Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2598_g09404
Locus habu1_scaffold2598 : 2618086 ... 2695104 : -
To GenomeBrowser habu1_scaffold2598:2618086..2695104
Genes list of scaffold habu1_scaffold2598

Annotation by Blast2GO
Annotation GO
atp-binding cassette sub-family a member 10-like isoform x1 GO:0000166

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s2598_g09404.t1 2 1 ABC2_membrane_3 42 417 1.8e-29 102.8 1.4e-26 9.9e-24 84.0
habu1_s2598_g09404.t1 2 1 ABC_tran 499 645 0.0 191.4 2.0e-28 1.4e-25 90.1
habu1_s2598_g09404.t1 2 1 AAA_21 511 672 4.3e-18 66.3 4.1e-12 2.9e-09 37.3
habu1_s2598_g09404.t1 2 2 ABC2_membrane_3 1022 1216 1.8e-29 102.8 1.8e-08 1.2e-05 24.4
habu1_s2598_g09404.t1 1 1 DUF258 1301 1354 3.4e-08 32.8 7.4e-06 0.0053 15.9
habu1_s2598_g09404.t1 2 2 ABC_tran 1311 1451 0.0 191.4 3.9e-31 2.8e-28 98.9
habu1_s2598_g09404.t1 2 2 AAA_21 1431 1482 4.3e-18 66.3 6.3e-06 0.0045 17.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s2598_g09404.t1 gi|602629564|ref|XP_007421708.1| PREDICTED: ATP-binding cassette sub-family A member 9-like [Python bivittatus] 0.0
habu1_s2598_g09404.t1 gi|637361018|ref|XP_008120205.1| PREDICTED: ATP-binding cassette sub-family A member 10-like isoform X1 [Anolis carolinensis] 0.0
habu1_s2598_g09404.t1 gi|637361031|ref|XP_008120208.1| PREDICTED: ATP-binding cassette sub-family A member 10-like isoform X2 [Anolis carolinensis] 0.0
habu1_s2598_g09404.t1 gi|641760464|ref|XP_008165951.1| PREDICTED: uncharacterized protein LOC101950163 [Chrysemys picta bellii] 0.0
habu1_s2598_g09404.t1 gi|558190007|ref|XP_006129219.1| PREDICTED: ATP-binding cassette sub-family A member 9-like [Pelodiscus sinensis] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 1.3
Venom grand-1 3.0
Pit, infrared sensing 3.2
Nose 1.3
Brain-1 0.9
Eye 1.4
fetal fibroblast 0.0
venom gland-2 1.1
Brain-2 5.3
Spleen 0.7
Lung 4.0
Liver 60.4
Kidney 0.5
Pancreas 0.7
Small intestine 0.7
Large intestine 3.6
Stomach 2.5
heart 1.2
ovary 0.1
cheek muscle 6.3

Transcript
Transcript IDhabu1_s2598_g09404.t1
Definition-
>habu1_s2598_g09404.t1
tcgacgaagtctcattcgtcatcttcaggctgtgtatatatatatgtatgtgtgtatgtatgtgtgtatatatatatgtt
aataagttatttgtctctctcaaactctggaatataacctaagttctttttcagagatccagctatgtgaacatttatga
aaccttcaaaacaaagacatctgttcagctgtcctgagagggaaaaatgggaggagagaaaataagagccaaagtattgt
gaaagactgtggctttttgtctgggttaatgaattgaaggaatgaacacataaaaaaaaaagctgttgtagaattttttt
ttctcaaacaaatcacattccagatggacattggtttgattctgtagctatctttaattcctttcctccattttttgttc
aaattgcttaagccttaccatgcagatggagtacatgcgaaaaagaagcgtgtgtcaacagactgcggcgctcttgtgga
