Gene
| Gene Model ID | habu1_s2598_g09401 |
|---|---|
| Locus | habu1_scaffold2598 : 2342912 ... 2465284 : - |
| To GenomeBrowser | habu1_scaffold2598:2342912..2465284 |
| Genes list of scaffold | habu1_scaffold2598 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dual specificity mitogen-activated protein kinase kinase 6 | GO:0000187 GO:0004702 GO:0004708 GO:0005524 GO:0005737 GO:0007178 GO:0009069 GO:0019901 GO:0060048 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2598_g09401.t2 | 1 | 1 | Pkinase | 55 | 313 | 0.0 | 179.4 | 0.0 | 0.0 | 179.2 |
| habu1_s2598_g09401.t2 | 1 | 1 | Pkinase_Tyr | 55 | 309 | 9.5e-38 | 129.7 | 4.99997e-41 | 1.2e-37 | 129.3 |
| habu1_s2598_g09401.t2 | 1 | 1 | Kinase-like | 156 | 258 | 1.3e-06 | 27.5 | 8.2e-10 | 2.0e-06 | 26.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2598_g09401.t2 | gi|363740834|ref|XP_003642396.1| | PREDICTED: dual specificity mitogen-activated protein kinase kinase 6 isoform X1 [Gallus gallus] | 0.0 |
| habu1_s2598_g09401.t2 | gi|558190003|ref|XP_006129218.1| | PREDICTED: dual specificity mitogen-activated protein kinase kinase 6 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.6 |
| Venom grand-1 | 1.4 |
| Pit, infrared sensing | 2.6 |
| Nose | 2.6 |
| Brain-1 | 3.6 |
| Eye | 2.9 |
| fetal fibroblast | 2.4 |
| venom gland-2 | 0.7 |
| Brain-2 | 4.8 |
| Spleen | 2.4 |
| Lung | 2.0 |
| Liver | 6.9 |
| Kidney | 4.0 |
| Pancreas | 0.5 |
| Small intestine | 1.4 |
| Large intestine | 1.8 |
| Stomach | 1.4 |
| heart | 4.0 |
| ovary | 2.3 |
| cheek muscle | 10.1 |
Transcript
| Transcript ID | habu1_s2598_g09401.t1 |
|---|---|
| Definition | - |
>habu1_s2598_g09401.t1 agcaaggctgtccgccatttttttgtccgccattttttccccttttccggcgggtgccttacctcccttgagctgggcca gctggtggtcggcctgctccgtctctgccgcttgccagctacgcctcggccggcgcagggggcggaaccacgcatgcgcg gcgctcccgggcagggaaagtcctcgacttatgaccggatgggtagtcctcgacttacgaccggtttagccctcgactta cgaccggtttctgggaagaaagattgctttggccgcgctggtcttcctttgactgccttccagccccatccaatctcagg caagaagaaaaatccaggcttgaaaattcctaaagaagcatttgaacaaccacagacaagctcaacgccacctagagatt tggattccaaagcgtgcattaatattggagacaagaactttgaagttaaagctgatgacctggagccaatatcagaatta ggacgtggtgcatacggggtggtagagatgatgcgacatatgcccagcgggcaaataatggcagtgaagcgaatccgagc aacagtgaatagccaggaacagaagaggttattgatggacttggacatctctatgagaacagtagactgtcatttcactg ttacgttctatggtgcgctgtttcgggagggtgatgtgtggatttgtatggaattgatggatacctcgctggacaaattc tacaagcaagtcattgacagaggcttaacgattcctgaggatattctagggaaaatagctgtctctattgtaaaagcatt agaacacctacatagtaaactctctgtaattcaccgagatgtcaagccttccaatgtactgattaatacacaaggacagg tgaaaatgtgtgactttggaattagtgggtacctcgttgattctgtggctaagacaatggatgctggctgcaaaccgtat atggcacctgaaagaatcaacccggaactaaaccaaaagggatacagtgtaaaatccgatatttggagtctggggattac aatgattgaattagcaatcttgcggtttccatatgactcctgggggacgccgttccagcagctcaaacaggtagtggaag aaccatcaccacagctccctggagacaagttttcagctgaatttgttgattttacctcacagtgcttgaagaaaaattcc acagaaagacctacatatcccgagctaatgcaacaccccttcttttcctttcatgaatccaaagaaacagatgtggcttc ttttgtcaaactcatcctggaaaactgaaaaatggacttgtacattattttaccctttgatggactggtgggattaagga agagggggtcatggtaggacagccttcatcacaggaaagccagaggagaacttaactggtggccattttcctttnnnttt tgtaaaatcctgaatctccttcccttgaaggcttttttaaagggttctttggtattcatagtgatatagaatgaactgat tagtgaaatgaattttaataagattgtcaaccataaacaaaaaaatacaacaacaacga |
