Gene
| Gene Model ID | habu1_s2598_g09398 |
|---|---|
| Locus | habu1_scaffold2598 : 2032935 ... 2067212 : - |
| To GenomeBrowser | habu1_scaffold2598:2032935..2067212 |
| Genes list of scaffold | habu1_scaffold2598 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| inward rectifier potassium channel 2 | GO:0005242 GO:0005546 GO:0008076 GO:0010107 GO:0014861 GO:0015693 GO:0042802 GO:0051289 GO:0055119 GO:0060306 GO:0086002 GO:0086008 GO:0086013 GO:0086091 GO:0090076 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2598_g09398.t1 | 1 | 1 | IRK_N | 1 | 47 | 1.8e-29 | 101.3 | 8.9e-33 | 3.3e-29 | 100.5 |
| habu1_s2598_g09398.t1 | 1 | 1 | IRK | 48 | 376 | 0.0 | 565.5 | 0.0 | 0.0 | 565.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2598_g09398.t1 | gi|602629624|ref|XP_007421737.1| | PREDICTED: inward rectifier potassium channel 2 [Python bivittatus] | 0.0 |
| habu1_s2598_g09398.t1 | gi|327279951|ref|XP_003224718.1| | PREDICTED: inward rectifier potassium channel 2 [Anolis carolinensis] | 0.0 |
| habu1_s2598_g09398.t1 | gi|326930944|ref|XP_003211597.1| | PREDICTED: inward rectifier potassium channel 2 [Meleagris gallopavo] | 0.0 |
| habu1_s2598_g09398.t1 | gi|704259388|ref|XP_010150514.1| | PREDICTED: inward rectifier potassium channel 2, partial [Eurypyga helias] | 0.0 |
| habu1_s2598_g09398.t1 | gi|697494757|ref|XP_009677312.1| | PREDICTED: inward rectifier potassium channel 2 [Struthio camelus australis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 2.2 |
| Pit, infrared sensing | 0.6 |
| Nose | 1.8 |
| Brain-1 | 1.8 |
| Eye | 7.7 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.0 |
| Brain-2 | 1.2 |
| Spleen | 0.3 |
| Lung | 0.9 |
| Liver | 0.0 |
| Kidney | 0.8 |
| Pancreas | 0.1 |
| Small intestine | 0.8 |
| Large intestine | 0.3 |
| Stomach | 0.3 |
| heart | 0.7 |
| ovary | 10.0 |
| cheek muscle | 10.8 |
Transcript
| Transcript ID | habu1_s2598_g09398.t1 |
|---|---|
| Definition | - |
>habu1_s2598_g09398.t1 cggcgcaaacccctttgcgtcatgtctcttcctggtagatgattagttctgaatatcagaaggttctccttggcatagtc aagggttgacggaggcaccagcttctccctcattttttttcatctgagtgtgttcaaagaacattcaaaactgtttctcc aaagagttctgcagaaactcagactgttttctaaagcagaagcaccggagtccatatcggaagcgatgggcagcgtgcga accaaccgctacagcatcgtttcctcggaagaggatggtatgaagctagcaactatggcagtggccaacggctttgggaa tgggaagagcaaagtacacaccaggcaacaatgcaggagccggtttgtcaagaaagatggccactgcaacgtccagttca ttaatgtgggtgaaaaaggtcagcgatacctagcagacatctttaccacttgcgtcgacatccgttggagatggatgttg cttatcttctgtctggctttcatcctctcctggctcttctttggttgtgtattttggttgattgccttattgcatgggga cctagaggaagtggagaaaccttgtgtgtctgaggtgcgcagctttactgcagcctttctgttctccattgaaacgcaga ccacaatcggctatggcttcaggtgtgtcacagatgagtgccctattgcagtcttcatggtggttttccaatcaatagtt ggctgcatcattgatgccttcatcatcggtgctgtcatggctaagatggcgaaacccaaaaagagaaatgaaactctcat cttcagtcacaatgcggtagtcgccatgagagatggaaaactgtgcttgatgtggcgggttggtaacctgcgcaaaagcc acttggtggaggcacacgtgagagctcagctcctcaaatcccgaatcaccactgaaggagagtacatccctctagatcaa atagacatcaacgttgggtttgacagcgggatagatcgtatatttttggtctcgcccattacaattgtccacgaaataga tgaagagagccctttatatgacttaagcaagcaagatatggacaatgcagattttgaaatcgtagtgatattagaaggca tggtggaagccacagctatgaccactcagtgccgtagctcgtatctagcaaatgaaatcctgtggggccatcgctacgag ccggtcctgtttgaagaaaagaactattacaaagtggattactcaaggttccacaaaacatacgaagtgccgaacacgcc cctttgcagtgccagagacttagctgagaaaaaatatatcctctcgaatgcaaattcattttgctatgagaatgaagttg cccttgcgggtaaagaagaagaggacagtgacaatggggtgcctgagagcacaagtacggatactcatccagagatggac catcttagccaagcaggggtaaaaatggtcataaaattgggcctgtcgtgtgaagatttactttacaactgcaccaacaa tggaaattctgctcccagttatggtcataagtagaagattacctgtacttttacctggttttaattcgtggtcctgtttt ggaacatacaccacagagaaatctatcagatttattgctgcttccctgtaatctgatgattctttaggaagcatttacca gcatttgttttacattacagggacagcctctctatctgaaaatctgccagtctgatggttatctaatccagtgcactaag gaaaagctgatcatttgtttttctgcctttttttgagaagaaagtctatcaacattcacgctgcaatataagctgcatgg cgagagagtggt |
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Protein
| Protein ID | habu1_s2598_g09398.t1 |
|---|---|
| Definition | - |
>habu1_s2598_g09398.t1 MGSVRTNRYSIVSSEEDGMKLATMAVANGFGNGKSKVHTRQQCRSRFVKKDGHCNVQFINVGEKGQRYLADIFTTCVDIR WRWMLLIFCLAFILSWLFFGCVFWLIALLHGDLEEVEKPCVSEVRSFTAAFLFSIETQTTIGYGFRCVTDECPIAVFMVV FQSIVGCIIDAFIIGAVMAKMAKPKKRNETLIFSHNAVVAMRDGKLCLMWRVGNLRKSHLVEAHVRAQLLKSRITTEGEY IPLDQIDINVGFDSGIDRIFLVSPITIVHEIDEESPLYDLSKQDMDNADFEIVVILEGMVEATAMTTQCRSSYLANEILW GHRYEPVLFEEKNYYKVDYSRFHKTYEVPNTPLCSARDLAEKKYILSNANSFCYENEVALAGKEEEDSDNGVPESTSTDT HPEMDHLSQAGVKMVIKLGLSCEDLLYNCTNNGNSAPSYGHK |
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