aaaatataattctgaaatggaggatgagaatgcagagttttcaggaattgttttcttccctggttgtcttcagtataata
ctgttagcaacatttggattattaattgaggatgctggcgaaatacctcatgctcttcttgggaaaccttcatttaatat
tactgaagttaaaattttgtatgctccaaatactaagatgtcaagagaaataatgaagaaaatagaaatactttctcctc
taaaaggtgttgagacaaaagtgatggaagatgagaagactatgaaagatgagatggccattgcatcagagcaggactcg
gacttagatattattggagttatatttcaagatgaaatttcctatcgactcagatttcctgtctacagaacagttaaccc
acacaaagatcttgctgttatagatacctgtttcaacttttcctcaatttactgtaaaaatccaacgtattggactcaag
gctttgtctcactgcaatctagcattgatagtgcacttattgaaaggatcaccaatcactctgtttgggaagaaatgagt
tctattaatggcatccgtatgagatcgccttctgtttccatggcatttgaattagcaaatggtgtgttcctttggatctt
atcactgtgttttgctccatttatgtatttcttggcactaactctttcaagagagaaacggaaattaaaggaggtgatga
agacaatgggactacgagatgcagcattctggctctcctggggtttgctgtacaccatgtacatcacaattctaagcatg
gtgctgacattttatttgaaagctacatatttttacctaagcagcaattctacattatttgtcctgcttttcctttatgg
catttcatctatatgtttctgtttcatgttgagctctctcctaaagaagcccagaatcactagctctgtaattttcatct
tcattttttgtttgggagccctcaacgtacctacagccattaggttgatacctccaagtttggagttgattttgagcatc
ttctgcccatttgcttttggtgctggactttcaaaggttctctattttcaaaaatatggaagcacctttgattttaccaa
cttaatggtcgaaccatatggttattgcttgcttattgacagccttttatacatgctgctggctttctattttgataagg
ttgtgcctgacaaatatggggtaccttatcctccattgtttttcttgaagaagacctattggtgtaaacccaaaaggccc
tatactggtgatgttcctacaaacgaagggagtcatgggagtatcttcagtgacaatgctgaacctgtgcctcctgagtt
tgatgggaaggaagccataagactaaataacattaaaaaaatttataaaatgaaaagcacagaaacagaagctttgaaag
gattgtccttggatatttacgaaggtcagatcactgcaatacttggtcatagcgcatctggaaaaactacattgctaaac
attctcagtggactttccaaaccatctgatggttttgcatccatatacacgtacaatatatgtgaaaaggaacacatgga
aaagatttgggaaataagtgctatctgtccacaattcaatattcagtttgaatttttaacagtgaaagaaaacttaaaga
catttgctaaaataaaagggataccatccaatgctgtagaaaaagaggttgaaaaattgttgacgctcttggacatcaaa
gccattcaaaacacccaagctagtcatttaagtggtggacaaaaacgaaaattatctcttgggattacatttttagggga
accacaggtattactattagatgagccaactgctggattggatccatattctagacaccaagtgtggtctctcctgaatg
aacgcaaagcagatcgagtcattttattcactacccagttcatggatgaagctgatatcctttctgaccggaaagctatt
atctcacatgggaggctgcagtgtgttggttcatctctgttcttgaagaaaaaatgggggcttggctatcatttaaggat
gcatacaaatgagttttgtaactttgagagaataacatcactggtcaaacaccacatccctgctgcaaaaaaatcaggac
aacatgaaaatgagctgagctataccctgcccttacaaaatgtggataagttttcagatttgttcagtgatatggatcat
cagacagacctaggacttattaattatggagttaccacgacgactctggaagatgtcttcttgaagctagaaggaaatga
aaacatgaaagaagaagattttggaatccttcatggatgggaagcggcaggaaaggatgaaatgaaacgggatcagctgt
tgctctcagacacgggaaaggtgaccatgaaaggcagagagctctggagacaacaagtttatgccattgcaagaatgcac
tttctaaacctcaagagagagagcaaaatctggggaaccttgctgctacttactggaattatgttagcaccttatattac