|
| Transcript ID | habu1_s2598_g09401.t2 |
| Definition | - |
>habu1_s2598_g09401.t2 gcgcactaagacactcggatccaagtttggagcttttagctgccagtcctggcccatcatcagaggggaaaatgtctcag agaggcaagaagaaaaatccaggcttgaaaattcctaaagaagcatttgaacaaccacagacaagctcaacgccacctag agatttggattccaaagcgtgcattaatattggagacaagaactttgaagttaaagctgatgacctggagccaatatcag aattaggacgtggtgcatacggggtggtagagatgatgcgacatatgcccagcgggcaaataatggcagtgaagcgaatc cgagcaacagtgaatagccaggaacagaagaggttattgatggacttggacatctctatgagaacagtagactgtcattt cactgttacgttctatggtgcgctgtttcgggagggtgatgtgtggatttgtatggaattgatggatacctcgctggaca aattctacaagcaagtcattgacagaggcttaacgattcctgaggatattctagggaaaatagctgtctctattgtaaaa gcattagaacacctacatagtaaactctctgtaattcaccgagatgtcaagccttccaatgtactgattaatacacaagg acaggtgaaaatgtgtgactttggaattagtgggtacctcgttgattctgtggctaagacaatggatgctggctgcaaac cgtatatggcacctgaaagaatcaacccggaactaaaccaaaagggatacagtgtaaaatccgatatttggagtctgggg attacaatgattgaattagcaatcttgcggtttccatatgactcctgggggacgccgttccagcagctcaaacaggtagt ggaagaaccatcaccacagctccctggagacaagttttcagctgaatttgttgattttacctcacagtgcttgaagaaaa attccacagaaagacctacatatcccgagctaatgcaacaccccttcttttcctttcatgaatccaaagaaacagatgtg gcttcttttgtcaaactcatcctggaaaactgaaaaatggacttgtacattattttaccctttgatggactggtgggatt aaggaagagggggtcatggtaggacagccttcatcacaggaaagccagaggagaacttaactggtggccattttcctttn nnttttgtaaaatcctgaatctccttcccttgaaggcttttttaaagggttctttggtattcatagtgatatagaatgaa ctgattagtgaaatgaattttaataagattgtcaaccataaacaaaaaaatacaacaacaacga |
|
Protein
| Protein ID | habu1_s2598_g09401.t1 |
|---|---|
| Definition | - |
>habu1_s2598_g09401.t1 MRGAPGQGKSSTYDRMGSPRLTTGLALDLRPVSGKKDCFGRAGLPLTAFQPHPISGKKKNPGLKIPKEAFEQPQTSSTPP RDLDSKACINIGDKNFEVKADDLEPISELGRGAYGVVEMMRHMPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCH FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDRGLTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINTQ GQVKMCDFGISGYLVDSVAKTMDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV VEEPSPQLPGDKFSAEFVDFTSQCLKKNSTERPTYPELMQHPFFSFHESKETDVASFVKLILEN |
|
| Protein ID | habu1_s2598_g09401.t2 |
| Definition | - |
>habu1_s2598_g09401.t2 MSQRGKKKNPGLKIPKEAFEQPQTSSTPPRDLDSKACINIGDKNFEVKADDLEPISELGRGAYGVVEMMRHMPSGQIMAV KRIRATVNSQEQKRLLMDLDISMRTVDCHFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDRGLTIPEDILGKIAVS IVKALEHLHSKLSVIHRDVKPSNVLINTQGQVKMCDFGISGYLVDSVAKTMDAGCKPYMAPERINPELNQKGYSVKSDIW SLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPGDKFSAEFVDFTSQCLKKNSTERPTYPELMQHPFFSFHESKE TDVASFVKLILEN |
|