Gene
Gene Model ID | habu1_s2598_g09398 |
---|---|
Locus | habu1_scaffold2598 : 2032935 ... 2067212 : - |
To GenomeBrowser | habu1_scaffold2598:2032935..2067212 |
Genes list of scaffold | habu1_scaffold2598 |
Annotation by Blast2GO
Annotation | GO |
---|---|
inward rectifier potassium channel 2 | GO:0005242 GO:0005546 GO:0008076 GO:0010107 GO:0014861 GO:0015693 GO:0042802 GO:0051289 GO:0055119 GO:0060306 GO:0086002 GO:0086008 GO:0086013 GO:0086091 GO:0090076 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
habu1_s2598_g09398.t1 | 1 | 1 | IRK_N | 1 | 47 | 1.8e-29 | 101.3 | 8.9e-33 | 3.3e-29 | 100.5 |
habu1_s2598_g09398.t1 | 1 | 1 | IRK | 48 | 376 | 0.0 | 565.5 | 0.0 | 0.0 | 565.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
habu1_s2598_g09398.t1 | gi|602629624|ref|XP_007421737.1| | PREDICTED: inward rectifier potassium channel 2 [Python bivittatus] | 0.0 |
habu1_s2598_g09398.t1 | gi|327279951|ref|XP_003224718.1| | PREDICTED: inward rectifier potassium channel 2 [Anolis carolinensis] | 0.0 |
habu1_s2598_g09398.t1 | gi|326930944|ref|XP_003211597.1| | PREDICTED: inward rectifier potassium channel 2 [Meleagris gallopavo] | 0.0 |
habu1_s2598_g09398.t1 | gi|704259388|ref|XP_010150514.1| | PREDICTED: inward rectifier potassium channel 2, partial [Eurypyga helias] | 0.0 |
habu1_s2598_g09398.t1 | gi|697494757|ref|XP_009677312.1| | PREDICTED: inward rectifier potassium channel 2 [Struthio camelus australis] | 0.0 |
Expression profile
Libraries | FPKM |
---|---|
>Adult | |
Venom fang forming tissue | 0.1 |
Venom grand-1 | 2.2 |
Pit, infrared sensing | 0.6 |
Nose | 1.8 |
Brain-1 | 1.8 |
Eye | 7.7 |
fetal fibroblast | 0.1 |
venom gland-2 | 0.0 |
Brain-2 | 1.2 |
Spleen | 0.3 |
Lung | 0.9 |
Liver | 0.0 |
Kidney | 0.8 |
Pancreas | 0.1 |
Small intestine | 0.8 |
Large intestine | 0.3 |
Stomach | 0.3 |
heart | 0.7 |
ovary | 10.0 |
cheek muscle | 10.8 |
Transcript
Transcript ID | habu1_s2598_g09398.t1 |
---|---|
Definition | - |
>habu1_s2598_g09398.t1 cggcgcaaacccctttgcgtcatgtctcttcctggtagatgattagttctgaatatcagaaggttctccttggcatagtc aagggttgacggaggcaccagcttctccctcattttttttcatctgagtgtgttcaaagaacattcaaaactgtttctcc aaagagttctgcagaaactcagactgttttctaaagcagaagcaccggagtccatatcggaagcgatgggcagcgtgcga accaaccgctacagcatcgtttcctcggaagaggatggtatgaagctagcaactatggcagtggccaacggctttgggaa tgggaagagcaaagtacacaccaggcaacaatgcaggagccggtttgtcaagaaagatggccactgcaacgtccagttca ttaatgtgggtgaaaaaggtcagcgatacctagcagacatctttaccacttgcgtcgacatccgttggagatggatgttg cttatcttctgtctggctttcatcctctcctggctcttctttggttgtgtattttggttgattgccttattgcatgggga cctagaggaagtggagaaaccttgtgtgtctgaggtgcgcagctttactgcagcctttctgttctccattgaaacgcaga ccacaatcggctatggcttcaggtgtgtcacagatgagtgccctattgcagtcttcatggtggttttccaatcaatagtt ggctgcatcattgatgccttcatcatcggtgctgtcatggctaagatggcgaaacccaaaaagagaaatgaaactctcat cttcagtcacaatgcggtagtcgccatgagagatggaaaactgtgcttgatgtggcgggttggtaacctgcgcaaaagcc acttggtggaggcacacgtgagagctcagctcctcaaatcccgaatcaccactgaaggagagtacatccctctagatcaa atagacatcaacgttgggtttgacagcgggatagatcgtatatttttggtctcgcccattacaattgtccacgaaataga tgaagagagccctttatatgacttaagcaagcaagatatggacaatgcagattttgaaatcgtagtgatattagaaggca tggtggaagccacagctatgaccactcagtgccgtagctcgtatctagcaaatgaaatcctgtggggccatcgctacgag ccggtcctgtttgaagaaaagaactattacaaagtggattactcaaggttccacaaaacatacgaagtgccgaacacgcc cctttgcagtgccagagacttagctgagaaaaaatatatcctctcgaatgcaaattcattttgctatgagaatgaagttg cccttgcgggtaaagaagaagaggacagtgacaatggggtgcctgagagcacaagtacggatactcatccagagatggac catcttagccaagcaggggtaaaaatggtcataaaattgggcctgtcgtgtgaagatttactttacaactgcaccaacaa tggaaattctgctcccagttatggtcataagtagaagattacctgtacttttacctggttttaattcgtggtcctgtttt ggaacatacaccacagagaaatctatcagatttattgctgcttccctgtaatctgatgattctttaggaagcatttacca gcatttgttttacattacagggacagcctctctatctgaaaatctgccagtctgatggttatctaatccagtgcactaag gaaaagctgatcatttgtttttctgcctttttttgagaagaaagtctatcaacattcacgctgcaatataagctgcatgg cgagagagtggt |
Protein
Protein ID | habu1_s2598_g09398.t1 |
---|---|
Definition | - |
>habu1_s2598_g09398.t1 MGSVRTNRYSIVSSEEDGMKLATMAVANGFGNGKSKVHTRQQCRSRFVKKDGHCNVQFINVGEKGQRYLADIFTTCVDIR WRWMLLIFCLAFILSWLFFGCVFWLIALLHGDLEEVEKPCVSEVRSFTAAFLFSIETQTTIGYGFRCVTDECPIAVFMVV FQSIVGCIIDAFIIGAVMAKMAKPKKRNETLIFSHNAVVAMRDGKLCLMWRVGNLRKSHLVEAHVRAQLLKSRITTEGEY IPLDQIDINVGFDSGIDRIFLVSPITIVHEIDEESPLYDLSKQDMDNADFEIVVILEGMVEATAMTTQCRSSYLANEILW GHRYEPVLFEEKNYYKVDYSRFHKTYEVPNTPLCSARDLAEKKYILSNANSFCYENEVALAGKEEEDSDNGVPESTSTDT HPEMDHLSQAGVKMVIKLGLSCEDLLYNCTNNGNSAPSYGHK |