ccaaatgatcagctactctgtttggttgaatcttcaatatgaagagattcatcctgggctttattttgagccagggaaag
agtttttcagagggacatcaggacttctggtccttaataatacaggtgaaaaaattgataattttatccaggcactgaag
agtcaaaacatcctgatggacgtcatctctggtaacatagtcagtgaccagctggttcacaatggggccataaaagtaga
ccttgaaaacaagaaatacaagttcacacttatgtgccatatggagataactaactgctttcctgtgcttgtcaacatca
tcagcaatgcatttttgcatatgtttaattctactgcccatcttcgaacctggaatcatgtatttatcagtattgattta
aattctgaattctggatgttaatggaaatttatataattgcggcctcagtcgtattacctgcttttccaccacaatttgc
aatgcgaagtaatgaagattacatgataagaactcgttcccagctgcgaatcgcaggactttttccttctgcctactggt
gtggacaagctctggtggatatgcccctgcattgccttctacttcttttagttctttggccgtggtttttaaaaatagga
gttacaagccctcactttatacccagattgattttctgcttggtggcatttttccttggctacagtatatcgattgtttt
attcctatacataattgccttcgtatttcgccaaaaaaagcatgctgccagtttttggtcagtcatctctattttagtca
tgctgcttttgttcttaataaatatcgtgacaagttcaattacacagcactacataagctacctgttatgtttttttgtt
cctatgtttctagttacgacttttataatttcttttacaactctgctggaaggcttttatattgatgaaggtgatatgtc
aaatcagacacagctctttatatctactttcatgccctacttgcagggtataatcttcatgtttttactgcgttatctgg
tgatgaaatatgaccagactgttatgagaagagatcccatttttaggatttctccacagagaaaaagaacccatcagaat
cctgaagagctcagccaagcagatgacaaagatgtccttgatgaaaggacaagagctcagagtgcactggcttctctcaa
tgaagaagagaaaccagttatcattgtccatgacttgcgcaaggaatacaaacatgggaagactttttcctcttgtttga
agaagaaggaagaaaaaaaagtagctaccagaaacgtctccttttgtgttaaaaaaggagaaattttagggcttctggga
cccaatggagctggtaaaagtacaacaattaacttgataacaggggacacagagccaagtgcaggacaggtgcagattaa
gggagctgatttagctgcgacagaagaaaatgttgctcttggctactgtcctcaggagaatgcactctggtccaatttga
ccatgaaagaacatttggagatttttgcagccgtaaaaggaataaggaaagatgatgctattatggccattaatcgaata
tctcaagctctagaactccgagggcatttaaaaaagagaataaagactttagcagctggattaaccagaaaactgtgctt
tgctctgagcatgttgggtaatcccactctgatgcttttggatgaaccaaccacaggcctggatccaaaagggaagcgcc
aggtgtggagagcaattcacactatgctgcaggagaaagatgaaggagtcattttgacaactcaccacatggaggaagca
gaggtgttgtgtgaccgaatagctatcatggtgtctggacagctcaggtgccttggttcaattcagtatttgaaaagcaa
atttgggaaaaattatttgctacaaataaaagtaaagggagtagaacaaggagatcttgtgaatactcagattctaaaca
ttttcccacaagcagcacgtcaagaaaggatatccactttgttggtctataagatcccaatggaagatgccctgcctctc
tctagagcctttgccatgctagaagatgctaaacaacacttcagtcttgaagagtacagcttttctttgaacactttgga
acaggtattcctggaactgtgcaaagaacacgagcgagattattttgaattggctccaacttctgtatggagagaactgt
agcaccaacaagatagttgaaagattaatcaactaccgagacaaacaccagtttcttcctccagcaaaaatggaggacaa
ataggttgagcactctgaggaattttgcatctggacattccctggggaaaagatatgccatttctgttgtcttctctctg
tttaacaagtacaccttggtgtcttcagattaacctccatatttatcgtgtctaaagatataacatttctgaatatttca
caactaacagcaaaatgaatgtttctgcactgttttgtttttcatgagaaaaactggaaatggaaatatatttttaaaat
