t1 gi|602629626|ref|XP_007421738.1| PREDICTED: uncharacterized protein LOC103064498 [Python bivittatus] 0.0
habu1_s2598_g09396.t1 gi|637332226|ref|XP_008114867.1| PREDICTED: uncharacterized protein LOC103279830 [Anolis carolinensis] 0.0
habu1_s2598_g09396.t1 gi|558189989|ref|XP_006129215.1| PREDICTED: uncharacterized protein LOC102460359 isoform X2 [Pelodiscus sinensis] 0.0
habu1_s2598_g09396.t1 gi|558189985|ref|XP_006129214.1| PREDICTED: uncharacterized protein LOC102460359 isoform X1 [Pelodiscus sinensis] 0.0
habu1_s2598_g09396.t1 gi|632937882|ref|XP_007901415.1| PREDICTED: uncharacterized protein LOC103184955 isoform X1 [Callorhinchus milii] 2.0e-30

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.3
Venom grand-1 0.3
Pit, infrared sensing 0.2
Nose 0.6
Brain-1 0.0
Eye 0.0
fetal fibroblast 0.0
venom gland-2 0.6
Brain-2 0.0
Spleen 0.3
Lung 0.5
Liver 0.0
Kidney 0.1
Pancreas 0.4
Small intestine 0.0
Large intestine 1.7
Stomach 0.0
heart 0.0
ovary 0.0
cheek muscle 0.0

Transcript
Transcript IDhabu1_s2598_g09396.t1
Definition-
>habu1_s2598_g09396.t1
gtcgtaagtcgaggactacccaaccggtcataagtcgaggactttccctgcccgggagtgccgcgcatgcgtggttccgc
cccctgccccggccgaggcgtagctggcaagcggcagagacggagcaggccgaccaccagctggcccagctcaagggagg
caagcctggctgctgtcaagatatgtagcaacaggtgcctgaatatattccatctcattttgataaaaatggccttttcc
tgctgcttcgcctgttgccccttgtttggagagtctccaggagagagggaacctctgaattctcagcattcaagaaaatg
ccaaaggagcagaaatgttaatttcaccaaggggaaaccgcttaccgtgaaacgagtcaatgtgcctgaactggatgcac
tgttcaacagcattgctgagaccttcaataagcagcaagatcattgtttgtctctccaagaagctatacagaccttaaga
aattcctatgactgttcacccacaagcagcctttctgtctgcatagagaagatcttgcaggaacacagtgcttacaatgt
ccaggtgtgtatggaaggatacaggttttggctagaggtgggaatggaggaagtccctaagaaactgaagcagactcagc
agcaggtggggaaactgaactttgccaccaaaggaatagttagtacaacaatagaggaaatgatttgctcagttcatctt
tgccaggagagtttgatggagaaagtgaaagactcatcacccgagtacctagactggatacgtctagaaagcaacctgaa
agaaaatattgagaacataaatcaagcacagaagtattcagaggagtataaagaagaagccaattatgtgctgatgagta
tggcaaaatcagcaaacttgactctgtaaagagaatgagcaagttgcattctatttttcttattcaaaagattcatcaag
ttgcaacagaaaaccccatgcaatataatgtggctacacaagctttttt

Protein
Protein IDhabu1_s2598_g09396.t1
Definition-
>habu1_s2598_g09396.t1
MRGSAPCPGRGVAGKRQRRSRPTTSWPSSREASLAAVKICSNRCLNIFHLILIKMAFSCCFACCPLFGESPGEREPLNSQ
HSRKCQRSRNVNFTKGKPLTVKRVNVPELDALFNSIAETFNKQQDHCLSLQEAIQTLRNSYDCSPTSSLSVCIEKILQEH
SAYNVQVCMEGYRFWLEVGMEEVPKKLKQTQQQVGKLNFATKGIVSTTIEEMICSVHLCQESLMEKVKDSSPEYLDWIRL
ESNLKENIENINQAQKYSEEYKEEANYVLMSMAKSANLTL

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