gtattgtttatagcctagcacacaaacatatatagatggcatatctttctcagaatgtgttaatatttttaattcagata
acaattcaaggtatacccagtgtttattgggtggataaataaaccgccatactctaaatacctacagtatgtattgttgc
cctcctcagcttccattttaataaatggtaatagagctgacccaattaactattgtactaggagccattaaatatcatca
caaattgtatgctagtctgcttcttgtgaaatgactagaagaagacatgagcaagcttttttaataagagaaaagcccta
tatgccattgttaaaccattaatcttacagaaaaatatacttttctatctaagggactattttatgtagcctttatagat
taaaaaccagcctttgattgcattctctgtgatatgacttggaaaaaatctgaaaggatctcaatagattattggtgatt
ccagttgactaaacaggtgaaagtggctgctcctcttcagattagacgtaataacagggacaattttcttccccatccta
tggcaggaagggattaagtaaggctgcatcctaacatagactgtctaatttttatattttatattagaaattatcaaaaa
agagcaccactgacctaatttggtgggtcagtgaaaagcagttatgtcacatatagctatatttattagcaccaattggc
taaagagtatatgatggccttcagctcttttgtaagggataaattatctgtcgataaattaccagaagacaaaggtactg

Protein
Protein IDhabu1_s2598_g09404.t1
Definition-
>habu1_s2598_g09404.t1
MQMEYMRKRSVCQQTAALLWKNIILKWRMRMQSFQELFSSLVVFSIILLATFGLLIEDAGEIPHALLGKPSFNITEVKIL
YAPNTKMSREIMKKIEILSPLKGVETKVMEDEKTMKDEMAIASEQDSDLDIIGVIFQDEISYRLRFPVYRTVNPHKDLAV
IDTCFNFSSIYCKNPTYWTQGFVSLQSSIDSALIERITNHSVWEEMSSINGIRMRSPSVSMAFELANGVFLWILSLCFAP
FMYFLALTLSREKRKLKEVMKTMGLRDAAFWLSWGLLYTMYITILSMVLTFYLKATYFYLSSNSTLFVLLFLYGISSICF
CFMLSSLLKKPRITSSVIFIFIFCLGALNVPTAIRLIPPSLELILSIFCPFAFGAGLSKVLYFQKYGSTFDFTNLMVEPY
GYCLLIDSLLYMLLAFYFDKVVPDKYGVPYPPLFFLKKTYWCKPKRPYTGDVPTNEGSHGSIFSDNAEPVPPEFDGKEAI
RLNNIKKIYKMKSTETEALKGLSLDIYEGQITAILGHSASGKTTLLNILSGLSKPSDGFASIYTYNICEKEHMEKIWEIS
AICPQFNIQFEFLTVKENLKTFAKIKGIPSNAVEKEVEKLLTLLDIKAIQNTQASHLSGGQKRKLSLGITFLGEPQVLLL
DEPTAGLDPYSRHQVWSLLNERKADRVILFTTQFMDEADILSDRKAIISHGRLQCVGSSLFLKKKWGLGYHLRMHTNEFC
NFERITSLVKHHIPAAKKSGQHENELSYTLPLQNVDKFSDLFSDMDHQTDLGLINYGVTTTTLEDVFLKLEGNENMKEED
FGILHGWEAAGKDEMKRDQLLLSDTGKVTMKGRELWRQQVYAIARMHFLNLKRESKIWGTLLLLTGIMLAPYITQMISYS
VWLNLQYEEIHPGLYFEPGKEFFRGTSGLLVLNNTGEKIDNFIQALKSQNILMDVISGNIVSDQLVHNGAIKVDLENKKY
KFTLMCHMEITNCFPVLVNIISNAFLHMFNSTAHLRTWNHVFISIDLNSEFWMLMEIYIIAASVVLPAFPPQFAMRSNED
YMIRTRSQLRIAGLFPSAYWCGQALVDMPLHCLLLLLVLWPWFLKIGVTSPHFIPRLIFCLVAFFLGYSISIVLFLYIIA
FVFRQKKHAASFWSVISILVMLLLFLINIVTSSITQHYISYLLCFFVPMFLVTTFIISFTTLLEGFYIDEGDMSNQTQLF
ISTFMPYLQGIIFMFLLRYLVMKYDQTVMRRDPIFRISPQRKRTHQNPEELSQADDKDVLDERTRAQSALASLNEEEKPV
IIVHDLRKEYKHGKTFSSCLKKKEEKKVATRNVSFCVKKGEILGLLGPNGAGKSTTINLITGDTEPSAGQVQIKGADLAA
TEENVALGYCPQENALWSNLTMKEHLEIFAAVKGIRKDDAIMAINRISQALELRGHLKKRIKTLAAGLTRKLCFALSMLG
NPTLMLLDEPTTGLDPKGKRQVWRAIHTMLQEKDEGVILTTHHMEEAEVLCDRIAIMVSGQLRCLGSIQYLKSKFGKNYL
LQIKVKGVEQGDLVNTQILNIFPQAARQERISTLLVYKIPMEDALPLSRAFAMLEDAKQHFSLEEYSFSLNTLEQVFLEL
CKEHERDYFELAPTSVWREL

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